mRNA_H-elongata_contig6656.14260.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6656.14260.1
Unique NamemRNA_H-elongata_contig6656.14260.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A6H5JG48_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG48_9PHAE)

HSP 1 Score: 699 bits (1804), Expect = 5.860e-249
Identity = 354/512 (69.14%), Postives = 422/512 (82.42%), Query Frame = 1
Query:    1 SQVITGLSDETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSDKQAEFLVDCKEAGAATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSIDGLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNSAY 1536
            S++  G+SD+ LD V +RM +  LK G++LVKEGQPMP  + IE+G+L+RV+   G +D + EFL+D KEAG+ TGLLHVLK G+A PAF T++ARGE+ VW L   DLE+ ++G P+ AM ++ +LA  +RG+SKA     L       G  GGE+F+G +V+CY S+GWVR+NFQAK DKHNE +SP E+I+ DFTSDTLS+SS ++AVGYD VCLFVNDVADG+VL+TLG+ GVGM+ALRCAGFD+VD DAA+ALGLTVARVPAYSPYAVAEHA+ALLMALNR+  RAS RT DANFS+DGL GFD+HGKTVAV+GCGRIGQCLCNILLGFGV+LLCV+AFGEVPDLV+RGAKFVE+EE        W EADVVFLQVPLLPST+HM N+DVLPKLKKGMTLINTSRGGLVDT+ LIKGLRS VI  AGLDVYE+EA YFF+DCS+ PVQ    D VLSELLSFNNVLLT HQAFFTQEAI+ IV+TTF NI+EWR G+KGKAHKNS +
Sbjct:   14 SKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYIETGMLERVKSHSGAADGE-EFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETEVRGRPDFAMGLLGTLAEQMRGQSKARVVAHLKSKAEVTGS-GGERFKGVRVMCYDSSGWVRKNFQAKVDKHNEAASPSERILFDFTSDTLSSSSASAAVGYDVVCLFVNDVADGKVLQTLGMVGVGMVALRCAGFDRVDVDAARALGLTVARVPAYSPYAVAEHAVALLMALNRQTSRASARTHDANFSLDGLCGFDVHGKTVAVIGCGRIGQCLCNILLGFGVKLLCVDAFGEVPDLVKRGAKFVELEEV-------WPEADVVFLQVPLLPSTRHMINDDVLPKLKKGMTLINTSRGGLVDTETLIKGLRSRVIRQAGLDVYENEAPYFFKDCSDTPVQ----DPVLSELLSFNNVLLTSHQAFFTQEAIDGIVNTTFDNISEWRSGSKGKAHKNSVF 512          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A836CGK7_9STRA (2-hydroxyacid dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGK7_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 3.970e-156
Identity = 244/490 (49.80%), Postives = 332/490 (67.76%), Query Frame = 1
Query:   70 LKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSDKQAEFLVDCKEAGAATGLLHVL-KFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSIDGLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNSAY 1536
            +KDG++ + EGQ +  + L+E G L+R R     +  +   +    E G A  +LH+L + G+  P++ TV+A+G A VW +   + +  +   PE A+++++++AA LR  SK      +   I    + G E F+G +++ Y S+ WVRENF    +++N+T+    Q+ +D+T DTLS++S    VG+D VCLFVND AD   L  L   GV MIA+RCAG+D+VD  AA+ LG TVARVPAYSPYAVAEH +ALLMALNRK+++A  R  D NF++DGL GFD+HGKTV VVG G+IGQCLCNILLGFGV L+C + +     L  +GAK+VEM+E        W  + V+FL  PLLPST H+FN +VLPKLK+G+ +INTSRGGLV+TKALI GL+S  +G A LDVYE+EAGYFFRD S+  V     D  L++LLSF+NV+LT HQAFFTQ+AI  IV+TT ANI ++ +G  G+ H NS Y
Sbjct:    1 MKDGDLCISEGQHVDRMILLEDGTLERTRSNPATTSSEPMVIDVVAEKGRALCVLHLLTRAGD--PSYATVKAKGSAVVWEMPREEFQKFMTSAPEYALALMANMAAQLRSGSK------IMRAIRQQ-QSGDENFQGQRILSYDSSAWVRENFTKGIEEYNKTAPAHLQLSIDYTGDTLSSTSAGVTVGHDIVCLFVNDTADRAALMALSNAGVKMIAMRCAGYDRVDAKAAETLGFTVARVPAYSPYAVAEHGVALLMALNRKLYKAIPRVHDFNFTLDGLSGFDMHGKTVGVVGTGKIGQCLCNILLGFGVNLICFDVYPN-DGLKAKGAKYVEMDEI-------WGTSTVIFLMTPLLPSTHHIFNSEVLPKLKRGVYIINTSRGGLVETKALISGLKSGAVGGAALDVYENEAGYFFRDHSDTVVA----DEQLTQLLSFHNVILTAHQAFFTQDAITNIVNTTLANIRDYMEGKTGREHPNSIY 469          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A0G4HDR9_9ALVE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HDR9_9ALVE)

HSP 1 Score: 437 bits (1124), Expect = 5.220e-146
Identity = 242/513 (47.17%), Postives = 328/513 (63.94%), Query Frame = 1
Query:   10 ITGLSDETLDSVAKRMTE---RHLKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSDKQAEFLVDCKEAGAATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGTKVICYGSTGWVRENFQAKADK-HNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSIDGLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNSAY 1536
            ++  + ++ D +AK  T+   + +K GE L+KEG  +   + IESG L R +    ++  + E L+D       TGLLH+L+      ++VTV A  + K+W L+  DL   L+  P   + +I+ LA +LR           S   S PG       +  +V+CY S  WVRE F  +  K H E  + +  I + F++DTL   +V++A GYDAVCLFVND AD E+L+ +   GV MIA+RCAGFD+V   AA+  G TVARVPAYSPYAVAEH ++LLM+LNRK+HRA  R KD NF++DGL GFDLHGKTV V+G G+IG CLC ILLGFGV LLC++ +       ++G  +V ++E        W   DV+F  +PL+ +TKHM N  V+PKLKKG+ +INTSRGGL++T AL++GLRS VI  AGLDVYEHEAG FFRDCS AP+Q    D  LSEL+S NNV+LTGHQAF T+EA++ I DTT  N+  + +G +G+ H N  +
