mRNA_H-elongata_contig670.14303.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig670.14303.1
Unique NamemRNA_H-elongata_contig670.14303.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 1.100e-131
Identity = 248/462 (53.68%), Postives = 307/462 (66.45%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQDRDGEH-LCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPMRANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATKA-------FLNLLPRARNGLLTEDDWRLLATPVPHT-----RQRFNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLE 1347
            LNE QR  Y++V  H + + E  L M VLG AGTGKS+LV AL  +LG  +RRAAPTGMAAFL+ GSTL+SLL+LP+R  R LQG+SLK LQ S  GV+Y+IIDELS VSQ Q AWVDR L Q T   ++  GGIS+I TGD G L P GG  L+   P   L+ EGY AY  F+ V ILD+VQRQTA  A       F+ LLPRAR+G L ++DW LL    P+      +  F D TRLFYSK EV  YNG KLR +   V +V A H+ A A+ AT+D A+GL+R+L+LA+ A+VML+ NL+ ++GL+NGI+G+VV+LV A     P LP +VVV+F   +G  WS   RY RCVPI+ ++T+W   G   R     +LPL LCWAITMHKSQ QT       L  AVIDLG  E   GLTFVCLSRAKRLVDL+++PM F R+  L   PT+K RL E
Sbjct: 1118 LNERQRNCYDVVRDHFENEREEPLRMMVLGTAGTGKSYLVYALSRLLGGFLRRAAPTGMAAFLIAGSTLHSLLRLPVRQGRNLQGQSLKALQNSLTGVKYIIIDELSMVSQSQMAWVDRRLRQGTA-VDKPFGGISLIMTGDLGQLQPVGGTPLYKQNPAAALNVEGYAAYSLFQDVFILDRVQRQTAAAANDDDQRGFIELLPRARDGQLCDEDWDLLLKRQPNRLTAAEKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRT----QLPLRLCWAITMHKSQGQT-------LAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQE 1567          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A6S7G8V4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G8V4_PARCT)

HSP 1 Score: 316 bits (809), Expect = 6.310e-96
Identity = 199/471 (42.25%), Postives = 277/471 (58.81%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQDR---DGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIIL---DKVQRQTATKA-FLNLLPRARNGLLTEDDWRLLATPVPHTRQR---FNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLE-TSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
             +E Q++ YNIV +H D    + E LC+ + G AGTGKS+L+NA+ ++L S+   AA TG AAF + G T++SLLKLP+  R N+ L G+SL +LQ S   + Y+IIDE S + QV F W+D+   Q TG  ++  GG S+I TGDPG LPP   + L+ A+P + + ++G+ AY  F KV+ L    +VQ  T+ +  F +LL R R G  T DDW+LL T  P        F D TRLFYS  +V  YN  +L  +   +  + A HSSA A+  +SD   GL+  +FLA+ ARVMLT NLWS +GL NG  G VVD+++    + P LP  V+V F    GP ++       C+PI  +  TS +  G   RQ    +LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K L   +I+PM + RL+ L     L+ RL E+ RL  L +
Sbjct:  360 FSEMQKLAYNIVKSHFDDTLFEKEPLCLIINGVAGTGKSYLINAIRNLLQSKCAVAATTGKAAFNIRGVTVHSLLKLPVGSRGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGCNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLCDFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNE--NQPLCIPICPITVTSQTEIGFHERQ----QLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSLKSSANLQYRLEEENRLDQLAQ 817          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A7D9JFR3_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFR3_PARCT)

