mRNA_H-elongata_contig6680.14282.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6680.14282.1
Unique NamemRNA_H-elongata_contig6680.14282.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 862 bits (2227), Expect = 3.400e-285
Identity = 504/955 (52.77%), Postives = 607/955 (63.56%), Query Frame = 1 
Query:    1 YIEDLAEVAHEKERERAAGRETIKSSGFVSDEQRHVLRRHCS--------LRAARLRFELKTSAVIMRDLAVYMGPHGLGLKLRVHCGGIAVSGHRMLPTGIQNSGQAAGVQIGDLVVSIDNIVVDTPRALAQRLKNDNLAQSGKFAIMKVLTRVPLIDGLGEPLTSAMNYSGIDVVKGALLEGEIMLHHNFVIGADWKGQTCREWRQGVSFAGQGVGQGWGHGALSVVE-----ATPGQTDKEE-------------AVPLPPGHSPPLHREGALELGPSTKEAVRDAVKDLGRRMLQLEALVFKQDIVVDARWVEKDRRRKWRTSVHNAQTAVQLLAAWGTFWEMIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKARHRAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEPESFPELGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMATLDEPILAAALEKTTEDGNRLESVWNKQMLAAINATPQLATMPGMRNIASRQFGISTGEGDHEVGGGDASGTESDDDSGQPGAARIARQVFYDKLVGIKYGTSKERKPSRMGPRNHKEQTHSKPRAQPRQGSTAGTSEQATDPAASCVSSSSAAVLVEHQSLGVAAKDNALTSGT--------------------GEATSMDVELAVAPSEESMLKTSSDRAGAIPVFTATVKSKDSNRWAAAEAGDGAGLSRARMARGGGILASAGAKVEPGSGARAEARACGTLRVSMCLSNEIPEFVVMTSKYEDAIRYQWRSEMRIQMASTEDPGESLRVNKGILVGVKSRDESTEMMPWESLEVEWDDEEDITMVNPWEVEAVSDATEAARHRA 2727
            Y+ + AEVA EKERER+AG   + S GF ++EQR  L+R CS        LRAA L FELKTS  +MRDLAV+MGP+GLGL+L V  GG+ V G   +P G+ N GQAAGV++GDL+VS+D IV +TPR LAQ LK+  L+QSGK  ++KVL+ V L DG GEPL  A++Y+ ID+VKGALLE E  LHH+FV+G  W+GQ C EWR GVSFAGQG  Q  G G     +     ATP  T+ ++                   G  P L  +G L LGP +  A R AV++L RRML +EALVFKQD VVDARW E  RRRKWRT V+NAQTA QLLAAWG F ++IDW+AA GCYSELDRRKF+SLLP++ RN++PDKGD V+Y+GDGH+LS+EAE KA +R   GSD PRPG ++Q TVKSISYH GGS RRAKGAQPFAT++LEP P P SF ELGLL  +EPFG LNRLLK+++KAMRE  DV +FL P SRTIYPDYYD+ISEPMDL+KLWKRCSACRY++V++FK +L LVASNCRLYCQDKF  LPPAADAAV VGM TLDEP LAA L KT EDG RLE++WNK M AAI+A+P+LATMPGM+ +A RQ G  TG  + +  G     ++ DDD GQP  A IARQVFYDKLVGIKYGT  E +  +    +  +     P+           + +A  P A+ VS +  +               A  S                      GEA S       AP       T                                       A      A     V PG          G LRVSM LSNE+PEFVV+TSKY++A+ + WRSEM IQMA  E+PGE  R+ +G LVGVK +D  T+MMPWE L VEWDDE  +  VNPWEVEAVS AT AAR RA
Sbjct: 1234 YLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLA-RQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEEEKHQTDGSDSGDAKKKPPKLDE--------TPEARSPTANGVSPTPPSPGXXXXXXXXXXXPQASPSXXXXXXXXXXXXXXXXXXXXXXGEA-SPSSAATCAPGAXXXXXTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA------APVAPAVVPG----------GVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRA 2162
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 601 bits (1549), Expect = 1.390e-200
Identity = 363/738 (49.19%), Postives = 430/738 (58.27%), Query Frame = 1 
Query:  715 GHSPPLHREGALELGPSTKEAVRDAVKDLGRRMLQLEALVFKQDIVVDARWVEKDRRRKWRTSVHNAQTAVQLLAAWGTFWEMIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKARHRAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEPESFPELGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMATLDEPILAAALEKTTEDGNRLESVWNKQMLAAINATPQLATMPGMRNIASRQFGISTGEGDHEVGGGDASGTESDDDSGQPGAARIARQVFYDKLVGIKYGTSKERKPSRMGPRNHKEQTHSKPRAQPRQGSTAGTSEQATDPAASCVSSSSA-------------------------------------------------------------------AVLVEHQSLGVAAKDNALTSGTGEATSMDVELAVAPSEESMLKTSSDRAGAIPVFTATVKSKDSNRWAAAEAGDGAGLSRARMARGGGILASAGAKVEPGSGARAEARACGTLRVSMCLSNEIPEFVVMTSKYEDAIRYQWRSEMRIQMASTEDPGESLRVNKGILVGVKSRDESTEMMPWESLEVEWDDEEDITMVNPWEVEAVSDATEAARHRA 2727
            G  P L  +G L LGP +  A R AV++L RRML +EALVFKQD VVDARW E  RRRKWRT V+NAQTA QLLAAWG F ++IDW+AA GCYSELDRRKF+SLLP++ RN++PDKGD V+Y+GDGH+LS+EAE KA +R   GSD PRPG ++Q TVKSISYH GGS RRAKGAQPFAT++LEP P P SF ELGLL  +EPFG LNRLLK+++KAMRE  DV +FL P SRTIYPDYYD+ISEPMDL+KLWKRCSACRY++V++FK +L LVASNCRLYCQDKF  LPPAADAAV VGM TLDEP LAA L KT EDG RLE++WNK M AAI+A+P+LATMPGM+ +A RQ G  TG  + +  G     ++ DDD GQP  A IARQVFYDKLVGIKYGT  E +  +    N       KP       S    + +A  P A+ VS +                                                                                                       A S+     T++                                                A V P           G  RVSM LSNE+PEFVV+ SKY++A+ + WRSEM IQMA  E+PGE  R+ +G LVGVK +D  T+MMPWE L VEWDDE  +  VNPWEVEAVS AT AAR RA
Sbjct:   27 GSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLHIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLA-RQLGFDTGAAEEDDVGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEGEKQKTDG-NDSSDVKKKP-------SILDETPEARSPTANGVSPTPLWPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASQPRSPSTAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPAIAPG------GVFRVSMRLSNEMPEFVVVASKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLIVEWDDEAGMNTVNPWEVEAVSAATAAARRRA 749
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.480e-42
Identity = 111/303 (36.63%), Postives = 152/303 (50.17%), Query Frame = 1 
Query:  790 VKDLGRRMLQLE-ALVFKQDIV-VDARWVEKDRRRKWRTSVHNAQTAVQLLAAWGTFWEMIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKARHRAACGSDAPRPGAIKQCTVKSISYHGGGSQ-RRAKGAQPFATMDL--------EPLPEPESFPE--------LGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMATLDEPIL 1641
            V DL   +L LE AL  KQ ++ VD RW +  RRRKWR  V  A+T+ QL+ AW      +DW  A   ++ L RR F+  +PS  RN +PD GD V+YFGDGH  ++  +      A  G   P  GA+  C V+ I+Y  G  Q       QPFAT  L        + +P     PE        LGL    +  G LNRLL+RS+     TP    F++P   +  PDY ++++ PMDL  +W++     Y T++QF+ DL LV  NC  YC  ++  L    +  VK    TL  P L
Sbjct: 1685 VSDLVPALLDLESALAHKQTVLGVDGRW-QGARRRKWRAFVARARTSAQLVIAWSALEACLDWATAAAVWAALSRRAFLQNIPSQGRNTMPDIGDVVVYFGDGHTAALTFDKALGLSAMWGGQPPVEGAVLLCRVQEIAYCTGVPQGSELSPMQPFATFKLXXXXXXXXQVIPSDHQEPEVPTLPKEPLGLKPPGDSRGMLNRLLRRSLAVASRTPGSQPFMQPVDYSTNPDYREVVARPMDLGTIWRQTVEGHYATLEQFEQDLALVLDNCHAYCDSRYPWLSKDCERVVKAARDTLAHPEL 1986
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 7.330e-35
Identity = 84/154 (54.55%), Postives = 107/154 (69.48%), Query Frame = 1 
Query:    1 YIEDLAEVAHEKERERAAGRETIKSSGFVSDEQRHVLRRHCS--------LRAARLRFELKTSAVIMRDLAVYMGPHGLGLKLRVHCGGIAVSGHRMLPTGIQNSGQAAGVQIGDLVVSIDNIVVDTPRALAQRLKNDNLAQSGKFAIMKVLTR 438
            Y+ + AEVA EKERER+AG   + S GF ++EQR  L+R CS        LRAA L FELKT   +MRDLAV+MGP+GLGL+L V  GG+ V G   +P G+ N GQAAGV++GDL+VS+D IV +TPR LAQ LK+  L+QSGK  ++K   R
Sbjct: 1694 YLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKACDR 1847
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.300e-31
Identity = 99/293 (33.79%), Postives = 146/293 (49.83%), Query Frame = 1 
Query:  775 AVRDAVKDLGRRMLQLEALVFKQ----DIVVDARWVEKDRRRKWRTSVHNAQTAVQLLAAWGTFW-EMIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKARH-RAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEPESF-----PELGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMA 1620
            A  DA +DL    LQLE  V       +  V   W  K  RR+WR ++  A T  QL         E ++ +A    Y+ LDR+ +  L    +RN IP+ G  V+YFGDGH  +++ + KA+  R A  S+ PR  A   C V+S+SYH GG         P+A + L P P+   +     P   L  +  P   L+R+L R +  ++   D   FLEP S   +P+Y +I+ +PMDLS + ++  A  Y+   Q   D+ L+ SNC L+C  +F  LPP A   V++  A
Sbjct: 1518 ATFDAARDL---FLQLEDAVVAAAAAGNEAVRPSWQRK--RREWRLALEGACTYAQLAFLLHLLLDECVNVDAFMDQYARLDRKDWFKLRAKESRNFIPEVGKDVVYFGDGHAQALKEDAKAKKKRLAKKSEPPRSRATLVCAVESVSYHHGGGD-------PYALVVLAPRPDVSGYSFVRAPGSVLCPQPSPAQRLSRILMRVVSKLKLQTDAGPFLEPVSDREFPEYKEIVLQPMDLSAVTRKVRALEYRDAGQLLADMRLICSNCELFCDGRFPALPPLARNLVELADA 1798
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A0P1AKP8_PLAHL (CREB binding protein/P300 and related TAZ Zn-finger proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP8_PLAHL)

HSP 1 Score: 137 bits (345), Expect = 4.150e-29
Identity = 88/251 (35.06%), Postives = 124/251 (49.40%), Query Frame = 1 
Query:  880 RRRKWRTSVHNAQTAVQLLAAWGTFWE-MIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKA-RHRAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEPESF-----PELGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKV 1611
            +R +WR ++    T  QL+       E  I  EA    +  LDRR+++ L P    N IP+ G +VIYFGDGH L+++ + K+ R R    SD P   A   C+VKS+SYH GG         P+A   LEP+ +P        P             L R+  R +  ++   D   FLEP S   +P Y +II  PMDL  +  + S   YK   +F  DL+L+  NC+L+C+D+F  LPP A   V V
Sbjct: 1515 KRHEWRLALEGVCTYAQLVFLLHLLLEEFISVEAFMDLHIRLDRREWLKLRPKETHNFIPEVGQTVIYFGDGHALALKEDDKSKRKRFTQKSDKPVRNATVICSVKSVSYHHGGGD-------PYALAVLEPISDPAQHGCVREPGTYFCPLPSREHRLARVFLRILAKLKGLADADPFLEPVSDWEFPQYKEIILHPMDLKTITMKASNLEYKNAAEFMSDLKLMRDNCQLFCEDRFPTLPPLAHNLVYV 1758
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: W2Q4M5_PHYPN (Uncharacterized protein n=46 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q4M5_PHYPN)