Sbjct:   10 VSVFAKQSEDFIAKLCTKAINKAVKKGETLIKEGAHVEEAYFIESGRLKRTKM---NAKTKEEILIDEVGDNKITGLLHILEPEVHDVSYVTVTALIDTKIWILKKVDLFECLRAEPGAPLKMITWLAHELRQCRTQIRQLKTSSTASEPG------MKNLRVLCYDSAAWVREAFGERLVKFHKEQKALK--IHMTFSADTLGTETVSNAAGYDAVCLFVNDTADPEILQHMSAMGVEMIAMRCAGFDRVHRGAAEIFGFTVARVPAYSPYAVAEHGVSLLMSLNRKIHRAVPRVKDMNFTLDGLTGFDLHGKTVGVLGTGKIGVCLCEILLGFGVNLLCMDPYPNAQLKTRKGVTYVSVDEI-------WPACDVIFFMMPLMEATKHMLNSKVIPKLKKGVVIINTSRGGLIETGALLEGLRSGVIAGAGLDVYEHEAGLFFRDCSAAPIQ----DRQLSELISLNNVILTGHQAFLTKEAVDNIADTTVMNLKLFTEGKRGRDHPNDIF 500          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A7S2U780_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U780_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 5.590e-137
Identity = 236/521 (45.30%), Postives = 335/521 (64.30%), Query Frame = 1
Query:   22 SDETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVRH--------PVGDSDKQAEFLVDC-------KEAGAATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGT-KVICYGSTGWVRENFQAKADKHNETSSPRE-QIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSID-GLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNS 1530
            S+   DS+A +M    ++D  +   EG PM  + +IE G+L R +         P+   D  +E  V+        +  G   G+LH +   ++  A+ T+R++G AKVW + A +L  ++  NP+ ++ +IS +A  +R  SK+     L  L+    + G EK   T +V+CY ST WV ++F+   ++ N+     +  I +D+T+D LS  S   A GYDAVCLFVND A+ +++K L + GV MIA+RCAGFD+VDT AA+A  L+VARVPAYSPYAVAEHA+ LL++LNRK+++AS R + ANF++D G++G D+HGKT+ V+G G+IGQ LCNIL GFG  +LC + F E  DL + GA +V  +E        +   DV+FL +PLLP+T H  NE+VLPKLKKG+ LINT+RGGL+DT ALI GL S +IG  GLDVYE+E+ YFF+D S   V+    D  L+ LL  ++VLLT HQAFFT+EA++ IVDTT  NI+EW+ G  G+ H N+
Sbjct:   21 SESFRDSLAAKMKLVEVQDVHVFATEGMPMENMIIIEQGILVRSKLSGLVDDDLPMMTIDFSSEAAVEASVQLDEIEGRGRIAGILHCVVESDSL-AYATIRSKGPAKVWIVSAQELREVVSSNPQHSLEMISVMAKVMRMSSKS-----LRGLLKNGKQTGKEKGNNTVRVLCYDSTSWVLDSFKPAVEEFNKKFGKSDFTIEMDYTTDRLSPRSSTYAAGYDAVCLFVNDNANSDIIKNLSLLGVKMIAMRCAGFDRVDTKAARAHQLSVARVPAYSPYAVAEHAVTLLLSLNRKIYKASTRVRMANFTLDTGIMGMDIHGKTIGVMGTGKIGQILCNILKGFGSTILCYDVF-ENEDLKKAGATYVSQDEI-------FARCDVIFLMMPLLPATHHTINENVLPKLKKGVLLINTARGGLIDTNALISGLESGIIGGCGLDVYENESEYFFQDWSAKTVK----DPALTSLLGNSHVLLTAHQAFFTKEAVDKIVDTTLNNISEWKKGRHGQEHPNN 523          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A7S3P3U7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3U7_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.160e-129
Identity = 234/531 (44.07%), Postives = 336/531 (63.28%), Query Frame = 1
Query:   19 LSDETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDR-----------------VRHPVGDSDKQA----EFLVDCKEA-GAATGLLHVLKFGEAYPAFVTVRARG-EAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSG---CALSHLISAPGKIGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSID-GLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNS 1530
            +SD  +  +A      H  +G+I V+EG+P+  + ++ESG L R                 +RH   DS  +       +VD  E  G  +GLLH ++ G+A  +F TV A+G + K+W ++ASD  +++  +P+ AM +++++A +LR  +K+  G      SH  SA       K    +V+CY +T W    F     + N+  S    I + FT++ LS ++   A G+DAVCLFVND A  EVL+TL + GV MIA+RCAGFD+VDT AA+A G+TVARVPAYSPYAVAE A+ALLMA+NRK H AS R K ANF++D GL+G D+HGKTV V+G G+IGQ +C+I++GFGV LLC + + E   +  +G K+V ++E        + ++D++ L +PL+  T H  NED+L KLK G+ +INTSRGGLVDTKAL+KGL+S VIG  G+DVYE+E+ YFF+D S   ++    D  L  LL  NNV+LT HQAFFT+EA+N IV+TT +N+ +++ G +   H N+
Sbjct:   20 VSDALVHRIAAVAQPVHAVEGQIFVEEGKPIEDIIVLESGSLIRTRLAKSDPKELKASRNSIRHLRHDSRMEVILETSVVVDTLEGKGRVSGLLHSIRPGKA--SFATVTAKGNDTKLWLIKASDFRAIIGESPDYAMDIMAAMARELRTGTKSLRGLMEATHSHDQSASYDPNVPKM---RVMCYDATSWTSTGFGDALKRWNKEHSSDLYIDMQFTTERLSENTATFAAGFDAVCLFVNDDASVEVLRTLSLLGVRMIAMRCAGFDRVDTKAAKAFGMTVARVPAYSPYAVAEMAVALLMAVNRKTHHASNRVKMANFTLDAGLMGIDIHGKTVGVMGTGKIGQIMCDIMIGFGVNLLCFDPY-ENQGIKDKGGKYVSLDEI-------YAQSDILMLAMPLMKPTYHTINEDMLHKLKPGVIIINTSRGGLVDTKALLKGLKSGVIGGVGMDVYENESEYFFQDWSAKHIK----DEDLMSLLGNNNVVLTAHQAFFTKEAVNQIVNTTLSNLLDYQSGKRSLEHPNN 533          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A7S3P4I9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4I9_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 6.330e-129
Identity = 230/536 (42.91%), Postives = 332/536 (61.94%), Query Frame = 1
Query:   22 SDETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVR----HP------------VGDSDKQAEFLVDC------KEAGAATGLLHVLKFGEAY--PAFVTVRARGE-AKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGT-------KVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSID-GLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNS 1530
            SD  +  +A  M    +K+G+IL++EGQ +  + ++E G L R +    HP            V D+++    L +       ++ G  TGLLH ++  +     +F TV A G+  KVW L   D  ++L  +PE +M +++++A +LR  +K+  G     + +A  K   E+ +         KV+CY +T W    F+    ++N+    +  I + FT++ LS  + + A GYDAV LFVND A  +VL+TL + GV MIA+RCAGFD+VDT AA+A  +TVARVPAYSPYAVAEHA+ALLM LNRK+H AS R + ANF++D GL+G D+HGKTV ++G G+IGQ +C+I+LGFGV LLC + + E  D+  +G K+V ++E        + ++D++ L +PL+  T H  N+D+L KLK G+ LINTSRGGLVDTKAL+KGL+S +IG  G+DVYEHE  YFF+D S   ++   L H+L      NNV+LT HQAFFTQEA+  IV TT  N+ ++  G  G AH N+