HSP 1 Score: 313 bits (802), Expect = 7.690e-96
Identity = 197/471 (41.83%), Postives = 278/471 (59.02%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQD---RDGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIIL---DKVQRQTATKA-FLNLLPRARNGLLTEDDWRLLATPVPHTRQR---FNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLE-TSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
             +E Q++ Y+IV +H D    + E LC+ + G AGTGKS+L+NA+ ++L S+   AA TG AA+ + G T++SLLKLP+  R N+ L G+SL +LQ S   + Y+IIDE S + QV F W+D+   Q TG  ++  GG S+I TGDPG LPP   + L+ A+P + + ++G+ AY  F KV+ L    +VQ  T+ +  F +LL R R G  T DDW+LL T  P        F D TRLFYS  +V  YN  +L  +   +  + A HSSA A+  +SD   GL+  +FLA+ ARVMLT NLWS +GL NG  G VVD+++    + P LP  V+V F    GP ++ +     C+PI  +  TS +  G   RQ    +LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K L   +I+PM + RL+ L     L+ RL E+ RL  L +
Sbjct:  260 FSEMQKLAYDIVKSHFDDVSSEKEPLCLIINGVAGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGARGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGSNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLCDFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKRISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQYNHQPPDLPIAVIVEFENYRGPVFNESRPL--CIPIYPITVTSQTEIGFHERQ----QLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSLKSSANLQYRLEEENRLDQLAQ 717          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: UPI0010699F95 (ATP-dependent DNA helicase PIF1-like isoform X6 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010699F95)

HSP 1 Score: 304 bits (779), Expect = 7.150e-94
Identity = 194/468 (41.45%), Postives = 272/468 (58.12%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQDRDG-EHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPMRANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATK----AFLNLLPRARNGLLTEDDWRLLATPVPHTR-----QRFNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
            LN+ QR+ ++I+ A    D  E L M V G AGTGK++L++AL  +L  +    A TG+AAF +GG TLYS  +LP+R  R LQG+SL++LQ+   G  +LIIDE+S +     +W+D  L   TGK +   GG+S+I  GD G LPP G + ++ A     +S  G++ Y +F  V+IL++V RQ        AF  LL R R+G +TE DWRLL   + H+R      RF+D  RL++ K  V  YN  KL  +G  ++K++A HS   A  ATSD A GL+  LFL+  A VMLTCNLW+E+GL NG  G V    +A     P LP  V+V F   +GP + +    ++C+P+      W + G   +  SR++LPL L +A+T+HKSQ QT       L  AV+DLGK E  AG TFV  SR + + D++ +PM F RL  + +   LK R   + RLR L E
Sbjct:  133 LNDKQRLAFDIITASMANDECEPLHMIVSGTAGTGKTYLISALKQVLQHQCIVTATTGIAAFSIGGQTLYSAAQLPIREYRELQGDSLQRLQLRLEGKRFLIIDEMSMIGHQMLSWLDNRLRAGTGKEDIPFGGMSIILMGDFGQLPPVGDKPMYIAGNGSVISDHGHSMYLTFDYVVILEQVMRQIGEDPEVVAFRALLMRMRDGQVTEMDWRLL---IQHSRPNVSMDRFSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTKAEVMLTCNLWAEVGLCNGSFGTVEQFWFAENMGPPNLPIAVLVHFPAYSGPAFLQ--ECSKCIPVPPRLFEWMADG---KYLSRQQLPLRLRYAMTIHKSQGQT-------LTKAVVDLGKGERVAGCTFVAASRVRSINDIVFEPMTFDRLKVIGRNKNLKKRQEAERRLRVLAE 585          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A)

