mRNA_H-elongata_contig67584.14367.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: D7G7D7_ECTSI (Acyl_transf_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7D7_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 5.870e-132 Identity = 206/428 (48.13%), Postives = 259/428 (60.51%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGYLWIP--------QAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSM---DEGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVR-----------------DGTVD-----LEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWVRKR 1197
L RL+AQVIPGGF++VD+FF+MSGF +AY+HRYLRLTPTL FVT + WK+LPLLGEG +WWP Q E+C +YWW EI Y++++ PWPPLS GCT +SWYLA+DT YFL+ VP VAL+HR PR + + SC++T ++ GF + V FS + +G Y+VPW+RC YL+G+LCG WH R R+ + DGT LE + PGK + P A++VA+ SA L+ LPVYG+YW YQD +P WADH+YLAF RP WALG+A MC LCF G GGLVNW+LT P W SRLTYC YL H+LLL LY R P+ T LE+AVT+MG G+F G LHL VEAPFRNLES R++
Sbjct: 473 LARLSAQVIPGGFMAVDSFFLMSGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAYIHRYLRLTPTLLFVTLMFWKVLPLLGEGASWWPVAHAQAESCRKYWWTEIAYVSSIFPWPPLSDGCTGVSWYLADDTMYFLLGVPTVALYHRRPRLSATLVFVAAVLSCVFTFVYYGFFQQVSFSIFTRVVNSDGWGTVYAVPWSRCSVYLVGMLCGMAWHTHFRGRIGSSAAGGGDAXXXXXXXXXXXXXXXXXXGDGTEQAAKNPLERLAKPGKYVYWP--AVVVALLSAALMGLPVYGTYWDYQDAKNPNLPPWADHLYLAFGRPTWALGLALMCMLCFCGHGGLVNWLLTRPGWTSLSRLTYCTYLFHTLLLTLLYGTRDQPIELTGLEFAVTYMGIVFGTFLGGTGLHLLVEAPFRNLESMGRRQ 898
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: A0A835Z165_9STRA (Acyltransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z165_9STRA) HSP 1 Score: 256 bits (653), Expect = 3.340e-74 Identity = 158/414 (38.16%), Postives = 208/414 (50.24%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSP--RGYL--WIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLP-RAGTAVAV-----LMLTASCLYTLLWIGFHKGVRFSFLSMDEGVK--------------DAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLES 1182
L RL+AQ I FLSVDTFF +SGFL++ V L KL +P RG W+P YLHR+LR+TPT + W++LPLL GP W + CS+YWW Y++N++PW C + WYLAND Q+ L +PL+ L L RA AV L + ASC + LW+G +GVRF+ D G+ D Y PW+R PY G+L W R V V VA A LL VYG+YW YQDV S + + YLA +R AW+LG+ +C CF+ GG V +L W S+LT+CAYL H ++ W Y P RF E+AVT+MG A+G+FA + L+L VEAP R +E+
Sbjct: 399 LARLSAQAITSAFLSVDTFFYISGFLLTHVTLSKLSAAAPLSRGAALRWLPALYLHRWLRITPTFMAAVLLYWQVLPLLDAGPLW--DFGADDAACSKYWWTNPLYISNLVPWRT-GLPCFPVGWYLANDFQFALAFLPLLLLGQPLRGRAAATAAVAALCALAVAASCAFA-LWLGLAQGVRFTVF--DGGLPAPGAPQSGGYSYWPDYYIRPWSRVVPYAAGVLAALGWR------------------RAAAVATXXXXXXXXXXXXXXXNAAVTVAWAALLGSTVYGTYWAYQDV-PSPISRGENAAYLALARLAWSLGLTALCFQCFANRGGAVQALLAHRAWAPLSKLTFCAYLVHPTVITWFYRAAAGPTRFGEAEFAVTYMGFALGTFAASVPLYLAVEAPLRRVEA 787
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: F0Y4I4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4I4_AURAN) HSP 1 Score: 205 bits (522), Expect = 8.100e-55 Identity = 137/392 (34.95%), Postives = 203/392 (51.79%), Query Frame = 1