Sbjct:   24 SDGLVQRLAACMKPLAVKNGQILIEEGQTLSDILVLEQGQLLRTKYAANHPNDVSESLQHLRSVADNERLDYVLANSVVVDKLEQRGRVTGLLHAIRPEDESNNTSFATVIAVGDNMKVWILSGDDFRNVLAESPEYSMEIMAAMATELRSGTKSLRGL----MEAAQQKKKTERSDSMDSNVTTCKVLCYDATQWTTTGFEGAVKEYNKQHKDKVYIDMHFTNERLSEQTASFAAGYDAVSLFVNDNASAQVLQTLSLLGVRMIAMRCAGFDRVDTQAAKAYDMTVARVPAYSPYAVAEHAVALLMTLNRKIHHASNRVRMANFTLDAGLMGMDIHGKTVGIMGTGKIGQIMCDIMLGFGVTLLCYDPY-ENQDVKDKGGKYVSLDEI-------YAQSDILMLAMPLMKPTYHTINDDMLSKLKPGVLLINTSRGGLVDTKALLKGLKSGIIGGVGMDVYEHEQDYFFQDWSAKHIKDEDLMHLLGN----NNVVLTAHQAFFTQEAVTQIVQTTLNNLRDFSTGQTGLAHPNN 543          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A1Z5K380_FISSO (D-lactate dehydrogenase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K380_FISSO)

HSP 1 Score: 379 bits (972), Expect = 1.340e-122
Identity = 231/526 (43.92%), Postives = 311/526 (59.13%), Query Frame = 1
Query:   34 LDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSD---------------------KQAEFLVDCKEAGA-ATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGT--KVICYGSTGWVRENFQAKADKHNETSSPRE-QIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSIDG-LVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAK-GKAHKNS 1530
            +  +A++M   +++DG    +EG+ + ++ ++E G+L R +  V +SD                       +  L+D     A  TGLLH  K G    A+ TV A+G  K W +E       +   P  A+ ++S+L+ +LR  +K+    AL     A  + G    E    KV+CY +T W  E F+    + NE        I ++FT++ LS  S   A GY AVCLFVND A+  V++TL + GV MIA+RCAGFD+VDT AA+A GLTVARVPAYSPYAVAE  IALLM++NRK+HRA+ R + ANF++DG L+G D+HGKTV V+G G IG  LCNIL GFG  +LC +   E PD++ +G K+V  EE          ++D++FL +PLLP TKH  N D L  LKKGM LINTSRGGL+DTKAL+KGL+   I  AGLDVYE+E  YFF+D S   V     D  L  LL  N V+LT HQAFFTQEA++ IV  T  N+ ++    K G  H N+
Sbjct:   25 VQELARQMQCLNVEDGHNFFEEGEEIHSVLILEEGMLVRTKMSVDESDVAELRSSLREMPSEHSESASSDDSSVLIDMISGRAQVTGLLHNFKAGAV--AYATVSAKGSVKAWLIEGEKFREAITKEPAYALEMMSALSRELRVGTKSLQ--ALVRHSKAGHREGNATTEQKVCKVLCYDATSWTIEGFEPAIKEFNEQHKEEGISIEMEFTTERLSEHSAIFAAGYSAVCLFVNDTANSNVIQTLSLLGVRMIAMRCAGFDRVDTKAARAFGLTVARVPAYSPYAVAEMGIALLMSVNRKIHRANNRVRMANFTLDGGLMGIDIHGKTVGVMGTGNIGAILCNILFGFGANVLCYDVH-ENPDVLDKGGKYVSKEEILS-------QSDILFLMMPLLPPTKHTINFDTLKLLKKGMILINTSRGGLIDTKALLKGLQDGTIAGAGLDVYENEQEYFFQDWSAKTVT----DSDLVALLGNNKVVLTAHQAFFTQEAVDKIVSDTIQNLTDYYHSNKSGIRHPNN 534          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A1Z5K393_FISSO (D-lactate dehydrogenase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K393_FISSO)

HSP 1 Score: 363 bits (932), Expect = 1.380e-115
Identity = 222/528 (42.05%), Postives = 308/528 (58.33%), Query Frame = 1
Query:   25 DETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSD--------------------KQAEFLVDCKEAGA-ATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGT--KVICYGSTGWVRENFQAKADKHNETSSPRE-QIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSID-GLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAK-GKAHKNS 1530
            D  +  +A  MT  H++DG I ++EG+ +  + ++                                    + +  L+D     A  TGLLH  K G    A+ TV A+G  K W +E      ++   P  A+ ++S+L+ +LR  +K+    AL     A  + G    E    KV+CY +T W  E FQ    + N+        I ++FT++ LS  S   A GY+AVCLFVND A+  V++TL + GV MIA+RCAGFD+VDT AA+A GLTVARVPAYSPYAVAE  IALLM++NRK+HRA+ R + ANF++D GL+G D+HGKTV V+G G+IG  LC+IL GFG  ++C +   E P+++++GA +V  EE          ++D++FL +PLLP TKH  N + L  LKKG+ LINTSRGGL+DTKAL+KGL+   I   GLDVYE+E  YFF+D S   V     D  L  LL  N V+LT HQAFFTQEA++ IV+ T  N+ ++    K G+ H N+
Sbjct:  102 DGLISELAAIMTPIHVEDGHIFIEEGEEIRGILVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQDSSVLIDTISGRAQVTGLLHNFKAGAV--AYATVSAKGSVKAWLIEGEKFREVITKEPAYALEMMSALSRELRVGTKSLQ--ALVRHSKAGHREGNATTEPKVCKVLCYDATSWTIEGFQPAIKEFNKQHKEEGISIEMEFTTERLSEHSAIFAAGYNAVCLFVNDTANSNVIQTLSLLGVRMIAMRCAGFDRVDTKAARAFGLTVARVPAYSPYAVAEMGIALLMSVNRKIHRATSRVRMANFTLDAGLMGVDIHGKTVGVMGTGKIGAILCSILRGFGANVICYDV-SENPEVLEKGAIYVSKEEILS-------QSDILFLMMPLLPPTKHTINFETLKLLKKGLILINTSRGGLIDTKALLKGLQDGTIAGVGLDVYENEQDYFFQDWSAKTVT----DADLVALLGNNKVVLTAHQAFFTQEAVDKIVEETVQNLTDFYHANKTGRHHPNN 613          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A448ZFV4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFV4_9STRA)

HSP 1 Score: 359 bits (922), Expect = 2.390e-115
Identity = 218/516 (42.25%), Postives = 309/516 (59.88%), Query Frame = 1