HSP 1 Score: 136 bits (342), Expect = 9.430e-29
Identity = 88/251 (35.06%), Postives = 129/251 (51.39%), Query Frame = 1 
Query:  880 RRRKWRTSVHNAQTAVQLLAAWGTFWE-MIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKA-RHRAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEP---ESFPELGLLARSEPFGT--LNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKV 1611
            +R +WR ++  + T  QL+       E  ++ EA    +  LDRR+++ L P   RN IP+ G +V+YFGDGH L+++ + K+ R R    SD P   A   CTV+ +SYH GG         P+A   L+P+ +    E   E G L    P     L R+  R +  ++   D   FLEP S   +P Y +II +PMDL K+  + S   YK   +F  DL L+  NC+L+C+ +F  LPP A   V V
Sbjct: 1504 KRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD-------PYALAVLKPISDMANHECIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASTLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLVYV 1747
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A0W8AY53_PHYNI (SWR1 complex bromodomain subunit bdf1 n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8AY53_PHYNI)

HSP 1 Score: 135 bits (341), Expect = 1.100e-28
Identity = 88/251 (35.06%), Postives = 129/251 (51.39%), Query Frame = 1 
Query:  880 RRRKWRTSVHNAQTAVQLLAAWGTFWE-MIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKA-RHRAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEP---ESFPELGLLARSEPFGT--LNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKV 1611
            +R +WR ++  + T  QL+       E  ++ EA    +  LDRR+++ L P   RN IP+ G +V+YFGDGH L+++ + K+ R R    SD P   A   CTV+ +SYH GG         P+A   L+P+ +    E   E G L    P     L R+  R +  ++   D   FLEP S   +P Y +II +PMDL K+  + S   YK   +F  DL L+  NC+L+C+ +F  LPP A   V V
Sbjct: 1114 KRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD-------PYALAVLKPISDMANHECIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASMLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLVYV 1357
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BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: A0A6G0RU20_9STRA (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RU20_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.640e-28
Identity = 89/256 (34.77%), Postives = 130/256 (50.78%), Query Frame = 1 
Query:  865 WVEKDRRRKWRTSVHNAQTAVQLLAAWGTFWE-MIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGHMLSVEAEVKARH-RAACGSDAPRPGAIKQCTVKSISYHGGGSQRRAKGAQPFATMDLEPLPEP---ESFPELGLLARSEPFGT--LNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKV 1611
            W+ K  R +WR ++  + T  QL+       E  I+ EA    +  LDRR+++ L P   RN IP+ G  V+YFGDGH L+++ + K++  R    S  P   A   CTV+++SYH GG         P+A   L+P+PE    E   + G L  S P     L R+  R +  ++   D   FLEP S   +P Y +II  PM L K+ ++ S   Y    +F  DL L+  NC+L+C+ +F  LPP A   V V
Sbjct: 1522 WLRK--RHEWRLALEGSCTYAQLVFLLHLLLEEFINVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGQVVVYFGDGHALALKEDEKSKKKRFTQKSGTPVRNATVVCTVENVSYHHGGGD-------PYALAVLKPIPEMAHHECIRDPGTLLCSLPSREQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILHPMHLGKMTEKASNLEYNNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLVHV 1768
[Close]
BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Match: I2CQX7_NANGC (Transcription initiation factor TFIID subunit 1 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX7_NANGC)

HSP 1 Score: 128 bits (321), Expect = 2.660e-26
Identity = 124/468 (26.50%), Postives = 194/468 (41.45%), Query Frame = 1 
Query:  304 GVQIGDLVVSIDNIVVDTPRALAQRLKNDNL------AQSGKFAIMKVLTRVPLIDGLG-EPLTSAMNYSGIDVVKGALLEGEIMLHHNFVIGADWKGQTCR-EWRQGVSFAGQGVGQGWGHGALSVVEATPGQTDKEEAVPLPPGHSPPLHREGALELGPSTKEAVRDAVKDLGRRMLQLEALVFKQDIVVDARWVEKDRRRKWRTSVHNAQTAVQLLAAWGTFWEMIDWEAACGCYSELDRRKFMSLLPSNARNAIPDKGDSVIYFGDGH-------------MLSVEAEVKARHRAACGSDAPRPGAIKQCTVKSISYHG-GGSQRRAKGAQPFATMDLEPLPEPES---FPE--LGLLARSEPFGTLNRLLKRSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYKTVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMATL 1626
            G+ + D +V ++  ++D P+  +  +++D+        ++ +F +M +         +  + L   +  S  + V+G LL  E  + H   IG DW+G   +  WRQ                   V+ A  G+  K E++           R+ ALEL                 R+     ++ K+D    A    K    KWR  +  AQT  QLL        ++D          ++R  + +LLP      +PD G  VIY+  GH             M +VE   + ++ AA G+     GA++ C V  I YH    + +    +  +A + L  L EP     +PE  L L    EP  +L+RLL R + +  E  +   F EP  R  YPDYY++I  PMD + L  R     Y  +  F  DLEL++ NC  YC  +F  LP  AD  V V   T+
Sbjct:  323 GINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWRQ------------------MVMRALDGEKKKAESL-----------RKAALELE---------------GRLRACGTVLSKEDREGRA----KGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGHKAAMRHNARFQGPMWNVEGPHEEQNGAAAGA-----GAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETV 737
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6680.14282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R7_ECTSI3.400e-28552.77Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L3E5_9PHAE1.390e-20049.19Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZDW7_9STRA1.480e-4236.63Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5L351_9PHAE7.330e-3554.55DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
A0A5D6YQF5_9STRA1.300e-3133.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AKP8_PLAHL4.150e-2935.06CREB binding protein/P300 and related TAZ Zn-finge... [more]
W2Q4M5_PHYPN9.430e-2935.06Uncharacterized protein n=46 Tax=Phytophthora para... [more]
A0A0W8AY53_PHYNI1.100e-2835.06SWR1 complex bromodomain subunit bdf1 n=2 Tax=Phyt... [more]
A0A6G0RU20_9STRA1.640e-2834.77Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6680contigH-elongata_contig6680:979..7699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score871.3
Seed ortholog evalue4e-250
Seed eggNOG ortholog2880.D7G6R7
KEGG koko:K03125
KEGG Pathwayko03022,map03022
EggNOG free text desc.negative regulation of protein autoubiquitination
EggNOG OGsCOG5179@1,KOG0008@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons14
Model size2745
Cds size2745
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6680.14282.1prot_H-elongata_contig6680.14282.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6680 979..7699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931057.8093379-CDS-H-elongata_contig6680:978..11031622931057.8093379-CDS-H-elongata_contig6680:978..1103Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 979..1103 +
1691679680.5262728-CDS-H-elongata_contig6680:978..11031691679680.5262728-CDS-H-elongata_contig6680:978..1103Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 979..1103 +
1622931057.8272767-CDS-H-elongata_contig6680:1477..16491622931057.8272767-CDS-H-elongata_contig6680:1477..1649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 1478..1649 +
1691679680.5376608-CDS-H-elongata_contig6680:1477..16491691679680.5376608-CDS-H-elongata_contig6680:1477..1649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 1478..1649 +
1622931057.8447478-CDS-H-elongata_contig6680:1958..20871622931057.8447478-CDS-H-elongata_contig6680:1958..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 1959..2087 +
1691679680.547231-CDS-H-elongata_contig6680:1958..20871691679680.547231-CDS-H-elongata_contig6680:1958..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 1959..2087 +
1622931057.8656662-CDS-H-elongata_contig6680:2292..23761622931057.8656662-CDS-H-elongata_contig6680:2292..2376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 2293..2376 +
1691679680.556957-CDS-H-elongata_contig6680:2292..23761691679680.556957-CDS-H-elongata_contig6680:2292..2376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 2293..2376 +
1622931057.8777597-CDS-H-elongata_contig6680:2834..31721622931057.8777597-CDS-H-elongata_contig6680:2834..3172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 2835..3172 +
1691679680.5673368-CDS-H-elongata_contig6680:2834..31721691679680.5673368-CDS-H-elongata_contig6680:2834..3172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 2835..3172 +
1622931057.8922663-CDS-H-elongata_contig6680:3402..35111622931057.8922663-CDS-H-elongata_contig6680:3402..3511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 3403..3511 +
1691679680.5770173-CDS-H-elongata_contig6680:3402..35111691679680.5770173-CDS-H-elongata_contig6680:3402..3511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 3403..3511 +
1622931057.9051447-CDS-H-elongata_contig6680:3755..39161622931057.9051447-CDS-H-elongata_contig6680:3755..3916Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 3756..3916 +