HSP 1 Score: 307 bits (786), Expect = 1.310e-93
Identity = 191/466 (40.99%), Postives = 271/466 (58.15%), Query Frame = 1
Query:   13 QRVTYNIVHAHQDRDG---EHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATKA----FLNLLPRARNGLLTEDDWRLLATPVPHTRQR---FNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
            QR+ Y++V+AHQ  D    E LC+ ++G AGTGKS+L+NAL  +L ++    A TG A+F + G T++SLLKLP+  R  + L G++L +LQ     +EY++IDE S + Q  F W+D+   Q TG  ++  GG+S+I  GDPG LPP   + L+ AQP + + ++GY  Y+ F KV+ L   QR   + +    F  LL R R G  T  DW+LL T  P   +    FND TRLFYS  EV  YN ++L  +      + A HSS  A++  SD   GLQ  + +A+ A+VMLT NLW+ +GL NG  G VVD+++A   + P LP  V+VRF    GP  S       CVPI  +  S  +  +  ++  R++LPL L +A+T+HKSQ  T       L  A ID+GK E T G+++V +SR K L  L+I+PM F RL+ +    TL  RL E+ RL  L E
Sbjct:  254 QRLAYDVVNAHQQHDSNDKEPLCLIIIGVAGTGKSYLINALRSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAKDLSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQATGFHDKVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNPIGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQPSCIENISEFNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGP--SLREDLPMCVPICPITVSAQAL-EGVQE--RQQLPLKLAYALTIHKSQGLT-------LSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRLEEESRLDYLAE 707          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A7D9LKR7_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LKR7_PARCT)

HSP 1 Score: 305 bits (781), Expect = 9.790e-93
Identity = 192/473 (40.59%), Postives = 273/473 (57.72%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQD----RDGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIIL---DKVQRQTATKA-FLNLLPRARNGLLTEDDWRLLATPVPHTRQR---FNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQG--SREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
             +E Q++ Y+IV +H D     + E LC  + G AGTGKS+L+NA+ ++L S+   AA TG AA+ + G T++SLLKLP+  R  + L G+SL +LQ S   + Y+IIDE S + QV F W+D+   Q TG  ++  GG S+I TGDPG LPP   + L+ A+P + + ++G+ AY  F KV+ L    +VQ  T+ +  F +LL R   G  T DDW+LL T  P        F D TRLFYS  +V  YN  +L  +   +  + A HSSA A+  +SD   GL+  +FLA+ ARVMLT NLWS +GL NG  G VVD+++    + P LP  V+V F    GP ++       C+PI  +     +    T  G   R++LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K L   +I+PM + RL+ L     L+ +L E+ RL  L +
Sbjct:  260 FSEMQKLAYDIVKSHFDDTRLSNKEPLCFIINGVAGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGSRGKKDLTGQSLCRLQESVNNIGYIIIDEYSMLDQVTFGWIDKRCKQATGYNDKVFGGKSLILTGDPGQLPPVADKPLYHAKPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQIQFRDLLLRLHKGDSTVDDWKLLLTRQPSNVTNLCDFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNE--NQPLCIPICPI-----TVASQTEIGFHERQQLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSLKSSANLQYKLEEENRLDQLAQ 718          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A6S7GZ07_PARCT (ATP-dependent DNA helicase n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7GZ07_PARCT)