Query:   25 DETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDRVRHPVGDSDK------------QAEFLVDCKEAGAA-TGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAPGKIGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSID-GLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRDGAKGKAHKNS 1530
            D  L + A+ M    ++DG I +KEG+ +  +  +E+G L R +  V + ++            +    +D    G   TG+ H  +   A  AF TV + G  K+W + +    +++   PE +M V++++A  +R  SK+     L  +     K   E     K++ Y ST WV ENF A   K NE +    +I +D+TS+ LS+ +   A GYD VCLFVND A+ + +K L    V MI  RCAGFD++DT AA A G+++ARVPAYSPYAVAE A++LLM +NRK+ +AS R K +NFS+D GL+G D+HGKTV V+G G+IGQ LCNI+ GFG  L+C + F E   + + G K+V   E        + ++DV+FL +PLLP TKH  N D+L  LK GM LIN+SRGGLVDTKA++KG++  +I   G DVYE+E+ YFF+D S   V     D  L  L+  NNVLLT HQAFFTQEA++AIV+TT +N+  + +G     H N+
Sbjct:   18 DALLAAWAEIMEPIEVEDGHIFIKEGEVIKNIVFVENGKLVRTKLSVPEEERAGILEAGLEKIRENSIKIDEVLPGTTPTGVWHSFEADRA--AFATVASSGPCKIWLMPSEKFRAVIS-RPEFSMVVMAAMANRIRVGSKSIRNL-LEKVKDGASKDSCENV--IKMLSYDSTSWVVENFDAALVKFNEDNKNDLKIEIDYTSERLSSKTAHYACGYDVVCLFVNDTANADTIKILRKCEVKMICNRCAGFDRIDTKAALAYGVSLARVPAYSPYAVAEFAVSLLMGINRKIAKASTRVKMSNFSLDSGLMGTDIHGKTVGVMGTGKIGQILCNIIKGFGANLICFDVF-EADAVKEMGGKYVTKGEL-------FAQSDVIFLMMPLLPPTKHTINADMLHLLKPGMLLINSSRGGLVDTKAVLKGIQDGIIAGYGADVYENESDYFFQDWSAKAVP----DPTLVALMGSNNVLLTAHQAFFTQEAVDAIVNTTLSNVKLFTEGKTMYDHPNN 515          
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Match: A0A7S3QJE4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJE4_9STRA)

HSP 1 Score: 356 bits (913), Expect = 1.430e-113
Identity = 221/547 (40.40%), Postives = 316/547 (57.77%), Query Frame = 1
Query:   40 SVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDR-------------VRHPVGDS------------DKQAEFLVDCKEAGAATGLLHVLKFGEAYPAFVTVRARGEAKVWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLIS--------------------APGK---IGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSDTLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKVDTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANFSIDG-LVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDLVQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLKKGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNAPVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWR-DGAKGKAHKNS 1530
            ++A +M    +++G +   EG  + ++ +IESG L R             V    G+S            +K +  L +    G  TG+L V+   E   ++ T+R+ G + VW + A D  ++L  +   AM ++  +A  ++  SK+     L +++                     A GK       +    +V+CY +T WV+  F+      N+  S    I +DFT+D LS  S   A GYDAVCLFVND A+   L+ L + GV  IA+RCAGFD+VD  +A+A GLTVARVPAYSPYAVAEHAI+LLM++NRK+  AS R K ANF++D  L+G D+HGKTV ++G G++GQ LC IL GFG  L+C + F E  ++ + GA++V  +         ++EAD++FL +PLLP+T H  N D + K+K G+ LINT+RGGL+DTKALI GL+S  IG  GLDV E+EA YFF+D S   ++    D  L+ LL  N V+LT HQAFFT+EA++ IVDTT  NI  W+ DG +G  H N+
Sbjct:   20 TLASKMIREEVEEGHVFFWEGTVIDSIIIIESGRLMRSKAVDREKFSLSAVMEQGGESSSSSTPFQKELFEKNSVDLDEISGKGRVTGMLRVIN-EEHSRSYATLRSVGRSVVWRIPADDFMNILSSDAGFAMMMLRKVAHKMKAGSKS-----LKNMLKNSKKTFRRGPSSSLEDEDDDAKGKDTISSPSRKAPVRVLCYDTTQWVKSAFEPAVQAFNKLHSSF-NIEMDFTNDRLSEQSSMYAAGYDAVCLFVNDSANANTLRILSMLGVRFIAMRCAGFDRVDAKSAKAHGLTVARVPAYSPYAVAEHAISLLMSINRKIPAASTRVKMANFTLDNSLLGMDIHGKTVGIMGTGKVGQILCKILNGFGANLICYDIF-ESDEVKKLGAEYVSRD-------YIYEEADILFLMMPLLPTTIHTINADAVSKMKDGVLLINTARGGLIDTKALILGLQSGKIGGVGLDVLENEADYFFQDWSAKAIE----DPELTSLLGNNRVVLTAHQAFFTKEAVSKIVDTTLDNIKMWKNDGLEGLEHPNN 547          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6656.14260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG48_9PHAE5.860e-24969.14Cyclic nucleotide-binding domain-containing protei... [more]
A0A836CGK7_9STRA3.970e-15649.802-hydroxyacid dehydrogenase n=1 Tax=Tribonema minu... [more]
A0A0G4HDR9_9ALVE5.220e-14647.17Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S2U780_9STRA5.590e-13745.30Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S3P3U7_9STRA1.160e-12944.07Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3P4I9_9STRA6.330e-12942.91Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5K380_FISSO1.340e-12243.92D-lactate dehydrogenase n=1 Tax=Fistulifera solari... [more]
A0A1Z5K393_FISSO1.380e-11542.05D-lactate dehydrogenase n=1 Tax=Fistulifera solari... [more]
A0A448ZFV4_9STRA2.390e-11542.25Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3QJE4_9STRA1.430e-11340.40Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6656contigH-elongata_contig6656:1009..8460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score705.3
Seed ortholog evalue2.1e-200
Seed eggNOG ortholog2880.D7FNY8
KEGG rclassRC00044
KEGG koko:K03778
KEGG ReactionR00704
KEGG Pathwayko00620,ko01120,map00620,map01120