1691679680.58705-CDS-H-elongata_contig6680:3755..39161691679680.58705-CDS-H-elongata_contig6680:3755..3916Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 3756..3916 +
1622931057.9325373-CDS-H-elongata_contig6680:4161..43091622931057.9325373-CDS-H-elongata_contig6680:4161..4309Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 4162..4309 +
1691679680.5972147-CDS-H-elongata_contig6680:4161..43091691679680.5972147-CDS-H-elongata_contig6680:4161..4309Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 4162..4309 +
1622931057.9484093-CDS-H-elongata_contig6680:4663..48231622931057.9484093-CDS-H-elongata_contig6680:4663..4823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 4664..4823 +
1691679680.6084921-CDS-H-elongata_contig6680:4663..48231691679680.6084921-CDS-H-elongata_contig6680:4663..4823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 4664..4823 +
1622931057.9682121-CDS-H-elongata_contig6680:5220..54021622931057.9682121-CDS-H-elongata_contig6680:5220..5402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 5221..5402 +
1691679680.616257-CDS-H-elongata_contig6680:5220..54021691679680.616257-CDS-H-elongata_contig6680:5220..5402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 5221..5402 +
1622931057.9984276-CDS-H-elongata_contig6680:5707..58681622931057.9984276-CDS-H-elongata_contig6680:5707..5868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 5708..5868 +
1691679680.6240087-CDS-H-elongata_contig6680:5707..58681691679680.6240087-CDS-H-elongata_contig6680:5707..5868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 5708..5868 +
1622931058.0143745-CDS-H-elongata_contig6680:6130..62481622931058.0143745-CDS-H-elongata_contig6680:6130..6248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 6131..6248 +
1691679680.631947-CDS-H-elongata_contig6680:6130..62481691679680.631947-CDS-H-elongata_contig6680:6130..6248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 6131..6248 +
1622931058.032908-CDS-H-elongata_contig6680:6522..71801622931058.032908-CDS-H-elongata_contig6680:6522..7180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 6523..7180 +
1691679680.641004-CDS-H-elongata_contig6680:6522..71801691679680.641004-CDS-H-elongata_contig6680:6522..7180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 6523..7180 +
1622931058.0512397-CDS-H-elongata_contig6680:7499..76991622931058.0512397-CDS-H-elongata_contig6680:7499..7699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 7500..7699 +
1691679680.6510725-CDS-H-elongata_contig6680:7499..76991691679680.6510725-CDS-H-elongata_contig6680:7499..7699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6680 7500..7699 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6680.14282.1

>prot_H-elongata_contig6680.14282.1 ID=prot_H-elongata_contig6680.14282.1|Name=mRNA_H-elongata_contig6680.14282.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=915bp
YIEDLAEVAHEKERERAAGRETIKSSGFVSDEQRHVLRRHCSLRAARLRF
ELKTSAVIMRDLAVYMGPHGLGLKLRVHCGGIAVSGHRMLPTGIQNSGQA
AGVQIGDLVVSIDNIVVDTPRALAQRLKNDNLAQSGKFAIMKVLTRVPLI
DGLGEPLTSAMNYSGIDVVKGALLEGEIMLHHNFVIGADWKGQTCREWRQ
GVSFAGQGVGQGWGHGALSVVEATPGQTDKEEAVPLPPGHSPPLHREGAL
ELGPSTKEAVRDAVKDLGRRMLQLEALVFKQDIVVDARWVEKDRRRKWRT
SVHNAQTAVQLLAAWGTFWEMIDWEAACGCYSELDRRKFMSLLPSNARNA
IPDKGDSVIYFGDGHMLSVEAEVKARHRAACGSDAPRPGAIKQCTVKSIS
YHGGGSQRRAKGAQPFATMDLEPLPEPESFPELGLLARSEPFGTLNRLLK
RSIKAMRETPDVVYFLEPFSRTIYPDYYDIISEPMDLSKLWKRCSACRYK
TVKQFKCDLELVASNCRLYCQDKFHDLPPAADAAVKVGMATLDEPILAAA
LEKTTEDGNRLESVWNKQMLAAINATPQLATMPGMRNIASRQFGISTGEG
DHEVGGGDASGTESDDDSGQPGAARIARQVFYDKLVGIKYGTSKERKPSR
MGPRNHKEQTHSKPRAQPRQGSTAGTSEQATDPAASCVSSSSAAVLVEHQ
SLGVAAKDNALTSGTGEATSMDVELAVAPSEESMLKTSSDRAGAIPVFTA
TVKSKDSNRWAAAEAGDGAGLSRARMARGGGILASAGAKVEPGSGARAEA
RACGTLRVSMCLSNEIPEFVVMTSKYEDAIRYQWRSEMRIQMASTEDPGE
SLRVNKGILVGVKSRDESTEMMPWESLEVEWDDEEDITMVNPWEVEAVSD
ATEAARHRATKGEL*
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mRNA from alignment at H-elongata_contig6680:979..7699+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6680.14282.1 ID=mRNA_H-elongata_contig6680.14282.1|Name=mRNA_H-elongata_contig6680.14282.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6721bp|location=Sequence derived from alignment at H-elongata_contig6680:979..7699+ (Himanthalia elongata Himel1 dioecious)
TACATCGAGGACTTGGCGGAGGTGGCCCACGAGAAGGAGCGAGAGCGAGC
GGCTGGAAGGGAGACCATCAAGTCTTCCGGTTTCGTCTCTGACGAGCAAA
