prot_H-elongata_contig67453.14354.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67453.14354.1
Unique Nameprot_H-elongata_contig67453.14354.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6N2M2F6_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2M2F6_SALVM)

HSP 1 Score: 58.9 bits (141), Expect = 2.370e-8
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDL 75
            ++P  WW  +G +  P++ K AIR  S+  ++ G E NWS++  +   +  R+  +R   LVFVR NL++Q ++L
Sbjct:  533 LNPVSWWEQFGNV-TPELQKFAIRVLSQCCSATGCERNWSVFEHIHSKKRNRLEHKRLNDLVFVRYNLKIQQRNL 606          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5M7K7_LUPAL (Phosphopyruvate hydratase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5M7K7_LUPAL)

HSP 1 Score: 58.5 bits (140), Expect = 3.250e-8
Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    3 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 73
            P  WW TYG    P++ K+A+R  S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ +
Sbjct:  676 PDQWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 745          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI001035AC53 (uncharacterized protein LOC114271314 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035AC53)

HSP 1 Score: 58.2 bits (139), Expect = 4.420e-8
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLP 76
            M P  WWV +G    P +  +A+R   +  +S+ +E NWS+Y  +   R  +++P RA+ LVFV +NLRL  +  P
Sbjct:  560 MDPHSWWVVHGA-SAPTLQSLALRLFVQPSSSSCAERNWSIYSFIHSMRRNKMTPRRAKDLVFVHSNLRLLSRRTP 634          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5MXA4_LUPAL (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MXA4_LUPAL)

HSP 1 Score: 56.6 bits (135), Expect = 4.850e-8
Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 0
Query:    6 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 73
            WW TYG    P++ K+A+R  S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ +
Sbjct:    5 WWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 71          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A2K3K1Y4_TRIPR (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K1Y4_TRIPR)

HSP 1 Score: 55.5 bits (132), Expect = 6.020e-8
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    6 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 77
            WW  YG    P++ K+AIR  S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ+++  K
Sbjct:    3 WWEMYGTEA-PNLKKLAIRILSQTCSASGCERNWSVFEHIHSKKRNRLEHQKLNDLVFVRYNLRLQNRNQKK 73          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI00092F4EA0 (uncharacterized protein LOC109333975 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F4EA0)

HSP 1 Score: 57.0 bits (136), Expect = 1.090e-7
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    6 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKD 74
            WW TYG    P++ K+A+R  S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ ++
Sbjct:  249 WWETYG-CRAPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQRN 316          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI000E701CD2 (uncharacterized protein LOC113288024 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E701CD2)

HSP 1 Score: 57.0 bits (136), Expect = 1.110e-7
Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    3 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 73
            PA WW +YG    P++ +VA+R  S   ++ G E NWS +  V   R  R+S +R   LV+V+ NLRL ++
Sbjct:  282 PALWWNSYG-YSAPELQRVAVRVLSSTCSATGCERNWSEFEQVHTKRRNRLSQQRLNALVYVKYNLRLNER 351          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5N2L1_LUPAL (BED-type domain-containing protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5N2L1_LUPAL)

HSP 1 Score: 56.6 bits (135), Expect = 1.530e-7
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    3 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 73
            P  WW TY +   P++ K+A+R  S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ +
Sbjct:  435 PDQWWETY-RCCTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLENQKLNDLVFVRYNLRLQQR 504          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6N2KDR5_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KDR5_SALVM)

HSP 1 Score: 56.2 bits (134), Expect = 2.110e-7
Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0
Query:    1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 77
            ++P  WW  +G     ++ K AIR  S+  ++ G E NWS++  +   R  R+  +R   LVFVR NLR+Q ++L K
Sbjct:  527 LNPVAWWEQFGN-DTQELQKFAIRVLSQCCSATGCERNWSVFEFIHSKRRNRLEHKRLNDLVFVRYNLRIQQRNLSK 602          
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A2Z6NFM0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NFM0_TRISU)

HSP 1 Score: 55.1 bits (131), Expect = 5.360e-7
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    3 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 77
            P  WW  YG    P++ K+AI   S+  +++G E NWS++  +   +  R+  ++   LVFVR NLRLQ+++  K
Sbjct:  510 PDQWWEMYGTEA-PNLKKLAIWILSQTCSASGCERNWSVFEHIQSKKRNRLEHQKLNDLVFVRYNLRLQNRNKKK 583          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N2M2F6_SALVM2.370e-834.67Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A6A5M7K7_LUPAL3.250e-838.03Phosphopyruvate hydratase n=1 Tax=Lupinus albus Ta... [more]
UPI001035AC534.420e-836.84uncharacterized protein LOC114271314 n=2 Tax=Camel... [more]
A0A6A5MXA4_LUPAL4.850e-838.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lu... [more]
A0A2K3K1Y4_TRIPR6.020e-837.50Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
UPI00092F4EA01.090e-737.68uncharacterized protein LOC109333975 n=1 Tax=Lupin... [more]
UPI000E701CD21.110e-739.44uncharacterized protein LOC113288024 n=1 Tax=Papav... [more]
A0A6A5N2L1_LUPAL1.530e-736.62BED-type domain-containing protein n=2 Tax=Lupinus... [more]
A0A6N2KDR5_SALVM2.110e-736.36Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A2Z6NFM0_TRISU5.360e-736.00Uncharacterized protein n=1 Tax=Trifolium subterra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67453contigH-elongata_contig67453:2565..2795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67453.14354.1mRNA_H-elongata_contig67453.14354.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67453 2565..2795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67453.14354.1 ID=prot_H-elongata_contig67453.14354.1|Name=mRNA_H-elongata_contig67453.14354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRH
ARISPERARKLVFVRANLRLQDKDLPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf