prot_H-elongata_contig66298.14229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66298.14229.1
Unique Nameprot_H-elongata_contig66298.14229.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
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BLAST of mRNA_H-elongata_contig66298.14229.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 3.340e-22
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:    3 SGGVEEAERCEGCGRTFAPGRLHSHAKACRSVFLERRPQYDPRAMRAKGTPLEFFQRHIVTA 64
            +GG EE ERC  CGRTFAPGRL SHAKACRSVFLERR  YDP+AMRA+GTPLEFFQ+ I  A
Sbjct: 1058 AGGAEE-ERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAA 1118
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BLAST of mRNA_H-elongata_contig66298.14229.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 5.880e-22
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0 
Query:    5 GVEEAERCEGCGRTFAPGRLHSHAKACRSVFLERRPQYDPRAMRAKGTPLEFFQRHIVTA 64
            G  + ERCE CGRTFAPGRL SHAKACRSVFLERR  YDP+AMRA+GTPLEFFQ+ I  A
Sbjct:  261 GGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAA 320
[Close]
BLAST of mRNA_H-elongata_contig66298.14229.1 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.230e-11
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0 
Query:   10 ERCEGCGRTFAPGRLHSHAKACRSVFLERRPQYDPRAMRAKGTPLEFFQRHIVTAPPAVKKTHRHSSAPV 79
            E+C  CGRTFA GR+ +HA+ CR VF  RRP +D R  R +GTPL F QR   T         R ++AP+
Sbjct:  786 EQCADCGRTFAEGRIDAHARVCRRVFGARRPVFDGRERRLRGTPLAFMQRAEATGGVGGSGGKRAATAPL 855
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66298.14229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFQ9_ECTSI3.340e-2277.42WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR3_9PHAE5.880e-2276.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7V0_9STRA2.230e-1147.14WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 11..32
e-value: 3.0E-6
score: 27.0
NoneNo IPR availableGENE3D3.30.160.60coord: 11..35
e-value: 1.1E-5
score: 27.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66298contigH-elongata_contig66298:1583..2531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66298.14229.1mRNA_H-elongata_contig66298.14229.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66298 1583..2532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66298.14229.1 ID=prot_H-elongata_contig66298.14229.1|Name=mRNA_H-elongata_contig66298.14229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
EISGGVEEAERCEGCGRTFAPGRLHSHAKACRSVFLERRPQYDPRAMRAK
GTPLEFFQRHIVTAPPAVKKTHRHSSAPVARD
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