HSP 1 Score: 314 bits (804), Expect = 1.050e-92
Identity = 197/471 (41.83%), Postives = 277/471 (58.81%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQD---RDGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIIL---DKVQRQTATKA-FLNLLPRARNGLLTEDDWRLLATPVPHTRQR---FNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLE-TSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
             +E Q++ YNIV +H D    + E LC+ + G AGTGKS+L+NA+ ++L S+   AA TG AAF + G T++SLLKLP+  R N+ L G+SL +LQ S   + Y+IIDE S + QV F W+D+   Q TG  ++  GG S+I TGDPG LPP   + L+ A+P + + ++G+ AY  F KV+ L    +VQ  T+ +  F +LL R R G  T DDW+LL T  P        F D TRLFYS  +V  YN  +L  +   +  + A HSSA A+  +SD   GL+  +FLA+ ARVMLT NLWS +GL NG  G VVD+++    + P LP  ++V F    GP ++ +     C+PI  +  TS +  G   RQ    +LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K     +I+PM + RL+ L     L+ RL E+ RL  L +
Sbjct:  732 FSEMQKLAYNIVKSHFDDTSSEKEPLCLIINGVAGTGKSYLINAIRNILQSKCAVAATTGKAAFNIRGVTVHSLLKLPVGSRGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGCNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLCDFEDSTRLFYSNEQVSNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAIIVEFENYRGPVFNESRPL--CIPIYPITVTSQTEIGFHERQ----QLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKSFASCVIEPMTYERLTSLKSSANLQYRLEEENRLDQLAQ 1189          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A7D9ISC4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ISC4_PARCT)

HSP 1 Score: 317 bits (812), Expect = 1.360e-92
Identity = 201/470 (42.77%), Postives = 271/470 (57.66%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQDR---DGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPM--RANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATKA----FLNLLPRARNGLLTEDDWRLLATPVPHT---RQRFNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
             +E Q + YNIV+ H      D E LC+ V+G AGTGKS+L+NAL ++L ++    A TG AAF V G T++SLLKLP+  R  + L G++L +LQ S  GVEY+IIDE S + QV F WVD+   Q TG  ++ LGG S I  GDPG LPP   + L+ A+P + + ++GY +Y  F KVI L   QR     +    F +LL R R G  T DDW+LL T  P        F D TRLFYS  +V  YN ++L  +   V  + A HSSA A+   S+   GL+  LFLA+ ARVMLT NLWS +GL NG  G +VD ++    + P LP  V+V+F    GP+         CVPI  +  S+ S   +     R++LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K L   +I+PM + RL+ L     L+ RL E+ RL  L +
Sbjct: 1327 FSEMQGLAYNIVNTHLSNTSCDKEPLCLIVIGVAGTGKSYLINALRNLLQNKCAVTATTGKAAFNVQGITIHSLLKLPVGSRGKKDLTGQTLCRLQESSNGVEYIIIDEYSMLGQVTFGWVDKRCKQATGCNDKVLGGKSFILFGDPGQLPPVADKPLYHAKPSNAVGEQGYQSYSMFDKVIKLTVNQRVQGMSSEQVTFRDLLLRLRKGESTVDDWKLLLTRQPSAISNLSEFEDATRLFYSNEQVANYNHDQLSKLEHPVAHINACHSSAIAKKIPSEDMSGLEPVLFLAKGARVMLTMNLWSSVGLCNGATGTIVDFIFESNHRPPDLPVAVIVQFENYRGPSLDHTR--LSCVPICPITVSFQS---ENGFHERQQLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPMTYERLTSLKSSANLQFRLEEENRLDRLAQ 1784          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: UPI00106C135D (ATP-dependent DNA helicase PIF1-like isoform X5 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C135D)

