mRNA_H-elongata_contig65832.14169.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig65832.14169.1
Unique NamemRNA_H-elongata_contig65832.14169.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 5.700e-144
Identity = 218/353 (61.76%), Postives = 259/353 (73.37%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVYA---------------KGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            M +EV +APLPILH+ +D WT K SGRKFLG HV YV++  ELK+ALLS+K YAP Q +L  ++ + VL +I +S L+EFGL P +LASGTTDS SD+KA+S N L   Y VLW WC CHL VKAAEQA+G+ +DPAKS+NP ARD+LK V+KVVE LNKSPN KAKF+DLQ DML E+FK++KHAPQRWLSL RT+ER IRLWHVLRKLY DE + FPL EG  K+ ILQLYSLL+P+  ITRDG +G APM ADI MKFG L  DVLD  K+LKV+                K  LPFKMV P  LH    +TR E+ +A VSR YGRVWD +T DP FF  A+ LLTPPF
Sbjct:  245 MVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPF 597          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 1.810e-129
Identity = 203/353 (57.51%), Postives = 247/353 (69.97%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            M EEV  APLPILH+ +D W  K SGRKFLG HV YV +  ELK  LLS+K Y PSQ+AL + K A+VLL+I E+ L EFG  P +LASGTTDS SD+K++SVNGL  +YGVLW+WC CHL +KAAE AFG   DP KS+NP+A ++LK +I +V  L+KS NL AKF+DLQ D+L E+ KI   APQRWL+LVRT+ER+IRLWHVLRKLY D  K F L EG NK+ I QLYSLL+ +  +TRDG +G  PM ADI++KFG LKM VL+   +LKV+                K  L  KMV   +LHPVA + R +L +A VSR YG VWD S  DPS F DA+ LLTPPF
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPF 353          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 1.990e-127
Identity = 202/353 (57.22%), Postives = 245/353 (69.41%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            M EEV  APLPILH+ +D W  K SGRKFLG HV YV +  ELK  LLS        +AL + K A+VLL+I E+ L+EFGL P +LASGTTDS SD+K++SVNGL  +YGVLW+WC CHL VKAAE AFG   DP  S+NP+AR++LK +I ++  L+KS NL AKF+DLQ D+L E+  I   APQRWL+LVRT+ER+IRLW V+RKLY D  K FPL EG NK+ I QLYSLL+P+  +TRDG +G  PM ADI+MKFG LKM VL+   +LKV+                K  LP KMV   +LHPVA + R EL +A VSR YGRVWD S  DPS F DA+ LLTPPF
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPF 344          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 2.000e-122
Identity = 187/304 (61.51%), Postives = 226/304 (74.34%), Query Frame = 1
Query:  148 VKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            +K Y+PSQ+AL +   ++VLL+IF+S L EFGL P +LASGTTDS SD+K+ SVNGL  QYGVLW+WC CHL VKAAE  FG  VDP KS+NP+ARD+LK VI +V  LN+S N KAKF+DLQ D+L ++ KI   APQRWL+ VRTLER+IRLWHVLRKLY D  K FPL EG NK  ILQL+SLL+ +  +TRDG +G+APM AD+ MKFG+LKM+VLD  K LKV+                K  LP KMV+P DLHPVA + R++L +A VSRLYGRVWD +T DPSFF DAS LLTPPF
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPLGQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPF 313          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 6.750e-121
Identity = 189/362 (52.21%), Postives = 243/362 (67.13%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY------------------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            M  E+ +APLPI+HY +D W CK++G K++  HV YVNS LEL++ LL+VKHYAPS       K +++L  +F S L EFG+   +LA GTTDS SD+KA+ VN LLAQ+   WDWC CHLA +AAEQAFG S DP K +N DAR +++LVIK   K+N+SP  K KFD+ Q  M  E+ KI KHAPQRWLSLVR +ERIIRLWHVLRK+Y ++   FPL +G NK+ ILQLYSLL+P+  ITRDG +G+ PM+A++HM F +LK + LD    LKV+                         K  LP K V+P  L PVA++TR  L KA V +LY R+WD  + DPS FR+AS+LLTP +
Sbjct:  228 MLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSY 589          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 6.810e-108
Identity = 157/266 (59.02%), Postives = 206/266 (77.44%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKM 798
            MQEE+NKAPLPI+HY +D WTCKVSGRK+LG HV YV+S   L++AL+SVKHYAPS E    EK +++L  IF +TL E+G+   +LA GTTDS SD+KA+ VN LL  + + WDWC CHLA K+AE  FG S DP +S+N  ARD++KLVIK   K+N+S  +K KF+ +  +ML+E+ KI KHAPQRWLSLV  +ERIIRLWHVLRK+Y ++ + FPL +G+N++ ILQLYSLL+P+  ITRDG +G+APMTA++H+ F +LKM
Sbjct:  209 MQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLKM 474          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 1.390e-103
Identity = 163/265 (61.51%), Postives = 193/265 (72.83%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLK 795
            M  EV  APLPILH+ +D WT K SGRKFLG H+ YV +  ELK AL+S K              A+VLLKI ES L EFGL   +LASGTTDS SD+K++SVNGL  +YGVLW+WC CHL VKAAE AFG   DP KS+NP+ R +LK VI +V  L+KSPNL AKF+D+Q D+L E+ KI   APQRWL+LVRTLER+IRLWHVLRKL+ D  K FPL EG NK+ ILQLYSLL+P+  +TRDG +G  PM ADI+MKFG LK
Sbjct:  171 MLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGMLK 422          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.150e-96
Identity = 169/322 (52.48%), Postives = 202/322 (62.73%), Query Frame = 1
Query:    1 MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKA 921
            M EEV  APLPILH+ +D WT K SGRK                               L +     VLL+I ++ L EFGL   +LASGT DS SD+K++S NGL  Q+GVLW+WC CHL VKAAE  FG  VDP KS+NP+ARD+LK +I +V  L++S N KAKFDDLQ D+L E+ KI   AP+RWL+LVRTLER+IRLWHVLRKLY D  K FPL EG NK+ ILQLYSLL+P   +TRDG +G APM ADI+MK G LKM VLD  +ELKV+                K  LP K+V   DL PVA + RA  S A
Sbjct:   42 MLEEVKNAPLPILHHMIDIWTDKGSGRK------------------------------TLWERPRPGVLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLPDREEQKKALPHKVVAHDDLRPVAQK-RATNSAA 332          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.420e-93
Identity = 166/322 (51.55%), Postives = 205/322 (63.66%), Query Frame = 1
Query:   94 FHVHYVNSELELKNALLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            +H+H+         A   +K Y PSQ+A+ + K ++VLL+I  + L EFGL P +LASGTTDS  D+K++SVNGL  Q+GVLW+ C  HL VKAAE  FG  VDP KS+NP ARD+LK +I +V  L++S N KAKF DLQ D+  E+F     APQRWL+LV TLER+IRLWHVLRKLY D  K FPL EG   + ILQL SLL+P+  +TRDG +G APM          LKM VLD  +ELKV+                K  LP  MV    L PVA + R EL +A  +R YGRVWD+ST DPS   DA+ LLTPPF