GACACGTTCTTCGGCGGCATTGCAGGTGACGCGGTCGACACCTTCACCGC
ACGCGTGATAGCCAAATATTCGTGATGGCCTTCCCAGCGAAGCAGATCGC
GTACTGCGACGTTCAGGGGGAGGACGTTATTGAAGAGATATCTTGTAGCA
GGGTGCGCAGACGGAAGACCGTGGAAGCTATCGGCGTAGCCCGAGCGCAC
TTTGCATAGAAATGTAGAGTAAGTACTCTAAAAAGGCTCATCATGTCACG
GAGGTGAAGGGTATGGCACCTGATTGTGGCGATATCGGCCTTCAGTCCAA
TGAATTTTCGCCGTTGCCTTCCCGTGCACCGTCGTCCTGTGTGTGGCCGC
TACTCATTTCTTGGGTTGCAAACATCCCTTTGGTCGTGGATCTATATAGT
TTGCGCGCGGCTCGGCTGAGGTTCGAGCTTAAGACGTCCGCCGTGATCAT
GCGCGACCTCGCCGTGTACATGGGGCCCCACGGCCTGGGCCTAAAGCTAC
GTGTGCACTGCGGTGGCATTGCAGTGTCTGGGCACAGGATGCTCCCCACA
GGCATTCAAAACTCCGGACAGGTGGGAGAAAACCACGGAAACGGGATGTG
GCTTATTTGCGGTGCCGTGTTTACTTATCAGGCGTCTGCACCGCAAGTTG
CTCACTTAAGTTGACCGCCGCTTTTGCGGCCTTCTGCTATTGTAGCAGTA
CACGAACGCGTCTTCCCCTCCGTGCAACGATGTCGTTGGCGCAGTTGTAA
TATAATTTAGTTTATGTATTTACTGAAGTAATGTATTCAGAAGTGTAATT
CGGTTTCGTTCATGTGCAGTGGTAGTAACCCTTGATGCTACTTATATCGG
CATTTACTGTCCCTCACGTGTCTTGCACAGGCCGCGGGCGTGCAGATTGG
TGATTTGGTTGTGTCCATAGATAATATTGTGGTGGATACGCCCAGGGCGT
TGGCACAACGACTGAAAAACGACAATCTGGCTCAGTCGGGAAAGTTCGCC
ATCATGAAGGTGGGCCTCGGCGTTCGTCGTGGCAAAGGCTCATGTTGGTC
ACAGAATAACGTGCGGAAAATATGTTTTGGATTGGGCAAAGGCGGGGAGA
GTACCGTTTGCGTAATGAGTCACCATCATTCATTGCTCCTATATGATCTG
ATCTCACTGTGACTTGATTTGCCGGGGCGTTTTATGGCTCATATTTTCAT
GCCACCGTATGCAGGTGTTGACGCGTGTGCCGCTAATTGATGGGCTTGGT
GAGCCACTGACAAGTGCCATGAATTACAGCGGAATAGACGTGGTGAAGGT
GAATACCGGAACCCTCTGTTAGAGCTGGCCGAGAGTCTTGATCGTGATTG
ATTCGCCTGAAGCTGCCCACACTGGCGGATATGTAAAACGCTCTCGATGT
ACTACTGTACCGCTGTGGCGCCTTTGGAGTGCGGTTGATGTGCTGCGACG
CGCAGCCCTTCAAGAGTAGCATCTAGTGCTAGTCCCTCGTGGCGCGTATT
TGATATGGTCTCGGTTCATTGGTGAATGTCCCCACCCAAATGCTTCAGTT
GCTAGACACTCTCGTGTACGATGGAGTCTTCTATTTCTTACGTAGTATGG
CGGTCTCGACAGGGAACATAAACCCTGCCCTCCACCCCTAGGGGTAGCCA
TTTCCCCCGCTCTATAGTATATACCAGTACCTACTGTCGCGTTTTGGCAA
ATAAAGTATCCACTCATTGGCGGTTTTTATCCTTTCTCTCCGCTTCGTTC
TTCTAGGGCGCTTTGCTTGAAGGAGAAATCATGCTCCATCACAATTTCGT
TATTGGCGCTGACTGGAAGGGGCAGACCTGCCGCGAGTGGAGACAAGGAG
TTTCATTCGCCGGGCAAGGCGTCGGTCAGGGCTGGGGACATGGGGCATTG
TCGGTCGTGGAAGCGACACCAGGGCAAACGGATAAGGAGGAAGCCGTGCC
GTTGCCTCCTGGACACAGTCCGCCATTGCACAGAGAGGGCGCGTTGGAGC
TCGGGCCCAGCACGAAGGAGGCCGTGAGAGACGCTGTGAAGGACCTGGGT
AGGAGGATGCTGCAACTGGAAGCCTTGGTCTTTAAGCAAGACATGTGAGA
AAACGGATTCTTGCTTAGTCGTGGCACGATGTGTATGTTCGCCCCCGAAG
CACCGCATGACTTACGCAATGTCTACGGCGTACGGTGTACGAGATGGCCT
TACAATGAAATTATTCATGCTCCCTTTGGAAGATTGTGCTTATACGGTAG
CGCATCCGCTTGCCTTCTAAACCATTCTGTGCTTAACGTTCGTCTTCGTT
TCTTTGGTGGGGTGTTATCTACAGAGTCGTGGATGCACGGTGGGTGGAGA
AAGACCGACGCCGCAAGTGGCGGACGTCCGTTCACAACGCGCAGACGGCA
GTGCAACTTCTCGCAGCATGGGGAACGTTTTGGGTGAGTCATCTGGCTCG
TTGTTTGGCTTGATAAAACTGATAAAACTACTTTGTAGCAGTCTAATGCA
GATTAAGGTGTTGCTCGGGATTTGCTGTGCTCTTAATATATAATTTACTA
GCACCTTCCATCTTTTACCCGCGCCTTCGGTATGCTGAGCTTCTTACAGC
TACTATGAGGAGCATCCTCGAAATTGGAACGTATGAGGCATGGGGTGATC
TTACTTGGTTATCGACGTGTTCCGCAGGAGATGATCGACTGGGAGGCGGC
ATGCGGTTGCTATTCGGAACTCGACCGCCGAAAATTTATGTCTTTGCTGC
CATCGAACGCGCGGAACGCTATACCGGACAAGGGAGACAGCGTGATTTAC
TTTGGCGACGGACACATGCTCTCTGTCGAGGCCGAGGTGTGTCCCACGTC
ACCGGCGGGGTTTTTTCAAAGTTATCTGAGCGGCCCCTTGGGCAGGTTGC
CGATCTGCCTGGTCTCTCGATTTCTACAGTAGAGGTAATATGGGGGTGCC
GTAGAATGCTTTGGTAGCATGCTTTGGCGCTAGGTGAGCGGTCACCCACA
TTGTTTTCAACTTAAGATTCAAGACCATCCTCCGTTTTGTTTCAAAATTG
TCTAATCGTGAACGGCCTGATTTTCCCCCGGAGGAAGGCGAGGCACCGAG
CCGCGTGCGGGAGCGATGCGCCAAGGCCAGGGGCGATCAAGCAGTGTACC
GTGAAGTCCATATCCTATCATGGGGGAGGTTCACAGCGGAGGGCCAAGGG
GGCGCAGCCCTTCGCGACGATGGATCTGGAGGTAATACGGTAAACAGACG
CAATGTTGGGGTCCGAGGATATTGGTTTTGGGCCGCTCCCGAGTCTGTAC
TGAGGAGACGCTTTGTTGAGATTGTTTCAATACGTTCATCCCCCTCAACC
CCTCCTTTTTTGGTTGTCCATGAAATTTTGTGACTATCAATATCTGCATC
TTGACCGTTCGTAGATGGAACGTTTGCGGGAATAGTCTGAAGTCCAGTTT
TGTTTTACGTGGTAAAACTTCATTATGAGGACTTTCGGGGTGTTGTGTTA
TGGCCATATGCCGGTTCTTTACAGAAAGTGAAATAGAACATCTTCCCCAC
TTTCGGTAAACTGCTTTGCGTGACATCTACCTCAGCCACTGCCGGAACCG
GAATCTTTCCCCGAACTGGGCTTGCTCGCGCGGTCGGAGCCGTTTGGCAC
CCTCAACCGCCTTTTAAAAAGATCAATCAAGGCCATGAGGGAAACACCGG
ACGTTGTGTATTTTCTTGAGCCTTTCAGCAGGACCATCTACCCAGGTGAG
GCCGTGGTGCCCTGATGATTGCCCTCCTTGCTTCATCCCATCCTGCTACC
CTGTGTGGGATATGTTAAAGTCGAAAAAAGTGAAATGTTAACGTCGAAAG
AGTTAAATGTTAACGTTAACAGTGGGTTAAAACCGACATCGAAGGTGGTT
TCACGTTGAAGTGGAAAGCGGTTTTGGGTCTTGGGTATCTATGTTGTATA
GGCTGTCTCATATCCGTGTCACCAGCCCGATTTCACGAGAGTATTACTCG
ATGAGTTGGAACTTGAGAGTGTGCTCCTCCCACCCTAACGGCGAACCTTG
AGCTCCCGTCGGTAGCTCCCGTCGGTATAATGAGTTGTGATGGCCTCCTT
CGCATGACCTCCACCAACACAACGTTGTCTCGTGGCATACAGACTACTAT