Query: 31 QVIPGGFLSVDTFFVMSGFL---VSSVLLPKLDTMSPRGYLWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVL--MLTASCLYTLLWIGFHKGVRFSFLSMDEGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTP-VRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWV 1188
QV+ SVDTFF +SGFL V+S + + T + WIP+AYL RYLRLTP+ AF+ + WK+L + G GP W + +C++ +W + Y+ N++P+ C ++WYL ND Q+FL+ V+L +L A A AVL + AS Y W + + F+ + D Y PWTR PPYL+G+ F++ + + A+E S V G++ A +AVA+A+ V+GSY YQD S +W +H+YLA ++PAWA ++ + CF G G V IL+ PV+ ++LT+ AYL H +L LY V FT + + V F+G + + +HLFVE P NLE V
Sbjct: 300 QVLNAAEFSVDTFFWLSGFLGAFVASKVAARATTCT-----WIPRAYLQRYLRLTPSYAFIVLLWWKVLRVYGSGPVW-AQQRGEYRDCAKTFWTNMLYVNNLVPFHGTEDACYGVAWYLPNDMQFFLLLPGFVSL--KLKSAAAAYAVLGALALASVAYA-WWAAYAFDLSFATFDGGDYFPDYYVRPWTRIPPYLVGVATAFYYADAAKDK---AREPPSARVAYGSL-----------------AAGLAVAAAL-----VFGSYPFYQDA-PSGPAKWKNHLYLALAKPAWACALSLLALPCFFGRGAFVGGILSLPVFAPLAKLTFAAYLIHPAVLDVLYKSSTDARVVFTEVGWYVAFLGVSAIVLLCSLVVHLFVEQPLVNLEKHV 656
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: A0A4D9CVQ6_9STRA (Acyl_transf_3 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVQ6_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.320e-51 Identity = 130/408 (31.86%), Postives = 188/408 (46.08%), Query Frame = 1
Query: 46 GFLSVDTFFVMSGFLVSSVLLPKLDTMSPRG-----YLWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEEN---CSRYWWVEITYLTNVIPW--PPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSF-------LSMDEGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMP--------EWADHI---YLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESW 1185
G LSVDTFF +SGFL S +LL KLD +G Y WIP YLHR+LR+TP F F+ WKI PLL GP A + E N C WW YL ++ PW L C SWYLAND QY+L+ VP L +R PR +CL T + + + ++ ++ + D ++ +S PWTRC Y+IG+L + W+ + + G D + + L V+ VLLA+ +YG + G V+ + W+ +A RP W LG+ + LC++ GG + L P+W S L++C YL H +L + ++R +RF + T+ G S A + L VE PF L+ +
Sbjct: 369 GTLSVDTFFFISGFLASYMLLVKLDKEHAKGLSKPAYKWIPSLYLHRWLRITPAYMFAFFLHWKIAPLLAYGPL---AATVWENNIRPCRGVWWSHFLYLNDIYPWWNQRLGEVCYGHSWYLANDMQYYLL-VPFFCLLYRSPRINGKKLATYAVWACLLTCIIVSWTLTIKDNWSPNSWDGVDGDHYREEGFSRPWTRCSSYMIGILFSYMWYEK----------------KQGNPDGKFHTFQANFLW---------VSGLVLLAVSMYGPHSGSAGVIPCAIAAPGTPCGSNWSPSTRAAIIALLRPTWTLGLGCLSVLCWNNQGGFIQKFLAAPLWFPLSTLSFCIYLVHYTVLTYYISQRTMRIRFELFGFLNTYFGLMAISCGLALFVVLLVEKPFMKLQKY 747
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: A0A6P5A4F0_BRABE (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A4F0_BRABE) HSP 1 Score: 185 bits (470), Expect = 1.700e-51 Identity = 132/378 (34.92%), Postives = 190/378 (50.26%), Query Frame = 1