GOsGO:0003674,GO:0003824,GO:0004457,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0008150,GO:0008152,GO:0008720,GO:0016491,GO:0016614,GO:0016616,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0055114
EggNOG free text desc.phosphoglycerate dehydrogenase activity
EggNOG OGsCOG0111@1,KOG0068@2759
EC1.1.1.28
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
Ec32 orthologEc-10_004860.1
Exons15
Model size1539
Cds size1539
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931055.549615-CDS-H-elongata_contig6656:1008..10611622931055.549615-CDS-H-elongata_contig6656:1008..1061Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1009..1061 +
1691679679.7215257-CDS-H-elongata_contig6656:1008..10611691679679.7215257-CDS-H-elongata_contig6656:1008..1061Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1009..1061 +
1622931055.56821-CDS-H-elongata_contig6656:1427..14991622931055.56821-CDS-H-elongata_contig6656:1427..1499Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1428..1499 +
1691679679.732386-CDS-H-elongata_contig6656:1427..14991691679679.732386-CDS-H-elongata_contig6656:1427..1499Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1428..1499 +
1622931055.5801375-CDS-H-elongata_contig6656:1776..19511622931055.5801375-CDS-H-elongata_contig6656:1776..1951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1777..1951 +
1691679679.7408419-CDS-H-elongata_contig6656:1776..19511691679679.7408419-CDS-H-elongata_contig6656:1776..1951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 1777..1951 +
1622931055.5949225-CDS-H-elongata_contig6656:2435..25581622931055.5949225-CDS-H-elongata_contig6656:2435..2558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 2436..2558 +
1691679679.7534642-CDS-H-elongata_contig6656:2435..25581691679679.7534642-CDS-H-elongata_contig6656:2435..2558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 2436..2558 +
1622931055.6149757-CDS-H-elongata_contig6656:2853..29851622931055.6149757-CDS-H-elongata_contig6656:2853..2985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 2854..2985 +
1691679679.7622957-CDS-H-elongata_contig6656:2853..29851691679679.7622957-CDS-H-elongata_contig6656:2853..2985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 2854..2985 +
1622931055.6327567-CDS-H-elongata_contig6656:3302..33821622931055.6327567-CDS-H-elongata_contig6656:3302..3382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 3303..3382 +
1691679679.772462-CDS-H-elongata_contig6656:3302..33821691679679.772462-CDS-H-elongata_contig6656:3302..3382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 3303..3382 +
1622931055.6472108-CDS-H-elongata_contig6656:4552..46451622931055.6472108-CDS-H-elongata_contig6656:4552..4645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 4553..4645 +
1691679679.795461-CDS-H-elongata_contig6656:4552..46451691679679.795461-CDS-H-elongata_contig6656:4552..4645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 4553..4645 +
1622931055.661524-CDS-H-elongata_contig6656:5088..51661622931055.661524-CDS-H-elongata_contig6656:5088..5166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 5089..5166 +
1691679679.817412-CDS-H-elongata_contig6656:5088..51661691679679.817412-CDS-H-elongata_contig6656:5088..5166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 5089..5166 +
1622931055.6824207-CDS-H-elongata_contig6656:5635..57951622931055.6824207-CDS-H-elongata_contig6656:5635..5795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 5636..5795 +
1691679679.8286374-CDS-H-elongata_contig6656:5635..57951691679679.8286374-CDS-H-elongata_contig6656:5635..5795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 5636..5795 +
1622931055.697775-CDS-H-elongata_contig6656:6091..62321622931055.697775-CDS-H-elongata_contig6656:6091..6232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 6092..6232 +
1691679679.8379242-CDS-H-elongata_contig6656:6091..62321691679679.8379242-CDS-H-elongata_contig6656:6091..6232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 6092..6232 +
1622931055.7127948-CDS-H-elongata_contig6656:6554..66811622931055.7127948-CDS-H-elongata_contig6656:6554..6681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 6555..6681 +
1691679679.847428-CDS-H-elongata_contig6656:6554..66811691679679.847428-CDS-H-elongata_contig6656:6554..6681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 6555..6681 +
1622931055.7261548-CDS-H-elongata_contig6656:7279..74161622931055.7261548-CDS-H-elongata_contig6656:7279..7416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 7280..7416 +