GATATAATCTCGGAGCCGATGGACCTGAGCAAGCTGTGGAAGCGCTGTTC
CGCCTGCCGCTACAAGACGGTGAAGCAGTTCAAGTGTGACTTGGAGTTGG
TGGCCTCCAACTGTCGGCTGTATTGTCAGGACAAGTTTCATGATCTTCCT
CCCGCGGCAGACGCGGCTGTTAAGGTGAGAGTATATGTGGTCGCTGGCTT
GTGGGCTGCAAGAGATGGCACCTCGATCGACGGCTTTGGTTTTAAGGGCG
TGTTTGGTAAACAAAGTGTCCCCCCCTGTTTGTGGCGCCTTCTATATGTT
ATAAATAGACATGCTTCAACGACTTGGGGAGATGGCATCAAGGATTAAGT
TGATAATAACTTCTTGGTTTATCTGTTTTTCTCTATCGTTGTTTTACGAC
CGATTCAAGTAGTACGGGTCACAATCGTGACAGCGTTCGTGACTCGGCAT
CTCGTTTTAAAAATCTCGGTGATGCCCAGGTGGGCATGGCGACGCTGGAC
GAGCCAATCCTAGCGGCGGCACTGGAAAAGACGACTGAAGACGGGAATCG
CTTAGAGAGTGTTTGGAACAAGCAGATGTTGGCTGCAATCAACGCTACGC
CCCAACTAGCGACCATGCCGGGGATGCGGAATATCGCAAGGTGTAGTGTG
CCCGAGGCGTACATAAGGCGTGAGCAACATTGGCATGGCTGTTTTAACCT
AACGGGTTTTTTCAATTTGAGCCTTAGTGCACGTTGAACTGCAAAGCGCG
AAACGTTTTGAAGCTACAGGATCCGACGCTCCCTCTTTCCACCTAGCGCT
AGCATTTCAGGTCTCTTGCAAAGTCAACGCAGGAGATATGTACAGCGTAG
ACCTGTGATATCATTGCGTTTGGTGGAAAATCGTATCGATCCTCCAAACG
AGCAGGCAGTTTGGGATTTCCACAGGAGAAGGCGACCATGAAGTGGGTGG
CGGGGATGCATCGGGAACTGAAAGTGATGACGATAGTGGCCAGCCGGGCG
CGGCAAGGATCGCACGGCAGGTTTGTCACGGCCTTGTTATGTCGCCACGC
TATGTGATTTCTAGACAGGGGGCGCCACGTATTTTTTCCTCTTTGCGTTT
TGCTCGCTTCATTTATTCAAGTTACGAGCGTTTATGCCTTGTTGAATTGA
AATGCTCCGCTCGCCAAGAGCGCACTCGACGAGATATTTTCCCTTATTCC
TTCAGTCGACGGATGTCATAAGTGTGTTTTAGGAGTGCTTTATTTCAGCG
TCACATCTCCCCTTCCCGTTTCACCCGCATTTTGTCCACCCCAGGTGTTC
TACGACAAGCTCGTTGGCATCAAATACGGCACATCAAAGGAACGCAAGCC
CTCGCGTATGGGTCCGCGAAACCACAAGGAACAGACCCACTCGAAGCCAC
GAGCGCAACCACGGCAAGGATCAACCGCTGGAACGTCTGAGCAAGCCACT
GATCCCGCAGCATCATGTGTGTCGTCTTCATCTGCGGCCGTCCTTGTCGA
GCATCAATCGCTCGGCGTAGCCGCGAAGGATAACGCCTTAACCTCGGGGA
CCGGGGAAGCCACATCGATGGATGTTGAGTTGGCGGTAGCTCCATCAGAA
GAGTCAATGTTGAAAACATCCTCCGACCGGGCGGGAGCCATTCCGGTCTT
TACAGCAACGGTAAAATCGAAGGACTCCAATCGTTGGGCAGCAGCGGAGG
CGGGTGATGGCGCTGGATTGTCACGGGCTAGAATGGCGCGCGGAGGGGGG
ATACTGGCGAGCGCAGGCGCTAAGGTCGAGCCCGGTTCAGGAGCTCGGGC
CGAAGCTCGGGCCTGTGGGACGCTGAGAGTTTCCATGTGTCTGAGCAATG
AAATACCGGAATTCGTAGTGATGACTTCGAAGTATGAGGACGCGATTCGA
TACCAGTGGAGGTCGGAGATGCGCATTCAGATGGCTTCCACGGAGGATCC
AGGTACGGGCGAGGTGGCTAGTATAGGGGCGAGCATGTAGGCAAAGCTAG
ACGAAATACGTAGCGTAGAATTCCGTACGAATCCGTACTCGTAGCGTGGC
TGCTAGAGTGCTACGTTGCTTCCCTCTCTTGGCACACCTTGAACCAGGCA
GGCCTCGCGCAGCCCTTCTTTTATAGACGCTCGTAGCATCACCGACCAAC
ACTTATAGGCAAAATATCCCTATTGCCAACGACGGCGTCTACAAAAAACA
AAAAGAGACATGTCCGCAATCACAACGCTACCGCCCCTCCACATCCCAAT
GCTGAACCGCTGCGACCTTAGGAGAATCTTTACGCGTGAACAAGGGCATA
CTTGTCGGAGTGAAGTCAAGGGACGAGAGCACGGAGATGATGCCGTGGGA
AAGTCTCGAAGTGGAGTGGGACGACGAGGAAGATATTACTATGGTCAACC
CATGGGAGGTAGAGGCTGTATCGGATGCTACGGAGGCCGCGCGTCACCGC
GCTACCAAGGGCGAGTTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig6680:979..7699+

>mRNA_H-elongata_contig6680.14282.1 ID=mRNA_H-elongata_contig6680.14282.1|Name=mRNA_H-elongata_contig6680.14282.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5490bp|location=Sequence derived from alignment at H-elongata_contig6680:979..7699+ (Himanthalia elongata Himel1 dioecious)
TACATCGAGGACTTGGCGGAGGTGGCCCACGAGAAGGAGCGAGAGCGAGC
GGCTGGAAGGGAGACCATCAAGTCTTCCGGTTTCGTCTCTGACGAGCAAA
GACACGTTCTTCGGCGGCATTGCAGTACATCGAGGACTTGGCGGAGGTGG
CCCACGAGAAGGAGCGAGAGCGAGCGGCTGGAAGGGAGACCATCAAGTCT
TCCGGTTTCGTCTCTGACGAGCAAAGACACGTTCTTCGGCGGCATTGCAG
TTTGCGCGCGGCTCGGCTGAGGTTCGAGCTTAAGACGTCCGCCGTGATCA
TGCGCGACCTCGCCGTGTACATGGGGCCCCACGGCCTGGGCCTAAAGCTA
CGTGTGCACTGCGGTGGCATTGCAGTGTCTGGGCACAGGATGCTCCCCAC
AGGCATTCAAAACTCCGGACAGTTTGCGCGCGGCTCGGCTGAGGTTCGAG
CTTAAGACGTCCGCCGTGATCATGCGCGACCTCGCCGTGTACATGGGGCC
CCACGGCCTGGGCCTAAAGCTACGTGTGCACTGCGGTGGCATTGCAGTGT
CTGGGCACAGGATGCTCCCCACAGGCATTCAAAACTCCGGACAGGCCGCG
GGCGTGCAGATTGGTGATTTGGTTGTGTCCATAGATAATATTGTGGTGGA
TACGCCCAGGGCGTTGGCACAACGACTGAAAAACGACAATCTGGCTCAGT
CGGGAAAGTTCGCCATCATGAAGGCCGCGGGCGTGCAGATTGGTGATTTG
GTTGTGTCCATAGATAATATTGTGGTGGATACGCCCAGGGCGTTGGCACA
ACGACTGAAAAACGACAATCTGGCTCAGTCGGGAAAGTTCGCCATCATGA
AGGTGTTGACGCGTGTGCCGCTAATTGATGGGCTTGGTGAGCCACTGACA
AGTGCCATGAATTACAGCGGAATAGACGTGGTGAAGGTGTTGACGCGTGT
GCCGCTAATTGATGGGCTTGGTGAGCCACTGACAAGTGCCATGAATTACA
GCGGAATAGACGTGGTGAAGGGCGCTTTGCTTGAAGGAGAAATCATGCTC
CATCACAATTTCGTTATTGGCGCTGACTGGAAGGGGCAGACCTGCCGCGA
GTGGAGACAAGGAGTTTCATTCGCCGGGCAAGGCGTCGGTCAGGGCTGGG
GACATGGGGCATTGTCGGTCGTGGAAGCGACACCAGGGCAAACGGATAAG
GAGGAAGCCGTGCCGTTGCCTCCTGGACACAGTCCGCCATTGCACAGAGA
GGGCGCGTTGGAGCTCGGGCCCAGCACGAAGGAGGCCGTGAGAGACGCTG
TGAAGGACCTGGGTAGGAGGATGCTGCAACTGGAAGCCTTGGTCTTTAAG
