mRNA_H-elongata_contig118503.1428.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: D7G0U6_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U6_ECTSI) HSP 1 Score: 219 bits (558), Expect = 3.230e-69 Identity = 95/116 (81.90%), Postives = 111/116 (95.69%), Query Frame = 1
Query: 1 EDDLGAGRASYGDDLETLDKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFKTPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSAHNLC 348
ED+LGAGRASYGDDL+TLD+RR+EEL+LIGE+DSA INPRRECWF+VDTKWLQ+WAKFVRGEGPPPGRISN+ LV+DD KTP++GLV++VDYRGVNP VWFLY+EMYGKDSA +LC
Sbjct: 59 EDELGAGRASYGDDLDTLDRRRTEELRLIGEFDSANINPRRECWFIVDTKWLQTWAKFVRGEGPPPGRISNKGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLC 174
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A6U1BH02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BH02_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.650e-34 Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 EDDLGAGRASYGDDLETLDKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFKTPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSAHNLC 348
EDDLGA ++LE L++RRS EL L+ ++D INPRRECWF++DT W++ W+ ++ G+ PGRISN L + D +T LV K DYRG++P +W+++VE+YGKD+A LC
Sbjct: 27 EDDLGA---LTPEELELLEERRSAELALVSKFDKTEINPRRECWFLIDTTWIRDWSLYMEGKRDSPGRISNLNLFEADERTVKRKLVPKQDYRGLSPLMWYIFVELYGKDAAPELC 139
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: K3WJJ2_GLOUD (DUSP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJJ2_GLOUD) HSP 1 Score: 98.6 bits (244), Expect = 1.160e-21 Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 46 ETLDKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFK------------TPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSA 336
E LDKRR EL L+ +YD ATI R+ECWF++D W+ +W F GP PG I+NE L++ ++K TP +GL A+ DYR V P V+ L+VE++G A
Sbjct: 428 EDLDKRRKMELALVVKYDKATIG-RKECWFVIDANWMNNWVNFAARGGPLPGPITNEVLLEPNWKERLEGLAPGRADTPRKGLTAQKDYRCVTPMVFCLFVELHGMGEA 535
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A7S3M225_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M225_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.250e-21 Identity = 44/98 (44.90%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 61 RRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRG-EGPP-PGRISNEALVQDDFKTPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSAHNLC 348
R+ +ELKL+ ++D + IN +ECWF+VD+ WL W+ FV G +G PG +S + L+ D P+ L+ DYRGV P V+F+++E+YGKDS+ LC
Sbjct: 41 RKKQELKLVKKFDKSAINVAKECWFLVDSDWLNKWSAFVNGGDGEDSPGPLSTKELL-DAQDIPLLNLMPIRDYRGVPPIVYFIFLELYGKDSSPELC 137
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: K3WJJ1_GLOUD (DUSP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJJ1_GLOUD) HSP 1 Score: 93.2 bits (230), Expect = 8.230e-20 Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 46 ETLDKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFK------------TPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSA 336
E LD RR EL L+ ++D I+ R+ECWF+VDT+W+ W FV GP PG I+NEAL+Q D+ P EGL V YR VNP VW + E++G A
Sbjct: 346 EDLDLRRKLELALVMKFDKRKIS-RKECWFLVDTQWMARWVAFVGQNGPLPGPITNEALLQPDWHERLRGELPGEPDAPREGLERMVHYRCVNPMVWCILSELHGPGDA 453
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A485L9L2_9STRA (Aste57867_18151 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9L2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.560e-19 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 55 DKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFKT------------PIEGLVAKVDYRGVNPTVWFLYVEMYG 324
++RR EEL + ++++ T+ PR CW ++D W++ W +F +GPPPG ISNE+LVQDD+K P +GL DYR V P VW + VE++G
Sbjct: 6 ERRRREELFFVQKHEATTL-PRGHCWLLLDADWMERWWQFAAADGPPPGPISNESLVQDDWKLRILGDVPGDPDLPRDGLQLGRDYRCVTPLVWCVLVELHG 106
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A6G0XFM4_9STRA (DUSP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFM4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.830e-18 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 55 DKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQD------------DFKTPIEGLVAKVDYRGVNPTVWFLYVEMYG 324
++RR EEL + ++++ +I+ R +CWFM+D +W+ W K+ +GPPPG ISNE +VQ+ D P E L VDY V P VW + VE++G
Sbjct: 6 ERRRKEELFFVQQHEATSIS-RGQCWFMLDAQWMDRWWKYATNDGPPPGPISNEGIVQEGWELRLHGDAPGDADLPRENLQLSVDYHCVTPLVWCVLVELHG 106
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A6H5L668_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L668_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 6.040e-18 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 1
Query: 196 PGRISNEA-LVQDDFKTPIEGLVAKVDYRGVNPTVWFLYVEMYGKDSAHNLC 348
P I EA LV+DD KTP++GLV++VDYRGVNP VWFLY+EMYGKDSA +LC
Sbjct: 21 PSTIELEADLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLC 72
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A485L0V2_9STRA (Aste57867_13847 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0V2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.650e-17 Identity = 44/102 (43.14%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 55 DKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQD------------DFKTPIEGLVAKVDYRGVNPTVWFLYVEMYG 324
D RR EE L+ D+ I R ECW +VD KW++ W F GPPPG I+NE LVQD D P EGL VDYR V P VW + ++G
Sbjct: 244 DLRRKEEFTLMKLNDATKIE-RGECWMVVDAKWVERWVTFAALNGPPPGPINNEVLVQDGWLERMEGKLPGDADLPREGLKVSVDYRCVTPLVWCFFTALHG 344
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Match: A0A067CS21_SAPPC (DUSP domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CS21_SAPPC) HSP 1 Score: 84.0 bits (206), Expect = 9.450e-17 Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 52 LDKRRSEELKLIGEYDSATINPRRECWFMVDTKWLQSWAKFVRGEGPPPGRISNEALVQDDFKTPIEGLVAK------------VDYRGVNPTVWFLYVEMYG 324
D RR EE + ++D I R ECW ++D KW++ W + GPPPG I+NEALV D ++ + G +A VDYR V P VW +V ++G
Sbjct: 204 FDLRRKEEFTFLKKHDKTKI-ARGECWLVIDAKWIERWVLYAAMSGPPPGPITNEALVMDGWQERLTGAIAGDADLPRPNLKVGVDYRCVTPLVWCFFVALHG 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118503.1428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig118503.1428.1 >prot_H-elongata_contig118503.1428.1 ID=prot_H-elongata_contig118503.1428.1|Name=mRNA_H-elongata_contig118503.1428.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp MILEPGGHLMGMISRLSTSVDPRSSSSSGSTTRQRSIRAGSAGSWSTLSGback to top mRNA from alignment at H-elongata_contig118503:115..1283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig118503.1428.1 ID=mRNA_H-elongata_contig118503.1428.1|Name=mRNA_H-elongata_contig118503.1428.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1169bp|location=Sequence derived from alignment at H-elongata_contig118503:115..1283- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig118503:115..1283- >mRNA_H-elongata_contig118503.1428.1 ID=mRNA_H-elongata_contig118503.1428.1|Name=mRNA_H-elongata_contig118503.1428.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig118503:115..1283- (Himanthalia elongata Himel1 dioecious)back to top |