1691679679.857398-CDS-H-elongata_contig6656:7279..74161691679679.857398-CDS-H-elongata_contig6656:7279..7416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 7280..7416 +
1622931055.7385623-CDS-H-elongata_contig6656:7692..77491622931055.7385623-CDS-H-elongata_contig6656:7692..7749Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 7693..7749 +
1691679679.8695354-CDS-H-elongata_contig6656:7692..77491691679679.8695354-CDS-H-elongata_contig6656:7692..7749Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 7693..7749 +
1622931055.7531862-CDS-H-elongata_contig6656:8018..80671622931055.7531862-CDS-H-elongata_contig6656:8018..8067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 8019..8067 +
1691679679.8787034-CDS-H-elongata_contig6656:8018..80671691679679.8787034-CDS-H-elongata_contig6656:8018..8067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 8019..8067 +
1622931055.7678514-CDS-H-elongata_contig6656:8398..84601622931055.7678514-CDS-H-elongata_contig6656:8398..8460Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 8399..8460 +
1691679679.8902938-CDS-H-elongata_contig6656:8398..84601691679679.8902938-CDS-H-elongata_contig6656:8398..8460Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6656 8399..8460 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6656.14260.1prot_H-elongata_contig6656.14260.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6656 1009..8460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6656.14260.1

>prot_H-elongata_contig6656.14260.1 ID=prot_H-elongata_contig6656.14260.1|Name=mRNA_H-elongata_contig6656.14260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp
SQVITGLSDETLDSVAKRMTERHLKDGEILVKEGQPMPALFLIESGVLDR
VRHPVGDSDKQAEFLVDCKEAGAATGLLHVLKFGEAYPAFVTVRARGEAK
VWSLEASDLESMLKGNPELAMSVISSLAADLRGKSKASSGCALSHLISAP
GKIGGEKFEGTKVICYGSTGWVRENFQAKADKHNETSSPREQIMVDFTSD
TLSASSVASAVGYDAVCLFVNDVADGEVLKTLGVFGVGMIALRCAGFDKV
DTDAAQALGLTVARVPAYSPYAVAEHAIALLMALNRKVHRASVRTKDANF
SIDGLVGFDLHGKTVAVVGCGRIGQCLCNILLGFGVRLLCVEAFGEVPDL
VQRGAKFVEMEEARKGIARAWKEADVVFLQVPLLPSTKHMFNEDVLPKLK
KGMTLINTSRGGLVDTKALIKGLRSEVIGMAGLDVYEHEAGYFFRDCSNA
PVQARPLDHVLSELLSFNNVLLTGHQAFFTQEAINAIVDTTFANIAEWRD
GAKGKAHKNSAY*
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mRNA from alignment at H-elongata_contig6656:1009..8460+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6656.14260.1 ID=mRNA_H-elongata_contig6656.14260.1|Name=mRNA_H-elongata_contig6656.14260.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7452bp|location=Sequence derived from alignment at H-elongata_contig6656:1009..8460+ (Himanthalia elongata Himel1 dioecious)
TCGCAGGTAATTACAGGACTATCCGATGAGACTCTCGACAGCGTCGCCAA AAGGTAAGCGTCGTTGCGAAGGAGGGTCTGCATGGGGTCGACCGTCCAAA AGAATAAGAATACTACTGTCTGTGTCACCCTCGCGTGCGCGTTTAGCTCC GACATGCGTTGATTCAAGTTTGCGCGTGCGCCGAGTCAAGGCGCGCGTAG CGCTACTGTCCTTTTCAGCTGCACGCTATGACTTCAACTATAGGGTGTGG AACGACGGCGTTTCATGTTCGCTTGAGGACAGTATATATATATATATATA TATATATATATATGCTACAATGACCCTGTTCGATTCGATTTGTTTTATGT GCGGCCGCACGATCTTTTCGGCCAAGCTTTTTGACTTGCGCGCCTTGTCA ATCCCGGACGTGACGTCAGGATGACCGAGCGGCACCTCAAGGACGGCGAA ATCCTGGTCAAAGAGGGCCAGCCGATGCCAGCCTTGTTCCTGTGAGTACA GAATGTCTTCCACAATAATTCAACGCTCCTAAGTTACAGCACTATCATGC CGTCCGCGGACCATCCCGTGGCTCTATGAAACGGCAATAAATCTAGTGGA GCTAATGATGATATTTTGTGAAGCCAATGAGGACGTATTGTGGAGCAAAT AGCATCATGTGGAGGTGGTAATGAAATATTGCGGAGATTATTGTCGTCCC GGGAAAAAACAGAGAGACCTCGTCCCCGACCCCGCCTTCGCTACCGCCTC AAACAAAATCCCCCCAAGAATCGAGTCCGGAGTGCTTGATCGCGTGAGGC ACCCGGTGGGAGACAGTGATAAGCAAGCGGAGTTCTTGGTCGATTGCAAA GAGGCGGGGGCCGCCACGGGACTTCTTCACGTCCTCAAGTTTGGAGAGGC CTATCCCGCGTTCGTCACCGTCAGGGCACGCGGCGAAGCAAAGGTGACGG GGCGTTGCATTGTGTTGCGCGCGTATCACAGCCAGTGGGGCGTTGGGCGT GAGGCCATCAATTCCAATCTGACTACACATACGTAGAGCGATCGGTTTCG CACTTCTCCATAGTGTATGTATTTGAGCGGTTGCGAACTCCTCGCCCACG CCGATATCGTGTGGGTTTAGATCGCTCAGCCCACGTGACGTCGGATGATC CGATTGCTGCCGAACGTCGGGACCGCACGTTGCCCGGCGATGGATCTACC TCTCCTCCTGCTGCCTCTGCCTTCCTCGTATTAGTGTTTCCCAACGCTGC AAATTGATGCGCTTTAGCAAGTTTCCGTGCATCCCCCCCTCCCCCCCCTT CTCTCTCTTTGGCCTTATTTCGTGTGAAGTATTTGAACTAAACCTGGAGT CCTATCGGCACGCCGCACGGCTGTGTTTGCGTTGCGCTGCCAATAAAACA CACACGCACGCCGCACAAAATTAAAAGGTATGGAGCTTGGAAGCGAGTGA TCTGGAGTCAATGCTCAAGGGTAACCCGGAGTTGGCCATGAGTGTGATCT CGTCGCTCGCGGCGGACCTTCGGGGGAAATCGAAGGCGAGCAGCGGTTGT GTTGTGTTGAGTCTTTGACGGCGATCCCACACGGGTGGCCCCGCTGCCGC ACGCCCCCGCCCCCCCCCACAGCCCGACGAGTTTGAGAGTTTCAAGAAAA ACAAACCATGGTCGCGGTGAATGATCACATTGTCGCTTTTGATCAAAGTA GTGCTTCTGGTCGCCGCAGGGGTTAGGCTCATGGAGCTCGACACTTGATG CGATTGTTTCCCCCCACACTCGAACCACCTGTGCGGTTGGCGTTTGGCGA TTGACGATAAACAAGACGTGCTTATTTTTACCTGTGCGTTGGCAGGCATT GTCCCACCTGATCAGTGCTCCGGGGAAGATCGGTGGGGAGAAATTCGAGG GTACCAAGGTCATCTGTTACGGCTCGACAGGGTGGGTGAGGGAGAACTTC CAGGCCAAGGCCGACAAGCACAATGAGGTGGGGGGATTAATAGTCCGTCC