prot_H-elongata_contig66559.14259.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66559.14259.1
Unique Nameprot_H-elongata_contig66559.14259.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Match: D8LGH6_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGH6_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.480e-63
Identity = 101/114 (88.60%), Postives = 108/114 (94.74%), Query Frame = 0
Query:    1 MTAALAWRAIPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSVGQDNVFAPRSNVLLLGAELSDLGLAVG 114
            MTAALAWRAIP+TIFCAGYGNVAMEVLRRGSP+ITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATL++FLR V Q+N F+ RSNVLLLGAELSD+GL  G
Sbjct:  279 MTAALAWRAIPLTIFCAGYGNVAMEVLRRGSPKITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLLEFLRGVRQENAFSARSNVLLLGAELSDIGLGNG 392          
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Match: A0A836CLU8_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 7.050e-36
Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 0
Query:    4 ALAWRAIPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSVGQDNV-FAPRSNVLLLGAELSDLGLAVG 114
            ALA+R IP+ + C GYGNVA+EVLRRG+P I GP G  +PHL ++ANFF+ D+TM+I+ +YD VPL+HE  K+G  ++DF R+V  D +  A RSN +++GAEL+DL L  G
Sbjct:  170 ALAYRGIPINVVCTGYGNVAIEVLRRGAPSIAGPNGALSPHLHMIANFFQSDETMSIVDLYDKVPLVHEGNKNGNMILDFHRAVRWDTMALAARSNAVVVGAELADLNLTAG 281          
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Match: W7TT02_9STRA (5'-nucleotidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT02_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.740e-12
Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    5 LAWRAIPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSV--------GQDNVFAPRSNVLLLGAELSDLGLAVG 114
            LA+R +P+TIFC GYG+V   +L   +P +   GG   P+LRLV+NFFR        G   + P++H    +  T   F   +        G   + +P SNV LLG  L DL +A G
Sbjct:  302 LAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGF--SGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSP-SNVFLLGGSLGDLKMASG 416          
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Match: A0A4D9DCT9_9STRA (5'-nucleotidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCT9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.060e-12
Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    5 LAWRAIPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSV--------GQDNVFAPRSNVLLLGAELSDLGLAVG 114
            LA+R +P+TIFC GYG+V   +L   +P +   GG   P+LRLV+NFFR        G   + P++H    +  T   F   +        G   + +P SNV LLG  L DL +A G
Sbjct:  420 LAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGF--SGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSP-SNVFLLGGSLGDLKMASG 534          
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Match: H2ZRP4_LATCH (5'-nucleotidase n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZRP4_LATCH)

HSP 1 Score: 51.6 bits (122), Expect = 2.620e-5
Identity = 34/105 (32.38%), Postives = 54/105 (51.43%), Query Frame = 0
Query:   10 IPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSVGQDNVFAPRSNVLLLGAELSDLGLAVG 114
            IP+ IF AG G+V  E++R+         GVF P++++ +N+   D+   + G      LIH   K+   L    R++        R+NV+LLG  + DLG+A G
Sbjct:  113 IPLFIFSAGIGDVLEEIIRQA--------GVFHPNIKVFSNYMDFDENGVLRGFKGE--LIHTYNKNDGAL----RNIEYFQQLKGRTNVILLGDSMGDLGMANG 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66559.14259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LGH6_ECTSI1.480e-6388.605'-nucleotidase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A836CLU8_9STRA7.050e-3654.465'-nucleotidase n=1 Tax=Tribonema minus TaxID=3033... [more]
W7TT02_9STRA7.740e-1236.445'-nucleotidase n=1 Tax=Nannochloropsis gaditana T... [more]
A0A4D9DCT9_9STRA8.060e-1236.445'-nucleotidase n=1 Tax=Nannochloropsis salina CCM... [more]
H2ZRP4_LATCH2.620e-532.385'-nucleotidase n=2 Tax=Latimeria chalumnae TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006434Pyrimidine 5'-nucleotidase, eukaryoticPFAMPF05822UMPH-1coord: 3..114
e-value: 4.3E-8
score: 33.0
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 1..117
e-value: 3.2E-17
score: 64.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66559contigH-elongata_contig66559:8..2320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66559.14259.1mRNA_H-elongata_contig66559.14259.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66559 8..2338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66559.14259.1 ID=prot_H-elongata_contig66559.14259.1|Name=mRNA_H-elongata_contig66559.14259.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MTAALAWRAIPMTIFCAGYGNVAMEVLRRGSPRITGPGGVFTPHLRLVAN
FFRPDDTMTIIGMYDTVPLIHEAKKSGATLMDFLRSVGQDNVFAPRSNVL
LLGAELSDLGLAVGEFKGLYCM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006434Pyrimidine_nucleotidase_eu
IPR023214HAD_sf