Query: 55 SVDTFFVMSGFLVSSVLLPKLDTMSPRGYLWIPQA--YLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSMDEGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHI-YLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLE 1179
SVD+FF +SG L++ +LL ++ +G +P Y HRY RLTPT FV + +LP + GP W PA + + NC WW I Y+ N++ C SWYLAND Q+F++ VPLV + +R G AV + +L AS + T + I +H ++ + VK Y P+ R PYL+G+ G+F +I+ KE ST +R V R+ IVA + AV + YG Y G ES+ H+ YL R WA+ + + C+ G GG+V+ IL+W WV SRLTYCAYL H L++ +Y R PV ++ F+G S+ A + + VEAP LE
Sbjct: 6 SVDSFFFLSGLLMTYLLLRQIGKNREKGKS-VPYGMLYFHRYWRLTPTYMFVMMLYVWVLPYMFSGPFWPPAPL--DPNCGDNWWTNILYINNLVN---DDRQCMIWSWYLANDMQFFVIGVPLVYILYRWQILGIAVKLALLLASFITTAV-ISWHYNLK---APGGDPVKY-YDKPYCRIGPYLVGVAVGWFL-VKIKR-----KETKSTTLRQLMV---------------RIGWIVAASCAVAVLYATYGLYQGTAFKTESE------HVLYLTVHRTVWAMALGWVVIACYHGYGGVVDIILSWDAWVPLSRLTYCAYLVHLLVMYAVYLTREVPVHYSMFTMIYFFLGHLTLSYGVAFLVSVAVEAPLLGLE 345
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: C3YTJ1_BRAFL (Acyl_transf_3 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTJ1_BRAFL) HSP 1 Score: 183 bits (464), Expect = 8.050e-49 Identity = 125/398 (31.41%), Postives = 194/398 (48.74%), Query Frame = 1
Query: 19 RLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGY---LWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSMD--EGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWVRKR 1197
+ T Q + F+SVD+FF +SG L + +LL ++ +G W+ Y+HRY RLT AFV + + P + GP +WP + WW I Y+ NV+ GC SWYLAND Q+F++ VPL+ L R G A+ + +L +S + T + I H + S M E ++ Y PW R PYL+G+ G+ + R++G+ T + ++ P V VA A+A+ + +YG+Y G + M + YL+ R W + + M CF G GGLVN L+W +WV SRLTYCAYL H +++ + R + +++L F+G + S+ A + + VEAP LE V ++
Sbjct: 180 QFTFQAVGNAFVSVDSFFFLSGLLTAYLLLKQMQKSREKGQSIPYWM--MYVHRYWRLTMPYAFVLMMWLCVYPYMFVGP-FWPGEALDPGCQGADWWKNILYVNNVVN---PERGCMGWSWYLANDMQFFIIGVPLLYLVFRWRPVGFALKLALLLSSVIATAV-ICLHDKLSPSIFGMGQPEWMEHYYLKPWCRIGPYLVGMAVGW-----LMVRIKGSSVNRKTMM----------------IVAP-VGWAVATATALAVLYGLYGTYHG------TVMTNSENAFYLSVHRAVWGMALGWMVLACFYGYGGLVNSFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTREVTLHYSTLTVIYFFLGNMVLSYGLAFLVSVTVEAPLLGLEKIVFRK 542
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: C3YTJ7_BRAFL (NRF domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTJ7_BRAFL) HSP 1 Score: 184 bits (467), Expect = 3.610e-48 Identity = 129/401 (32.17%), Postives = 194/401 (48.38%), Query Frame = 1
Query: 19 RLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGY---LWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSMDEGVKDA----YSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTE-RLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWVRKR 1197
R + + I GFLSVD+FF +SG L++ ++L +LD G W+ Y+HRY RLTP AF+ + + P + GPA A + C+ WW Y+ N + C +WYLAND Q+F+++VPL+ L R G V++L S T +W+ H ++ + S + DA Y P+ R PYL+G L G+ + R + R KE VAL+ +A+ + VYG Y + + P +YL R AW L +A + C +G GG++N IL+W W+ SRLTYCAYL H +++ Y + R TP+ +T +E F+G + S+A A + + EAP R LE V K+