Sbjct:    6 YHLHFCF------RAFAQIKRYQPSQDAVGEAKASEVLLEIVNAILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELKVFDIPPLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPPF 309          
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.620e-91
Identity = 161/307 (52.44%), Postives = 194/307 (63.19%), Query Frame = 1
Query:  139 LLSVKHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKALSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKLVIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERIIRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGSAPMTADIHMKFGKLKMDVLDIQKELKVY---------------AKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF 1014
            L   K Y+P Q AL + K ++VLL IF+S L EFGL P  LASGTTDS SD+KA+S+NGL   +GVLW+WC CHL +KAAEQ F  S+D  KS+NP ARDLLK VIKVVE LNKS NL AKF+DLQ D+L E+FK++KHAPQRWL L RTLERIIRLWH                                P+  ITRD  +G APMTA+I MKF  LK +VLD+ + L+V+                K  LP KMV    LHP  +  R EL +A +SRLY RVW+  +P+PSFF DA+ LLTPPF
Sbjct:    2 LFKSKRYSPDQGALGQAKASEVLLVIFKSILHEFGLNPSYLASGTTDSGSDVKAVSINGLWKHFGVLWNWCFCHL-MKAAEQPFCTSLDTVKSKNPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLRVFDIPALGEDGLPNRGEQKKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPPF 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65832.14169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ9_9PHAE5.700e-14461.76Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JB08_9PHAE1.810e-12957.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ66_9PHAE1.990e-12757.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE2.000e-12261.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1G0_9PHAE6.750e-12152.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ2_9PHAE6.810e-10859.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS21_9PHAE1.390e-10361.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L8D8_9PHAE1.150e-9652.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT2_9PHAE1.420e-9351.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8W6_9PHAE1.620e-9152.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65832contigH-elongata_contig65832:1612..2935 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score128.3
Seed ortholog evalue7e-27
Seed eggNOG ortholog2880.D7G3L2
EggNOG OGs2CZK4@1,2SARG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1014
Cds size1014
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65832.14169.1prot_H-elongata_contig65832.14169.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig65832 1612..2935 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931045.7771938-CDS-H-elongata_contig65832:1611..17581622931045.7771938-CDS-H-elongata_contig65832:1611..1758Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 1612..1758 +