HSP 1 Score: 304 bits (779), Expect = 3.730e-92
Identity = 194/468 (41.45%), Postives = 272/468 (58.12%), Query Frame = 1
Query:    1 LNEHQRVTYNIVHAHQDRDG-EHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPMRANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATK----AFLNLLPRARNGLLTEDDWRLLATPVPHTR-----QRFNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
            LN+ QR+ ++I+ A    D  E L M V G AGTGK++L++AL  +L  +    A TG+AAF +GG TLYS  +LP+R  R LQG+SL++LQ+   G  +LIIDE+S +     +W+D  L   TGK +   GG+S+I  GD G LPP G + ++ A     +S  G++ Y +F  V+IL++V RQ        AF  LL R R+G +TE DWRLL   + H+R      RF+D  RL++ K  V  YN  KL  +G  ++K++A HS   A  ATSD A GL+  LFL+  A VMLTCNLW+E+GL NG  G V    +A     P LP  V+V F   +GP + +    ++C+P+      W + G   +  SR++LPL L +A+T+HKSQ QT       L  AV+DLGK E  AG TFV  SR + + D++ +PM F RL  + +   LK R   + RLR L E
Sbjct:  299 LNDKQRLAFDIITASMANDECEPLHMIVSGTAGTGKTYLISALKQVLQHQCIVTATTGIAAFSIGGQTLYSAAQLPIREYRELQGDSLQRLQLRLEGKRFLIIDEMSMIGHQMLSWLDNRLRAGTGKEDIPFGGMSIILMGDFGQLPPVGDKPMYIAGNGSVISDHGHSMYLTFDYVVILEQVMRQIGEDPEVVAFRALLMRMRDGQVTEMDWRLL---IQHSRPNVSMDRFSDAIRLYFDKKSVAEYNYEKLLEIGQPLVKIQARHSGRGASAATSDEAGGLEAVLFLSTKAEVMLTCNLWAEVGLCNGSFGTVEQFWFAENMGPPNLPIAVLVHFPAYSGPAFLQ--ECSKCIPVPPRLFEWMADG---KYLSRQQLPLRLRYAMTIHKSQGQT-------LTKAVVDLGKGERVAGCTFVAASRVRSINDIVFEPMTFDRLKVIGRNKNLKKRQEAERRLRVLAE 751          
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Match: A0A6S7K654_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K654_PARCT)

HSP 1 Score: 306 bits (783), Expect = 1.470e-91
Identity = 194/466 (41.63%), Postives = 267/466 (57.30%), Query Frame = 1
Query:   13 QRVTYNIVHAHQDR---DGEHLCMRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKLPMRAN--RPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTTGKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFRKVIILDKVQRQTATKA----FLNLLPRARNGLLTEDDWRLLAT---PVPHTRQRFNDDTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQRELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVVVRFHE*TGPTWSRAPRYARCVPIARLETSWSSTGDDTRQGSREKLPLSLCWAITMHKSQRQTVEMAVIDLGMAVIDLGKFETTAGLTFVCLSRAKRLVDLLIDPMLFSRLSKLAQKPTLKLRLLEKVRLRGLGE 1374
            Q + YNIV+ H      D E LC+ V+G AGTGKS+L+NAL ++L ++    A TG AAF V G T++SLLKLP+R+   + L G++L +LQ S  GVEY++IDE S + QV F WVD+   Q  G  ++ LGG S I  GDPG LPP   + L+ A+P + + ++GY +Y  F KVI L   QR     +    F +LL R R G  T DDW+LL T           F D TRLFYS  +V  YN ++L  +   V  + A HSSA A+   S+   GL+  LFLA+ ARVMLT NLWS +GL N   G +VD ++    + P  P  V+V+F    GP++        CVPI  +  S+ S   +     R++LPL L WA+T+HKSQ  T       L  A ID+GK E TAG+++V +SR K L   +I+P+ + RL+ L     L+ RL E+ RL  L +