CAAGACATGGCGCTTTGCTTGAAGGAGAAATCATGCTCCATCACAATTTC
GTTATTGGCGCTGACTGGAAGGGGCAGACCTGCCGCGAGTGGAGACAAGG
AGTTTCATTCGCCGGGCAAGGCGTCGGTCAGGGCTGGGGACATGGGGCAT
TGTCGGTCGTGGAAGCGACACCAGGGCAAACGGATAAGGAGGAAGCCGTG
CCGTTGCCTCCTGGACACAGTCCGCCATTGCACAGAGAGGGCGCGTTGGA
GCTCGGGCCCAGCACGAAGGAGGCCGTGAGAGACGCTGTGAAGGACCTGG
GTAGGAGGATGCTGCAACTGGAAGCCTTGGTCTTTAAGCAAGACATAGTC
GTGGATGCACGGTGGGTGGAGAAAGACCGACGCCGCAAGTGGCGGACGTC
CGTTCACAACGCGCAGACGGCAGTGCAACTTCTCGCAGCATGGGGAACGT
TTTGGAGTCGTGGATGCACGGTGGGTGGAGAAAGACCGACGCCGCAAGTG
GCGGACGTCCGTTCACAACGCGCAGACGGCAGTGCAACTTCTCGCAGCAT
GGGGAACGTTTTGGGAGATGATCGACTGGGAGGCGGCATGCGGTTGCTAT
TCGGAACTCGACCGCCGAAAATTTATGTCTTTGCTGCCATCGAACGCGCG
GAACGCTATACCGGACAAGGGAGACAGCGTGATTTACTTTGGCGACGGAC
ACATGCTCTCTGTCGAGGCCGAGGTGAGATGATCGACTGGGAGGCGGCAT
GCGGTTGCTATTCGGAACTCGACCGCCGAAAATTTATGTCTTTGCTGCCA
TCGAACGCGCGGAACGCTATACCGGACAAGGGAGACAGCGTGATTTACTT
TGGCGACGGACACATGCTCTCTGTCGAGGCCGAGGTGAAGGCGAGGCACC
GAGCCGCGTGCGGGAGCGATGCGCCAAGGCCAGGGGCGATCAAGCAGTGT
ACCGTGAAGTCCATATCCTATCATGGGGGAGGTTCACAGCGGAGGGCCAA
GGGGGCGCAGCCCTTCGCGACGATGGATCTGGAGGAAGGCGAGGCACCGA
GCCGCGTGCGGGAGCGATGCGCCAAGGCCAGGGGCGATCAAGCAGTGTAC
CGTGAAGTCCATATCCTATCATGGGGGAGGTTCACAGCGGAGGGCCAAGG
GGGCGCAGCCCTTCGCGACGATGGATCTGGAGCCACTGCCGGAACCGGAA
TCTTTCCCCGAACTGGGCTTGCTCGCGCGGTCGGAGCCGTTTGGCACCCT
CAACCGCCTTTTAAAAAGATCAATCAAGGCCATGAGGGAAACACCGGACG
TTGTGTATTTTCTTGAGCCTTTCAGCAGGACCATCTACCCAGCCACTGCC
GGAACCGGAATCTTTCCCCGAACTGGGCTTGCTCGCGCGGTCGGAGCCGT
TTGGCACCCTCAACCGCCTTTTAAAAAGATCAATCAAGGCCATGAGGGAA
ACACCGGACGTTGTGTATTTTCTTGAGCCTTTCAGCAGGACCATCTACCC
AGACTACTATGATATAATCTCGGAGCCGATGGACCTGAGCAAGCTGTGGA
AGCGCTGTTCCGCCTGCCGCTACAAGACGGTGAAGCAGTTCAAGTGTGAC
TTGGAGTTGGTGGCCTCCAACTGTCGGCTGTATTGTCAGGACAAGTTTCA
TGATCTTCCTCCCGCGGCAGACGCGGCTGTTAAGACTACTATGATATAAT
CTCGGAGCCGATGGACCTGAGCAAGCTGTGGAAGCGCTGTTCCGCCTGCC
GCTACAAGACGGTGAAGCAGTTCAAGTGTGACTTGGAGTTGGTGGCCTCC
AACTGTCGGCTGTATTGTCAGGACAAGTTTCATGATCTTCCTCCCGCGGC
AGACGCGGCTGTTAAGGTGGGCATGGCGACGCTGGACGAGCCAATCCTAG
CGGCGGCACTGGAAAAGACGACTGAAGACGGGAATCGCTTAGAGAGTGTT
TGGAACAAGCAGATGTTGGCTGCAATCAACGCTACGCCCCAACTAGCGAC
CATGCCGGGGATGCGGAATATCGCAAGGTGGGCATGGCGACGCTGGACGA
GCCAATCCTAGCGGCGGCACTGGAAAAGACGACTGAAGACGGGAATCGCT
TAGAGAGTGTTTGGAACAAGCAGATGTTGGCTGCAATCAACGCTACGCCC
CAACTAGCGACCATGCCGGGGATGCGGAATATCGCAAGCAGGCAGTTTGG
GATTTCCACAGGAGAAGGCGACCATGAAGTGGGTGGCGGGGATGCATCGG
GAACTGAAAGTGATGACGATAGTGGCCAGCCGGGCGCGGCAAGGATCGCA
CGGCAGCAGGCAGTTTGGGATTTCCACAGGAGAAGGCGACCATGAAGTGG
GTGGCGGGGATGCATCGGGAACTGAAAGTGATGACGATAGTGGCCAGCCG
GGCGCGGCAAGGATCGCACGGCAGGTGTTCTACGACAAGCTCGTTGGCAT
CAAATACGGCACATCAAAGGAACGCAAGCCCTCGCGTATGGGTCCGCGAA
ACCACAAGGAACAGACCCACTCGAAGCCACGAGCGCAACCACGGCAAGGA
TCAACCGCTGGAACGTCTGAGCAAGCCACTGATCCCGCAGCATCATGTGT
GTCGTCTTCATCTGCGGCCGTCCTTGTCGAGCATCAATCGCTCGGCGTAG
CCGCGAAGGATAACGCCTTAACCTCGGGGACCGGGGAAGCCACATCGATG
GATGTTGAGTTGGCGGTAGCTCCATCAGAAGAGTCAATGTTGAAAACATC
CTCCGACCGGGCGGGAGCCATTCCGGTCTTTACAGCAACGGTAAAATCGA
AGGACTCCAATCGTTGGGCAGCAGCGGAGGCGGGTGATGGCGCTGGATTG
TCACGGGCTAGAATGGCGCGCGGAGGGGGGATACTGGCGAGCGCAGGCGC
TAAGGTCGAGCCCGGTTCAGGAGCTCGGGCCGAAGCTCGGGCCTGTGGGA
CGCTGAGAGTTTCCATGTGTCTGAGCAATGAAATACCGGAATTCGTAGTG
ATGACTTCGAAGTATGAGGACGCGATTCGATACCAGTGGAGGTCGGAGAT
GCGCATTCAGATGGCTTCCACGGAGGATCCAGGTGTTCTACGACAAGCTC
GTTGGCATCAAATACGGCACATCAAAGGAACGCAAGCCCTCGCGTATGGG
TCCGCGAAACCACAAGGAACAGACCCACTCGAAGCCACGAGCGCAACCAC
GGCAAGGATCAACCGCTGGAACGTCTGAGCAAGCCACTGATCCCGCAGCA
TCATGTGTGTCGTCTTCATCTGCGGCCGTCCTTGTCGAGCATCAATCGCT
CGGCGTAGCCGCGAAGGATAACGCCTTAACCTCGGGGACCGGGGAAGCCA
CATCGATGGATGTTGAGTTGGCGGTAGCTCCATCAGAAGAGTCAATGTTG
AAAACATCCTCCGACCGGGCGGGAGCCATTCCGGTCTTTACAGCAACGGT
AAAATCGAAGGACTCCAATCGTTGGGCAGCAGCGGAGGCGGGTGATGGCG
CTGGATTGTCACGGGCTAGAATGGCGCGCGGAGGGGGGATACTGGCGAGC
GCAGGCGCTAAGGTCGAGCCCGGTTCAGGAGCTCGGGCCGAAGCTCGGGC
CTGTGGGACGCTGAGAGTTTCCATGTGTCTGAGCAATGAAATACCGGAAT
TCGTAGTGATGACTTCGAAGTATGAGGACGCGATTCGATACCAGTGGAGG
TCGGAGATGCGCATTCAGATGGCTTCCACGGAGGATCCAGGAGAATCTTT
ACGCGTGAACAAGGGCATACTTGTCGGAGTGAAGTCAAGGGACGAGAGCA
CGGAGATGATGCCGTGGGAAAGTCTCGAAGTGGAGTGGGACGACGAGGAA
GATATTACTATGGTCAACCCATGGGAGGTAGAGGCTGTATCGGATGCTAC
GGAGGCCGCGCGTCACCGCGCTACCAAGGGCGAGTTGTGAGAGAATCTTT
ACGCGTGAACAAGGGCATACTTGTCGGAGTGAAGTCAAGGGACGAGAGCA
CGGAGATGATGCCGTGGGAAAGTCTCGAAGTGGAGTGGGACGACGAGGAA
GATATTACTATGGTCAACCCATGGGAGGTAGAGGCTGTATCGGATGCTAC
GGAGGCCGCGCGTCACCGCGCTACCAAGGGCGAGTTGTGA
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