Sbjct: 360 RFSFEPILNGFLSVDSFFFLSGVLMAYLMLLQLDKYRREGRRFPYWL--LYVHRYWRLTPVYAFILMLWVWVYPYIMTGPA---ATNTPDPGCTNNWWYNFLYINNFLDMVK-GTECMGWTWYLANDMQFFVISVPLIWLTFRYFLVGMITQVVLLLTSFGVT-IWLAIHYNLQPAMSSPGQN-PDAMNLYYQKPYCRIGPYLVGTLLGYLLY-RTRGQFRMHKE---------------------------VALLGWLAATGIGLGVVYGLYNHLTEGVVLSRP--VAVMYLTVHRTAWGLALAWVVFACVNGYGGIINTILSWKAWIPLSRLTYCAYLVHPMVIFIAYQDQRETPIHYTDIELMYYFVGHVVFSYAVAYIVSMMAEAPMRQLEKLVLKQ 722
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: UPI0015FF22FF (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF22FF) HSP 1 Score: 183 bits (464), Expect = 3.650e-48 Identity = 124/398 (31.16%), Postives = 195/398 (48.99%), Query Frame = 1
Query: 19 RLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGY---LWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSF--LSMDEGVKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWVRKR 1197
+ T Q + F+SVD+FF +SG L + +LL ++ +G W+ Y+HRY RLT AFV + + P + GP +WP + WW + Y+ NV+ GC SWYLAND Q+F++ VPL+ L R G A+ + +L +S + T + I H + S +S E ++ Y PW R PYL+G+ G+ + R++G+ T + ++ P V VA A+A+ + +YG+Y G + M + YL+ R W + + M CF G GGLVN L+W +WV SRLTYCAYL H +++ + R + +++L F+G + S+ A + + VEAP LE V ++
Sbjct: 279 QFTFQAVGNAFVSVDSFFFLSGLLTAYLLLKQMQKSREKGQSIPYWM--MYVHRYWRLTMPYAFVLMMWLCVYPYMFVGP-FWPGEALDPGCHGADWWKNLLYVNNVVN---PERGCMGWSWYLANDMQFFIIGVPLLYLIFRWRPVGFALKLALLLSSFIATAV-ICLHDKLSPSIYGMSQPEWMEHYYLKPWCRIGPYLVGMAVGW-----LMVRIKGSSVNRKTMM----------------IVAP-VGWAVATATALAVLYGLYGTYHG------TVMTNSENAFYLSVHRAVWGMALGWMVLACFYGYGGLVNTFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTREVTLHYSTLTVIYFFLGNLVLSYGLAFLVSVTVEAPLLGLEKIVFRK 641
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: UPI001604316C (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604316C) HSP 1 Score: 179 bits (455), Expect = 6.490e-48 Identity = 131/403 (32.51%), Postives = 195/403 (48.39%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGY---LWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVPLVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSMDEGVKDA----YSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALPVYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLLLWLYTE-RLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAPFRNLESWVRKR 1197
+ R + + I GFLSVD+FF +SG L+S ++L +L+ G W+ Y+HRY RLTP AF + + P + GPA A + C+ WW Y+ N + C +WYLAND Q+F+++VPL+ L R G ++L AS T + + H ++ S S + DA Y P+ R PYL+G + G+F + R RG VR M VAL+ +A+ + VYG Y + + P +YL R AW + +A + C +G GG++N IL+W W+ SRLTYCAYL H +++ Y + R TPV +T +E F+G + S+A A + + EAP R LE V K+