Sbjct:  431 QGLAYNIVNTHLSNTSCDKEPLCLIVIGVAGTGKSYLINALRNLLQNKCAVTATTGKAAFNVQGITIHSLLKLPVRSRGKKDLTGQTLCRLQESSNGVEYIVIDEYSMLGQVTFGWVDKRCKQAMGCNDKVLGGKSFILFGDPGQLPPVADKPLYHAKPSNAVGEQGYQSYSMFDKVIKLTVNQRVQGMSSEQVTFRDLLLRLRKGESTVDDWKLLLTRQHSAISNLSEFEDATRLFYSNEQVANYNHDQLSKLEHPVAHINACHSSAIAKKIPSEDMSGLEPVLFLAKGARVMLTMNLWSSVGLCNRATGTIVDFIFESNHQPPDFPVAVIVQFENYRGPSFDHTR--LSCVPICPITVSFQS---ENGFHERQQLPLRLAWALTIHKSQGLT-------LPKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPVTYERLTSLKSSANLQFRLEEENRLDRLAQ 884          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig670.14303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L976_9PHAE1.100e-13153.68ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6S7G8V4_PARCT6.310e-9642.25ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A7D9JFR3_PARCT7.690e-9641.83ATP-dependent DNA helicase n=2 Tax=Paramuricea cla... [more]
UPI0010699F957.150e-9441.45ATP-dependent DNA helicase PIF1-like isoform X6 n=... [more]
UPI000A2A6B3A1.310e-9340.99uncharacterized protein LOC110247455 n=1 Tax=Exaip... [more]
A0A7D9LKR7_PARCT9.790e-9340.59ATP-dependent DNA helicase n=2 Tax=Paramuricea cla... [more]
A0A6S7GZ07_PARCT1.050e-9241.83ATP-dependent DNA helicase n=3 Tax=Alcyonacea TaxI... [more]
A0A7D9ISC4_PARCT1.360e-9242.77ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
UPI00106C135D3.730e-9241.45ATP-dependent DNA helicase PIF1-like isoform X5 n=... [more]
A0A6S7K654_PARCT1.470e-9141.63ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig670contigH-elongata_contig670:12413..13822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score166.8
Seed ortholog evalue1.6e-38
Seed eggNOG ortholog28564.XP_002484617.1
EggNOG free text desc.Helitron helicase-like domain at N-terminus
EggNOG OGs39JTG@33154,3Q45F@4751,3RMAN@4890,COG0507@1,KOG0987@2759
COG Functional cat.L
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons3
Model size1374
Cds size918
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig670.14303.1prot_H-elongata_contig670.14303.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig670 12797..13750 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.9559565-UTR-H-elongata_contig670:12412..127961622931059.9559565-UTR-H-elongata_contig670:12412..12796Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig670 12413..12796 -
1691679681.3224254-UTR-H-elongata_contig670:12412..127961691679681.3224254-UTR-H-elongata_contig670:12412..12796Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig670 12413..12796 -
1622931060.013393-UTR-H-elongata_contig670:13750..138221622931060.013393-UTR-H-elongata_contig670:13750..13822Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig670 13751..13822 -
1691679681.3726203-UTR-H-elongata_contig670:13750..138221691679681.3726203-UTR-H-elongata_contig670:13750..13822Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig670 13751..13822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.9741838-CDS-H-elongata_contig670:12796..131351622931059.9741838-CDS-H-elongata_contig670:12796..13135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 12797..13135 -