TTCCGTTTCGTCTCTTCATTTGAAGCATTATTCCCACGCTTAGGAGGCTG CTTGATCTCCTGTGGGAGGACGGCGAAGCTCTACTGTGCGAATGCATCAG TGACGCGAACGCGTGAAATTGCACAGGGCAGCTGTCTTGATGTCCAAGCG AGCGTGAGCTGTAGACGAGTTTCCACTTTGGCAACCCAATTTAACTCTAA AGAGCTTTCCCACGCCCAAGAGCTACTTTCTTTAGCTTAGCTTCCTCTAG ATATTCTATCTGAGCGCATGACCCCCCCCACCCCCCCCATGCAGACCTCG AGTCCAAGGGAACAAATCATGGTGGACTTCACTTCTGACACTCTCAGCGC CTCGTCCGTGGCTTCTGCGGTCGGGTGAGAGACAAAATATAGATGAATAA GAGAGGCAGCAGCGGGGGGGGAGGTCTTTCTCTTTTTGCTACTAGAACAC ACATCAGAGTAAGAGTCTCTCATAACCCAAACGCGTCGCGGGAATAATAC GCAAACTAAGCCGGGGAGGGGGATGGGCATAATCCCTTCGAGGAGAGGGT AACCTCGCTCATTTAGGGTTTCATTGAAAAGAGGACCCATCATTGGAAGA AAACGTGCGTGCGACAGCGTGTTCCTCACTTTCTTTATAATGTACCGTAT TGTCGGCGGAGCAGGCTAAACCTAAACGAAAACAAAAAAAAACACGAGGG ATGGGTGTGTCTTCCATCATTTTTCTCAGCAACCTCGCAAACAACAGACA TAGCAAGCTCAAAGGCAAACAATGCGGATTTTTTTCCCCCAATATCTTCC TAGAAGAAAAAATTGTGCTGCTAGTGTTGCATAGGCAGGTTGGCTGTGGT GTCGAGAATATATTTATATATATATATATGTGTGTGTGTTTATTAAATTG CACATAACCGCTACTAACGTAATCGGCCCTGTAATATGTAATATGTAATA TCCTCACTTTATTCTACTGTACTGCATGTAACCCGCCTGGGGGTTACTTT CCGTGAACATACATTTTGGTTGTAAATACGCGTGCATCCAGCCACATCTC CTCTCCAGACTTACACGACTATCGTGTATATCTGTGTGTATTTATGAAGT TGTACATAACCGCTACTAATGCAATCTGGCTCTGTCTCTGTCATGCTAAT CCTTCTATTAATAGGCAGGCTACTCTATTAATGGCATTGATCATTGATCC TCCCAATGAGGGATTCGATTCGATCATATTTGCTACAAAAACCTCGTGTG TGTATGTGTGTGTATTTATTAAATTGCACATCACCGCGCAATCCGGCTCT GTCATGCTAGTCCTTCTAGGCTACTCCCGCATTGATCCTTCCTGTGTGTG TGTGTGTGTGTGTGTGTATCTGTGTGTGTGTCTGTATTTCCCATGTCCGA GGATCGGCTGTACACTTGCCGTAAACGATGCCTACCTCAACGATCACCCT GCCTTTCTTCCTCTCGTACATTCGTTTTGTACGGTCGGTTGATGTCCGGT CCCCCGCGCGTACGACCTTGTCTGGTGGTGTTCGACGGGGGTAGGTATGA CGCCGTCTGCCTCTTTGTGAACGATGTCGCCGACGGCGAGGTGCTGAAGA CGCTCGGCGTGTTCGGCGTGGGCATGATAGCGTTGCGGTGAGCCACCACT GCTGCTGCAGGATAGAGCTGCAGTTATCTGGTGTAAGTATAACTCTCAAT AAAAAATATGGTACTATATTTTGTTTTATTTTGTATTTTTTCCTTAATAT ATTTATATATATATATGTATATATAATCCACCGATGGGAAGGCTCCGATG AATGACCGTACCCTGCGCAGCAACCACATATTTTCGTTTTGCCCGGGTGG TAAGCACACGACACCACGACAGGCCGCTGCCCCCCAAATCTTACTTCCTC TCTACTCACAGCGGCAGGCACGCGAGAGCGTAATCCTCTGGCACTAGTGG CGCGATGGTCGAGATAAAAAAAACACATACACACACAACGTCGCAGAGCA TGTCGGCGCTTCCCCACTTGTGATATATATTGACCAAATCATTCGTTTCC TTCTCCCCCTCCCCCCTGTGCGTGGATCAGTTGCGCCGGTTTCGACAAGG TAGATACGGACGCGGCTCAGGCTCTGGGCTTGACCGTGGCCCGAGTGCCG GCATACAGGTACGAAGAGCGAGCGCTAAACTAAATTGGTAAACGATGGGG CATGTGGACAATGACGTTCAATGCGTTCGAGTGATGCGACAAAGTGATCA AACTTGCATGACGCTGACGGGGCGCGCTAAGATATTCGCGTATATGTATT AAATTCCCGAAGTCAGTCCGCTTTGGCGGGCGTAATAGACGGGCGAAGTT GATGATCGAAAATGTGCGTGGCATGGATATCGCGTTACGTACACATACCC CATATCCCGATCGCGATTTCTCCCCCCCTTACCCAATTACGTGGTACTCA AAGCAGAGCGGTGATCGCCTTCTACCCCCCCTCCCCCCATGAAATTTCCC GACGGTTTCGACGTAGCCTACCGCTGACAACCCTTGTCCTTTGTGCTCAC AAACTTTACCCGAACCCGTTGCATGGACGCTGGGGGAAACGATGACACCG ATGACGTCATTGTCACAACCGCAAAAGCCCGTACGCGGTGGCGGAGCACG CGATCGCCCTTTTGATGGCGCTCAACCGCAAGGTGCACCGGGCGTCCGTC CGGACGAAAGACGCCAACTTCTCCATCGACGGTCTGGTGGGCTTCGACCT CCACGGCAAGACCGTCGCCGTTGTTGGCTGCGGACGGGTGAGGTCCCGGA ACGTCCCTATTCTCCGTCCTTCCGCCCTTTCCTCCAGGCACTCCTTACTT TTGGTACTGAGCGTTATGAGAAGGAACGTGCGTGCCACACACAAAGATAG ATAGATAGAGAGACAGCCAGTATACTGCGAAATAGCAGCAACGACTCCCC CCCCCCCCCATCTATATAGTTGTCGTTGTTGCGTTCCCTTTCCATGTCAA TCGACCCTTCATTGTCGGTTCGTCTCGTGAAATGCGCACCCGATCGATCG TGGTTGCGAAACCAACTCTCTTCCTCTCCCCAGATCGGTCAGTGCCTCTG CAACATTCTCCTTGGATTTGGCGTGAGGCTTCTGTGCGTCGAAGCGTTCG GGGAAGTCCCGGACCTGGTTCAACGGGGTGCCAAGTTCGTCGAGATGGAA GAGGCAAGGAAAGGGATCGCTCGAGTCTCAGGCTGGCTCGGCAGCGCTTG CCGCCTCCTAGATTTCTTCTTATGCTGCCCGAAGTCGTTCCGTGCTCGCG CCTCTTGTATCCAAGCTTCCCATCGTAGGAGCCTTAATTTTTGAAGCAAT GTGGAGGAGTCGTTTTGCTGCCACGCGAAAGTAGCAAATGTGAAGCGCGC GTTCATATTTTGACGTGCCTGGATCGGGCACACGAGAGGGGTGGCGTATT CGCCCCCACCCTTACCCTCGCCTGTCCTACACCCTGAGGCACTCGCTTTC CTGTGGAATTTGGTCGTTGCTTTGATGCGCAATCGGACGGATCCAGGCAT GGAAGGAGGCCGACGTGGTTTTCCTTCAAGTCCCGCTTTTGCCGTCGACG AAGCATATGTTCAACGAAGACGTTCTTCCTAAGCTGAAGAAGGGCATGAC CCTCATCAACACATCTCGGGGAGGTAACGTCGACGTTCGGCAACGGCGCA GATAAACTTGTGCGATCTTGCAGTGGGGGTGGTTGGACATAGTCTTGGTC TGTGGCACCCGTTGATGAATTGTTTTTATGAAAATATAGATGAACTCACT CAGATCCTTCGAACATCCACGCCTTCTTAGCGCCGTGAGAGGTGCAGTCC AGGGGACCAACTATCGTCAGGTTCGAATGTGGACATTTTTACTACATTTA AGCACAAAATCGTTTGCATCTTACACATTCAAAAAAAGTTAACAACCAAA CAAACCGAAGCATCTCCGTGATATGTTCTCTTTTGCGATTCGCATTGAAG TACAGTGATTATAGCTGGGGGTCGGGGTCGGGGCACAATTGGGATGATGA TTCATTACCACCTTGAAGTGAATTGTTTTTACCTTCTGCGTATAGCAGAA GTACACTTGGTTTGGTCGAGGTAAACTGTAGCTGCTGGAGAGGACGTGTG ATTCTGGTCGAGGCTATCGTCGTAGCAGGATTCGAATATGTAGTTATTCC GCACGGTTCCCTCCCCTCTCCTCGATGAAAACGTTTTGGTGCTGAACGCC GCATCGTGGATGGTACAACAGGCCTGGTGGACACCAAGGCACTCATCAAG GGGCTGAGGTCTGAGGTGATAGGCATGGCCGGGCTGGACGTGTACGAGCA CGAGGCTGGCTATTTTTTCCGCGACTGCAGCAACGCCCCCGTTCAGGCGA GGCCTCTTGTGTGTCTTAAATTATTGTTCGTTATCCCTCCCCCCGCCCTC