1691679675.5807247-CDS-H-elongata_contig65832:1611..17581691679675.5807247-CDS-H-elongata_contig65832:1611..1758Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 1612..1758 +
1622931045.7941794-CDS-H-elongata_contig65832:2023..27111622931045.7941794-CDS-H-elongata_contig65832:2023..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 2024..2711 +
1691679675.5930533-CDS-H-elongata_contig65832:2023..27111691679675.5930533-CDS-H-elongata_contig65832:2023..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 2024..2711 +
1622931045.8167841-CDS-H-elongata_contig65832:2756..29351622931045.8167841-CDS-H-elongata_contig65832:2756..2935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 2757..2935 +
1691679675.6039772-CDS-H-elongata_contig65832:2756..29351691679675.6039772-CDS-H-elongata_contig65832:2756..2935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65832 2757..2935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig65832.14169.1

>prot_H-elongata_contig65832.14169.1 ID=prot_H-elongata_contig65832.14169.1|Name=mRNA_H-elongata_contig65832.14169.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=338bp
MQEEVNKAPLPILHYEVDAWTCKVSGRKFLGFHVHYVNSELELKNALLSV
KHYAPSQEALQKEKTAKVLLKIFESTLDEFGLTPYNLASGTTDSDSDIKA
LSVNGLLAQYGVLWDWCPCHLAVKAAEQAFGVSVDPAKSQNPDARDLLKL
VIKVVEKLNKSPNLKAKFDDLQADMLNELFKIIKHAPQRWLSLVRTLERI
IRLWHVLRKLYLDEEKPFPLGEGSNKEGILQLYSLLKPVCEITRDGPFGS
APMTADIHMKFGKLKMDVLDIQKELKVYAKGDLPFKMVKPGDLHPVASRT
RAELSKAFVSRLYGRVWDSSTPDPSFFRDASILLTPPF
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mRNA from alignment at H-elongata_contig65832:1612..2935+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig65832.14169.1 ID=mRNA_H-elongata_contig65832.14169.1|Name=mRNA_H-elongata_contig65832.14169.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1324bp|location=Sequence derived from alignment at H-elongata_contig65832:1612..2935+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGAGGAAGTCAACAAAGCACCGCTCCCCATCTTGCACTACGAGGT TGACGCGTGGACGTGCAAGGTGTCGGGGCGCAAATTCCTTGGTTTTCACG TCCACTACGTCAATTCAGAGTTGGAACTGAAGAACGCTCTGCTCTCTGTG AGTGAAAGGCTGCCATCGACCCATTTGGTATACACGTGTTGAGTGGATGA CAAGTGTAGGGTAGACATCGTGTGGATTTTCATAGTTGTGACAACGAATT TCGTCGTGCAGTGTTCTCCCGATTAGTACGGTACGACTCATGTTTATTTT CCTTTCATACAGGATTATGCCTATAGCCGAAAACATGGTGTTGGTACCTT TTTTCCGCCGCTTGTATTGTATCCTCCCCTTCTTTTGGTGGCTTCGATTT TGGATACCCAAGGTCAAGCACTACGCCCCCTCGCAGGAGGCTCTGCAAAA AGAGAAGACCGCCAAAGTGCTTCTCAAGATTTTCGAGTCTACGTTGGACG AGTTCGGATTGACCCCCTACAACCTCGCGTCGGGTACCACAGACAGCGAC TCCGACATCAAGGCGTTGAGCGTCAACGGCCTTCTGGCGCAGTATGGGGT CCTGTGGGATTGGTGCCCCTGCCACTTGGCGGTCAAGGCCGCCGAGCAAG CCTTTGGTGTGTCCGTCGACCCGGCGAAATCCCAAAACCCCGACGCGCGC GATCTTCTCAAGCTCGTTATCAAGGTCGTTGAAAAGCTCAACAAGTCTCC CAACCTCAAGGCCAAATTCGATGACCTCCAGGCTGACATGCTGAACGAAC TCTTCAAGATCATCAAGCACGCGCCCCAACGGTGGTTGAGCTTGGTCCGC ACGCTGGAGCGGATCATCCGCTTGTGGCACGTGCTGAGGAAGCTTTACTT GGATGAGGAGAAGCCATTTCCCCTCGGCGAAGGCAGCAACAAGGAAGGCA TCCTGCAGCTCTACTCGCTGCTGAAACCTGTGTGCGAGATCACCCGTGAC GGCCCGTTCGGCAGTGCGCCAATGACGGCGGACATCCACATGAAGTTTGG CAAGCTTAAGATGGACGTGCTGGACATCCAGAAGGAGCTCAAGGTGTACG GTATCCCCGCCCTTGGAGACAACGGCCTTCCCGACACCGGGGCAGCGAAA GGGGACCTACCCTTCAAGATGGTGAAACCAGGCGACCTGCATCCCGTGGC CTCTCGGACGCGGGCCGAGCTCTCCAAGGCTTTCGTCTCGAGGTTGTACG GGCGCGTGTGGGACTCGTCCACGCCGGACCCCTCTTTCTTCCGCGACGCC TCTATCCTGCTCACGCCACCGTTC