1691679681.3321538-CDS-H-elongata_contig670:12796..131351691679681.3321538-CDS-H-elongata_contig670:12796..13135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 12797..13135 -
1622931059.987962-CDS-H-elongata_contig670:13150..132371622931059.987962-CDS-H-elongata_contig670:13150..13237Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 13151..13237 -
1691679681.3466551-CDS-H-elongata_contig670:13150..132371691679681.3466551-CDS-H-elongata_contig670:13150..13237Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 13151..13237 -
1622931060.0018992-CDS-H-elongata_contig670:13258..137501622931060.0018992-CDS-H-elongata_contig670:13258..13750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 13259..13750 -
1691679681.3605146-CDS-H-elongata_contig670:13258..137501691679681.3605146-CDS-H-elongata_contig670:13258..13750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig670 13259..13750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig670.14303.1

>prot_H-elongata_contig670.14303.1 ID=prot_H-elongata_contig670.14303.1|Name=mRNA_H-elongata_contig670.14303.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
MRVLGKAGTGKSWLVNALPHMLGSRIRRAAPTGMAAFLVGGSTLYSLLKL
PMRANRPLQGESLKKLQVSPGGVEYLIIDELSKVSQVQFAWVDRILCQTT
GKTEEALGGISVITTGDPGPLPPFGGRALHTAQPKDQLSQEGYNAYRSFR
KVIILDKVQRQTATKAFLNLLPRARNGLLTEDDWRLLATPVPHTRQRFND
DTRLFYSKAEVKVYNGNKLRAVGIAVLKVEANHSSAAAQNATSDAAQGLQ
RELFLAQDARVMLTCNLWSEMGLINGIQGKVVDLVWAPGGKTPALPEFVV
VRFHE*
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mRNA from alignment at H-elongata_contig670:12413..13822-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig670.14303.1 ID=mRNA_H-elongata_contig670.14303.1|Name=mRNA_H-elongata_contig670.14303.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1410bp|location=Sequence derived from alignment at H-elongata_contig670:12413..13822- (Himanthalia elongata Himel1 dioecious)
TTGAATGAGCACCAGCGTGTCACGTACAACATTGTGCACGCCCACCAAGA TCGCGACGGCGAGCATCTGTGCATGCGGGTGCTAGGGAAAGCAGGAACGG GTAAGTCTTGGCTGGTGAACGCTCTGCCGCACATGCTTGGAAGCAGGATC AGGCGTGCGGCGCCGACTGGCATGGCCGCATTCCTCGTCGGTGGCAGCAC ATTGTACAGTCTGCTCAAACTACCTATGAGAGCGAACCGACCGTTACAGG GTGAGTCGCTCAAGAAGCTACAGGTGTCTCCAGGCGGCGTCGAGTACCTT ATCATCGATGAGCTCAGCAAGGTCAGCCAGGTGCAGTTTGCATGGGTGGA CCGCATATTGTGCCAAACAACCGGCAAGACGGAGGAGGCCTTAGGCGGGA TTTCTGTCATCACGACGGGAGACCCGGGTCCACTGCCGCCCTTTGGTGGA AGGGCTCTTCACACAGCGCAGCCCAAGGATCAGCTCAGCCAAGAAGGGTA CAACGCGTATAGGTCATTCCGCAAAGTCATCATTCTTGACAAGGTGCAGC GCCAAACAGCAACCGTGGATGGAGGCGACGATTAGAAGGCTTTCCTCAAC CTTCTCCCCCGGGCGCGCAACGGCCTTCTCACGGAGGACGATTGGCGCCT ACTCGCCACGCCCGTACCTCATGTCTAGATGAAAGAGACCAGGCAACGCT TTAATGATGACACACGCCTTTTCTACTCGAAGGCCGAAGTGAAAGTCTAC AACGGGAACAAGCTTCGAGCGGTCGGAATAGCTGTGCTCAAGGTTGAGGC GAATCATTCGTCCGCGGCCGCTCAAAACGCAACTTCGGACGCCGCCCAGG