CCTCTCCCCTTTAAGCGCCTTCGATCATGATTGAACCCAGCGAGGCGCTC AGGTTGAAAAATGAATGCGCCGAGCCTCACATGATGATTGAAGGATGCAT TTTCCTGTGTGTCATGTGGCGCTTTCCGCCAGCCCCTTGACGGACCGCAT TGTTTTTAATTCCGCGACCCCTCCCGTGTTTACGGTTTGTCGTTCCTCTT CTGCGGGTCTCTATATCCCTCTTTCTCGTTGCAGGACCACGTCCTCTCGG AACTGTTGAGCTTCAACAACGTCCTTCTCACCGGCCACCAGGTACACGTA CGAGTAGGAGCAGCATATTATATGGAATAGAAGTTGGAATATTTATGGCG TCCTTGCGAAGGAAATAAAATCGCTGGAAATACGGACCATTAGTCGAAGA CGATTCTCACAGCCGACAGAATCGTGGCAACCCCTCTTCTTCACCTTCAA GAAAGCTTGTCCCTCCCTCAAGCTGTGGCACCATCCGGGTGTTTGATCCC CTTACTATTCCCCTCTCAATGTATACCCCCCCCGTCTGCGTCGTCGCGTG TCGTTTGCAGGCATTTTTCACTCAGGAGGCAATCAACGCTATAGTGGACA CAACGTTCGGTGAGATAATCTTGACTGAAACTTCTGCCTGGCGGGGCTAA TTTAAATTGTCATTTTTTCACGCGAGACCTTGACTCTCCCCCGTTTTATT ATTTTTTAGTGAGATTTTTCGTAATCGATCCAATGCTACATACATTGTTC CTGCGAGTTAAGTTAAAAACAATCTCCCATTGGCGAGGAAATTCTGTCTG CGCAAGGGGACGCTTGTAGCGTGCACCCTCGATCGTTTGGCAAAGGCTTC GTGCTTTGCTATTGTTCCTGAACCCCACGAATTTTCCCCGTGCCCCCTGC TTCCGTCGAACTCCTGGTGCTCCCCGCTCTGCGTTGACAGCCAATATAGC CGAATGGCGCGATGGCGCTAAGGGCAAGGCCCACAAGAACTCGGCGTACT GA
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Coding sequence (CDS) from alignment at H-elongata_contig6656:1009..8460+

>mRNA_H-elongata_contig6656.14260.1 ID=mRNA_H-elongata_contig6656.14260.1|Name=mRNA_H-elongata_contig6656.14260.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig6656:1009..8460+ (Himanthalia elongata Himel1 dioecious)
TCGCAGGTAATTACAGGACTATCCGATGAGACTCTCGACAGCGTCGCCAA
AAGTCGCAGGTAATTACAGGACTATCCGATGAGACTCTCGACAGCGTCGC
CAAAAGGATGACCGAGCGGCACCTCAAGGACGGCGAAATCCTGGTCAAAG
AGGGCCAGCCGATGCCAGCCTTGTTCCTGATGACCGAGCGGCACCTCAAG
GACGGCGAAATCCTGGTCAAAGAGGGCCAGCCGATGCCAGCCTTGTTCCT
AATCGAGTCCGGAGTGCTTGATCGCGTGAGGCACCCGGTGGGAGACAGTG
ATAAGCAAGCGGAGTTCTTGGTCGATTGCAAAGAGGCGGGGGCCGCCACG
GGACTTCTTCACGTCCTCAAGTTTGGAGAGGCCTATCCCGCGTTCGTCAC
CGTCAGGGCACGCGGCGAAGCAAAGAATCGAGTCCGGAGTGCTTGATCGC
GTGAGGCACCCGGTGGGAGACAGTGATAAGCAAGCGGAGTTCTTGGTCGA
TTGCAAAGAGGCGGGGGCCGCCACGGGACTTCTTCACGTCCTCAAGTTTG
GAGAGGCCTATCCCGCGTTCGTCACCGTCAGGGCACGCGGCGAAGCAAAG
GTATGGAGCTTGGAAGCGAGTGATCTGGAGTCAATGCTCAAGGGTAACCC
GGAGTTGGCCATGAGTGTGATCTCGTCGCTCGCGGCGGACCTTCGGGGGA
AATCGAAGGCGAGCAGCGGTTGTGTATGGAGCTTGGAAGCGAGTGATCTG
GAGTCAATGCTCAAGGGTAACCCGGAGTTGGCCATGAGTGTGATCTCGTC
GCTCGCGGCGGACCTTCGGGGGAAATCGAAGGCGAGCAGCGGTTGTGCAT
TGTCCCACCTGATCAGTGCTCCGGGGAAGATCGGTGGGGAGAAATTCGAG
GGTACCAAGGTCATCTGTTACGGCTCGACAGGGTGGGTGAGGGAGAACTT
CCAGGCCAAGGCCGACAAGCACAATGAGGCATTGTCCCACCTGATCAGTG
CTCCGGGGAAGATCGGTGGGGAGAAATTCGAGGGTACCAAGGTCATCTGT
TACGGCTCGACAGGGTGGGTGAGGGAGAACTTCCAGGCCAAGGCCGACAA
GCACAATGAGACCTCGAGTCCAAGGGAACAAATCATGGTGGACTTCACTT
CTGACACTCTCAGCGCCTCGTCCGTGGCTTCTGCGGTCGGACCTCGAGTC
CAAGGGAACAAATCATGGTGGACTTCACTTCTGACACTCTCAGCGCCTCG
TCCGTGGCTTCTGCGGTCGGGTATGACGCCGTCTGCCTCTTTGTGAACGA
TGTCGCCGACGGCGAGGTGCTGAAGACGCTCGGCGTGTTCGGCGTGGGCA
TGATAGCGTTGCGGTATGACGCCGTCTGCCTCTTTGTGAACGATGTCGCC
GACGGCGAGGTGCTGAAGACGCTCGGCGTGTTCGGCGTGGGCATGATAGC
GTTGCGTTGCGCCGGTTTCGACAAGGTAGATACGGACGCGGCTCAGGCTC
TGGGCTTGACCGTGGCCCGAGTGCCGGCATACAGTTGCGCCGGTTTCGAC
AAGGTAGATACGGACGCGGCTCAGGCTCTGGGCTTGACCGTGGCCCGAGT
GCCGGCATACAGCCCGTACGCGGTGGCGGAGCACGCGATCGCCCTTTTGA
TGGCGCTCAACCGCAAGGTGCACCGGGCGTCCGTCCGGACGAAAGACGCC
AACTTCTCCATCGACGGTCTGGTGGGCTTCGACCTCCACGGCAAGACCGT
CGCCGTTGTTGGCTGCGGACGGCCCGTACGCGGTGGCGGAGCACGCGATC
GCCCTTTTGATGGCGCTCAACCGCAAGGTGCACCGGGCGTCCGTCCGGAC
GAAAGACGCCAACTTCTCCATCGACGGTCTGGTGGGCTTCGACCTCCACG
GCAAGACCGTCGCCGTTGTTGGCTGCGGACGGATCGGTCAGTGCCTCTGC
AACATTCTCCTTGGATTTGGCGTGAGGCTTCTGTGCGTCGAAGCGTTCGG
GGAAGTCCCGGACCTGGTTCAACGGGGTGCCAAGTTCGTCGAGATGGAAG
AGGCAAGGAAAGGGATCGCTCGAATCGGTCAGTGCCTCTGCAACATTCTC
CTTGGATTTGGCGTGAGGCTTCTGTGCGTCGAAGCGTTCGGGGAAGTCCC
GGACCTGGTTCAACGGGGTGCCAAGTTCGTCGAGATGGAAGAGGCAAGGA
AAGGGATCGCTCGAGCATGGAAGGAGGCCGACGTGGTTTTCCTTCAAGTC
CCGCTTTTGCCGTCGACGAAGCATATGTTCAACGAAGACGTTCTTCCTAA
GCTGAAGAAGGGCATGACCCTCATCAACACATCTCGGGGAGGCATGGAAG
GAGGCCGACGTGGTTTTCCTTCAAGTCCCGCTTTTGCCGTCGACGAAGCA
TATGTTCAACGAAGACGTTCTTCCTAAGCTGAAGAAGGGCATGACCCTCA
TCAACACATCTCGGGGAGGCCTGGTGGACACCAAGGCACTCATCAAGGGG
CTGAGGTCTGAGGTGATAGGCATGGCCGGGCTGGACGTGTACGAGCACGA
GGCTGGCTATTTTTTCCGCGACTGCAGCAACGCCCCCGTTCAGGCGAGGC
CTCTTGCCTGGTGGACACCAAGGCACTCATCAAGGGGCTGAGGTCTGAGG
TGATAGGCATGGCCGGGCTGGACGTGTACGAGCACGAGGCTGGCTATTTT
TTCCGCGACTGCAGCAACGCCCCCGTTCAGGCGAGGCCTCTTGACCACGT
CCTCTCGGAACTGTTGAGCTTCAACAACGTCCTTCTCACCGGCCACCAGG
ACCACGTCCTCTCGGAACTGTTGAGCTTCAACAACGTCCTTCTCACCGGC
CACCAGGCATTTTTCACTCAGGAGGCAATCAACGCTATAGTGGACACAAC
GTTCGGCATTTTTCACTCAGGAGGCAATCAACGCTATAGTGGACACAACG
TTCGCCAATATAGCCGAATGGCGCGATGGCGCTAAGGGCAAGGCCCACAA
GAACTCGGCGTACTGACCAATATAGCCGAATGGCGCGATGGCGCTAAGGG
CAAGGCCCACAAGAACTCGGCGTACTGA
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