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Coding sequence (CDS) from alignment at H-elongata_contig65832:1612..2935+

>mRNA_H-elongata_contig65832.14169.1 ID=mRNA_H-elongata_contig65832.14169.1|Name=mRNA_H-elongata_contig65832.14169.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2028bp|location=Sequence derived from alignment at H-elongata_contig65832:1612..2935+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGAGGAAGTCAACAAAGCACCGCTCCCCATCTTGCACTACGAGGT
TGACGCGTGGACGTGCAAGGTGTCGGGGCGCAAATTCCTTGGTTTTCACG
TCCACTACGTCAATTCAGAGTTGGAACTGAAGAACGCTCTGCTCTCTATG
CAGGAGGAAGTCAACAAAGCACCGCTCCCCATCTTGCACTACGAGGTTGA
CGCGTGGACGTGCAAGGTGTCGGGGCGCAAATTCCTTGGTTTTCACGTCC
ACTACGTCAATTCAGAGTTGGAACTGAAGAACGCTCTGCTCTCTGTCAAG
CACTACGCCCCCTCGCAGGAGGCTCTGCAAAAAGAGAAGACCGCCAAAGT
GCTTCTCAAGATTTTCGAGTCTACGTTGGACGAGTTCGGATTGACCCCCT
ACAACCTCGCGTCGGGTACCACAGACAGCGACTCCGACATCAAGGCGTTG
AGCGTCAACGGCCTTCTGGCGCAGTATGGGGTCCTGTGGGATTGGTGCCC
CTGCCACTTGGCGGTCAAGGCCGCCGAGCAAGCCTTTGGTGTGTCCGTCG
ACCCGGCGAAATCCCAAAACCCCGACGCGCGCGATCTTCTCAAGCTCGTT
ATCAAGGTCGTTGAAAAGCTCAACAAGTCTCCCAACCTCAAGGCCAAATT
CGATGACCTCCAGGCTGACATGCTGAACGAACTCTTCAAGATCATCAAGC
ACGCGCCCCAACGGTGGTTGAGCTTGGTCCGCACGCTGGAGCGGATCATC
CGCTTGTGGCACGTGCTGAGGAAGCTTTACTTGGATGAGGAGAAGCCATT
TCCCCTCGGCGAAGGCAGCAACAAGGAAGGCATCCTGCAGCTCTACTCGC
TGCTGAAACCTGTGTGCGAGATCACCCGTGACGGCCCGTTCGGCAGTGCG
CCAATGACGGCGGACATCCACATGAAGTTTGGCAAGCTTAAGATGGACGT
GCTGGACATCCAGAAGGAGCTCAAGGTGTACGGTCAAGCACTACGCCCCC
TCGCAGGAGGCTCTGCAAAAAGAGAAGACCGCCAAAGTGCTTCTCAAGAT
TTTCGAGTCTACGTTGGACGAGTTCGGATTGACCCCCTACAACCTCGCGT
CGGGTACCACAGACAGCGACTCCGACATCAAGGCGTTGAGCGTCAACGGC
CTTCTGGCGCAGTATGGGGTCCTGTGGGATTGGTGCCCCTGCCACTTGGC
GGTCAAGGCCGCCGAGCAAGCCTTTGGTGTGTCCGTCGACCCGGCGAAAT
CCCAAAACCCCGACGCGCGCGATCTTCTCAAGCTCGTTATCAAGGTCGTT
GAAAAGCTCAACAAGTCTCCCAACCTCAAGGCCAAATTCGATGACCTCCA
GGCTGACATGCTGAACGAACTCTTCAAGATCATCAAGCACGCGCCCCAAC
GGTGGTTGAGCTTGGTCCGCACGCTGGAGCGGATCATCCGCTTGTGGCAC
GTGCTGAGGAAGCTTTACTTGGATGAGGAGAAGCCATTTCCCCTCGGCGA
AGGCAGCAACAAGGAAGGCATCCTGCAGCTCTACTCGCTGCTGAAACCTG
TGTGCGAGATCACCCGTGACGGCCCGTTCGGCAGTGCGCCAATGACGGCG
GACATCCACATGAAGTTTGGCAAGCTTAAGATGGACGTGCTGGACATCCA
GAAGGAGCTCAAGGTGTACGCGAAAGGGGACCTACCCTTCAAGATGGTGA
AACCAGGCGACCTGCATCCCGTGGCCTCTCGGACGCGGGCCGAGCTCTCC
AAGGCTTTCGTCTCGAGGTTGTACGGGCGCGTGTGGGACTCGTCCACGCC
GGACCCCTCTTTCTTCCGCGACGCCTCTATCCTGCTCACGCCACCGTTCC
GAAAGGGGACCTACCCTTCAAGATGGTGAAACCAGGCGACCTGCATCCCG
TGGCCTCTCGGACGCGGGCCGAGCTCTCCAAGGCTTTCGTCTCGAGGTTG
TACGGGCGCGTGTGGGACTCGTCCACGCCGGACCCCTCTTTCTTCCGCGA
CGCCTCTATCCTGCTCACGCCACCGTTC
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