GGCTCCAACGTGAGCTATTTCTCGCGCAGGATGCCAGAGTCATGCTGACA TGTAACCTATGGTCGGAGATGGGGCTCATCAACGGCATTCAAGGAAAGGT AGTTGACCTCGTGTGGGCACCAGGAGGGAAGACCCCCGCCCTGCCGGAAT TCGTTGTCGTGCGGTTTCACGAGTAGACCGGCCCGACGTGGTCCCGTGCC CCACGGTACGCAAGGTGCGTGCCCATCGCCCGGCTAGAGACGTCCTGGAG CTCCACGGGAGACGACACTAGGCAGGGTTCGAGAGAGAAACTACCCCTAT CCCTGTGCTGGGCAATTACCATGCACAAGAGCCAGCGACAGACGGTGGAG ATGGCCGTAATCGACCTGGGGATGGCCGTAATCGACCTGGGGAAGTTCGA GACCACCGCGGGATTGACCTTCGTGTGCCTCAGCCGGGCTAAACGCTTAG TGGACTTGTTGATAGACCCCATGCTTTTCAGTAGGCTTTCGAAACTCGCC CAAAAGCCTACTTTAAAGCTTAGGCTACTTGAGAAAGTGCGCCTTAGAGG GCTTGGAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig670:12413..13822-

>mRNA_H-elongata_contig670.14303.1 ID=mRNA_H-elongata_contig670.14303.1|Name=mRNA_H-elongata_contig670.14303.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1836bp|location=Sequence derived from alignment at H-elongata_contig670:12413..13822- (Himanthalia elongata Himel1 dioecious)
ATGCGGGTGCTAGGGAAAGCAGGAACGGGTAAGTCTTGGCTGGTGAACGC
TCTGCCGCACATGCTTGGAAGCAGGATCAGGCGTGCGGCGCCGACTGGCA
TGGCCGCATTCCTCGTCGGTGGCAGCACATTGTACAGTCTGCTCAAACTA
CCTATGAGAGCGAACCGACCGTTACAGGGTGAGTCGCTCAAGAAGCTACA
GGTGTCTCCAGGCGGCGTCGAGTACCTTATCATCGATGAGCTCAGCAAGG
TCAGCCAGGTGCAGTTTGCATGGGTGGACCGCATATTGTGCCAAACAACC
GGCAAGACGGAGGAGGCCTTAGGCGGGATTTCTGTCATCACGACGGGAGA
CCCGGGTCCACTGCCGCCCTTTGGTGGAAGGGCTCTTCACACAGCGCAGC
CCAAGGATCAGCTCAGCCAAGAAGGGTACAACGCGTATAGGTCATTCCGC
AAAGTCATCATTCTTGACAAGGTGCAGCGCCAAACAGCAACCATGCGGGT
GCTAGGGAAAGCAGGAACGGGTAAGTCTTGGCTGGTGAACGCTCTGCCGC
ACATGCTTGGAAGCAGGATCAGGCGTGCGGCGCCGACTGGCATGGCCGCA
TTCCTCGTCGGTGGCAGCACATTGTACAGTCTGCTCAAACTACCTATGAG
AGCGAACCGACCGTTACAGGGTGAGTCGCTCAAGAAGCTACAGGTGTCTC
CAGGCGGCGTCGAGTACCTTATCATCGATGAGCTCAGCAAGGTCAGCCAG
GTGCAGTTTGCATGGGTGGACCGCATATTGTGCCAAACAACCGGCAAGAC
GGAGGAGGCCTTAGGCGGGATTTCTGTCATCACGACGGGAGACCCGGGTC
CACTGCCGCCCTTTGGTGGAAGGGCTCTTCACACAGCGCAGCCCAAGGAT
CAGCTCAGCCAAGAAGGGTACAACGCGTATAGGTCATTCCGCAAAGTCAT
CATTCTTGACAAGGTGCAGCGCCAAACAGCAACCAAGGCTTTCCTCAACC
TTCTCCCCCGGGCGCGCAACGGCCTTCTCACGGAGGACGATTGGCGCCTA
CTCGCCACGCCCGTACCTCATAAGGCTTTCCTCAACCTTCTCCCCCGGGC
GCGCAACGGCCTTCTCACGGAGGACGATTGGCGCCTACTCGCCACGCCCG
TACCTCATACCAGGCAACGCTTTAATGATGACACACGCCTTTTCTACTCG
AAGGCCGAAGTGAAAGTCTACAACGGGAACAAGCTTCGAGCGGTCGGAAT
AGCTGTGCTCAAGGTTGAGGCGAATCATTCGTCCGCGGCCGCTCAAAACG
CAACTTCGGACGCCGCCCAGGGGCTCCAACGTGAGCTATTTCTCGCGCAG
GATGCCAGAGTCATGCTGACATGTAACCTATGGTCGGAGATGGGGCTCAT
CAACGGCATTCAAGGAAAGGTAGTTGACCTCGTGTGGGCACCAGGAGGGA
AGACCCCCGCCCTGCCGGAATTCGTTGTCGTGCGGTTTCACGAGTAGACC
AGGCAACGCTTTAATGATGACACACGCCTTTTCTACTCGAAGGCCGAAGT
GAAAGTCTACAACGGGAACAAGCTTCGAGCGGTCGGAATAGCTGTGCTCA
AGGTTGAGGCGAATCATTCGTCCGCGGCCGCTCAAAACGCAACTTCGGAC
GCCGCCCAGGGGCTCCAACGTGAGCTATTTCTCGCGCAGGATGCCAGAGT
CATGCTGACATGTAACCTATGGTCGGAGATGGGGCTCATCAACGGCATTC
AAGGAAAGGTAGTTGACCTCGTGTGGGCACCAGGAGGGAAGACCCCCGCC
CTGCCGGAATTCGTTGTCGTGCGGTTTCACGAGTAG
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