Sbjct: 127 MKRFSFEPILNGFLSVDSFFFLSGVLMSYLMLLQLNKYRREGRRFPYWL--LYVHRYWRLTPVYAFTLMLYMWVYPYIMTGPA---ATNTPDPGCTNNWWYNFLYINNFLDMVK-GTECMGWTWYLANDMQFFVISVPLIWLTFRYFLVGMITQAVLLQASFGAT-IGLAIHYNLQPSMSSPGQN-PDAMNLYYQKPYCRIGPYLVGTILGYFLY-----RTRG-------QVR----------------MHKAVALLGWLAATGIGLGVVYGLYNHLTEGVVLSRP--VAVMYLTVHRTAWGVALAWVVFACVNGYGGIINTILSWKAWIPLSRLTYCAYLVHPMVIFIAYQDQRETPVHYTDIELTYYFVGHVVFSYAVAYIVSMMAEAPMRQLEKLVLKQ 491
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Match: F0Y4W3_AURAN (ABC transporter domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4W3_AURAN) HSP 1 Score: 186 bits (471), Expect = 6.960e-48 Identity = 129/395 (32.66%), Postives = 187/395 (47.34%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPK-LDTMSPRGYLWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIIQEENCSRYWWVEITYLTNVIPWPPLSGGCTNISWYLANDTQYFLVAVP---LVALFHRLPRAGTAVAVLMLTASCLYTLLWIGFHKGVRFSFLSMDEG-VKDAYSVPWTRCPPYLIGLLCGFFWHAEIRARLRGAKEEASTNVRDGTVDLEVSSIPGKRLMPPRVALIVAVASAVLLALP-----VYGSYWGYQDVMESQMPEWADHIYLAFSRPAWALGVAGMCALCFSGCGGLVNWILTWPVWVMASRLTYCAYLTHSLLL-LWLYTERLTPVRFTSLEYAVTFMGCAIGSFAGAATLHLFVEAP 1164
L +L+AQV+P +VDTFF++SGFL ++ L L +P W P R RL P A+V WK+ + G G A W M E C YWW + N++PW + C SWY+A D Q ++A+P VA H + R G A + AS ++T W+ K R + ++ + D Y PWTR PPYL+G+ W +E ST + L+ + ++ A A ALP + G+ W A++ YLA S+PAWALGVA + LCF G G +V +L VW A+RLTYCAYL H+ +L + + + + +++ Y VTF+G + +HL VEAP
Sbjct: 301 LRQLSAQVVPAAEFAVDTFFLLSGFLGATSLADAVLAPGAPGLAAWWPALVARRLARLVPAYAYVLLAYWKVQRVAGRG-ALWSGMEYAYELCDEYWWTNALLVNNLVPWG-VDDRCYGPSWYIAVDAQLAVLALPPCVAVAARHGVKR-GVAFLAALAAASTVFT-WWLASTK--RLTLVTFQSSYINDVYIRPWTRAPPYLVGVGAALLW-----------RERRSTPPEEXXXXXXXXXXXXGWLLSLSLGVLAACAFG---ALPFRNASLSGARWR------------AEYAYLALSKPAWALGVAAVALLCFEGRGSVVGAVLDLDVWAPAARLTYCAYLVHAAVLDVVFHADAAQRIHYSAEWYVVTFLGAGAVIVVTSLAVHLLVEAP 663 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67584.14367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67584.14367.1 >prot_H-elongata_contig67584.14367.1 ID=prot_H-elongata_contig67584.14367.1|Name=mRNA_H-elongata_contig67584.14367.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=407bp MRLELPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMSPRGYLWIback to top mRNA from alignment at H-elongata_contig67584:1403..2977- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67584.14367.1 ID=mRNA_H-elongata_contig67584.14367.1|Name=mRNA_H-elongata_contig67584.14367.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1575bp|location=Sequence derived from alignment at H-elongata_contig67584:1403..2977- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67584:1403..2977- >mRNA_H-elongata_contig67584.14367.1 ID=mRNA_H-elongata_contig67584.14367.1|Name=mRNA_H-elongata_contig67584.14367.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2442bp|location=Sequence derived from alignment at H-elongata_contig67584:1403..2977- (Himanthalia elongata Himel1 dioecious)back to top |