prot_H-elongata_contig65802.14166.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65802.14166.1
Unique Nameprot_H-elongata_contig65802.14166.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: D8LKP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP1_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 2.420e-38
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    2 QEGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            +EGELNPALRFANVTFWWS +CG+QWL+   + E YILEQP LRF+DLATMAKVSVL+LDEKYHGWYLHCRSPY +A   +
Sbjct:  290 EEGELNPALRFANVTFWWSLICGLQWLVACLITERYILEQPELRFVDLATMAKVSVLVLDEKYHGWYLHCRSPYPRADVAM 370          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A835Z317_9STRA (Transmembrane protein 67-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z317_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.560e-21
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    6 LNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            LN ALRFAN TF+W      QWL  W + E Y+ E P    +DLAT+AKVS+L+LDE +HGWY+HCRSPY +A   +
Sbjct:  273 LNAALRFANTTFFWLAFGAAQWLWRWAVGERYLGEPPEQLLVDLATLAKVSILVLDEPFHGWYVHCRSPYPRADVPM 349          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A1W0A6X7_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6X7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.680e-21
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    3 EGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            +G  N  LRFANV FWW  +   QWL  W + E +I E   L+FID+ T+AKVS ++LDE+YHG+YLHCRSPY+ A   +
Sbjct:  665 KGSANEYLRFANVFFWWLVLTLSQWLWRWLIYERWITEPKHLKFIDVCTLAKVSCILLDEEYHGYYLHCRSPYAFADGTM 744          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A1V9ZL78_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL78_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.060e-20
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    4 GELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            G  N  LRFANV FWW  +   QWL  W + E ++ E   L+FIDL T+AKVS ++LDE YHG+YLHCRSPY+ A   +
Sbjct:  708 GPPNEYLRFANVAFWWLVLVVSQWLWRWLIYERWVSEPRHLKFIDLCTLAKVSCVLLDEAYHGYYLHCRSPYAFADTSM 786          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A0P1AW11_PLAHL (Meckelin isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW11_PLAHL)

HSP 1 Score: 93.6 bits (231), Expect = 1.980e-20
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    1 AQEGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGLG 83
            A E  LNP LRFANVT WW  +   Q L  W + E YI E     FIDL T++K+S++ LDE YHG+YLHCRSP++ A   +G
Sbjct:  762 AAEEHLNPYLRFANVTIWWLLISMCQRLWKWMIFERYIEEPREQLFIDLCTISKISLIFLDETYHGFYLHCRSPHAFADGSMG 844          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A812RAQ2_9DINO (Tmem67 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RAQ2_9DINO)

HSP 1 Score: 92.0 bits (227), Expect = 6.870e-20
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    6 LNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            +NPAL+FAN  FWW  +   Q+++ WG+LE ++ E P LR++DL T+AK+S++ L  KY G+YLHC +PY  A   +
Sbjct:  644 INPALQFANNAFWWYVIAISQYILVWGILERFVSEPPTLRYLDLCTVAKISIICLPHKYAGFYLHCDAPYEFADCTM 720          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: T0S4L0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S4L0_SAPDV)

HSP 1 Score: 91.7 bits (226), Expect = 9.380e-20
Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    4 GELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            G  N  LRFANV  WW+ +   QWL  W + E +I E   L F+DL T+AKVS ++LDE YHG+YLHCRSPY+ A   +
Sbjct:  727 GAPNEYLRFANVVAWWTVLTASQWLWRWLIYERWISEPRHLLFLDLCTLAKVSCVLLDEAYHGYYLHCRSPYAFADGSM 805          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: G4YU91_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YU91_PHYSP)

HSP 1 Score: 91.3 bits (225), Expect = 1.280e-19
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    1 AQEGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            A +G++NP LRFANV+ WW  +   Q L  WG+ E YI E     FIDL T++KVS   LDE YHG+YLHCRSP+  A   +
Sbjct:  646 ADDGQVNPYLRFANVSIWWLLIWVGQRLWKWGIYERYIDEPREQLFIDLCTVSKVSCFFLDETYHGFYLHCRSPHPFADGSM 727          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: A0A067C9X5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9X5_SAPPC)

HSP 1 Score: 90.9 bits (224), Expect = 1.750e-19
Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    4 GELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            G  N  LRFANV  WW  +   QWL  W + E +I E   L F+DL T+AKVS ++LDE YHG+YLHCRSPY+ A   +
Sbjct:  700 GAPNEYLRFANVVAWWVVLTASQWLWRWLIYERWIAEPRHLLFLDLCTLAKVSCVLLDEAYHGYYLHCRSPYAFADGSM 778          
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Match: W2RCF9_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RCF9_PHYPN)

HSP 1 Score: 89.4 bits (220), Expect = 6.050e-19
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    1 AQEGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLATMAKVSVLILDEKYHGWYLHCRSPYSKASAGL 82
            A + +LNP LRFANV+ WW FV   Q L  W + E YI E     FIDL T++KVS L LDE YHG+YLHCRSP+  A   +
Sbjct:  581 AADLQLNPYLRFANVSIWWLFVYVGQRLWKWMIFERYIDEPREQLFIDLCTVSKVSCLFLDETYHGFYLHCRSPHPFADGSM 662          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65802.14166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP1_ECTSI2.420e-3875.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z317_9STRA1.560e-2154.55Transmembrane protein 67-domain-containing protein... [more]
A0A1W0A6X7_9STRA5.680e-2152.50Transmembrane protein n=1 Tax=Thraustotheca clavat... [more]
A0A1V9ZL78_9STRA1.060e-2053.16Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A0P1AW11_PLAHL1.980e-2051.81Meckelin isoform x1 n=1 Tax=Plasmopara halstedii T... [more]
A0A812RAQ2_9DINO6.870e-2046.75Tmem67 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
T0S4L0_SAPDV9.380e-2051.90Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
G4YU91_PHYSP1.280e-1951.22Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A067C9X5_SAPPC1.750e-1951.90Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
W2RCF9_PHYPN6.050e-1953.66Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019170MeckelinPFAMPF09773Meckelincoord: 7..79
e-value: 6.9E-14
score: 50.9
IPR019170MeckelinPANTHERPTHR21274UNCHARACTERIZEDcoord: 4..79
NoneNo IPR availablePANTHERPTHR21274:SF0MECKEL-GRUBER SYNDROME (MKS) HOMOLOGcoord: 4..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65802contigH-elongata_contig65802:1923..2669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65802.14166.1mRNA_H-elongata_contig65802.14166.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65802 1923..2669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65802.14166.1 ID=prot_H-elongata_contig65802.14166.1|Name=mRNA_H-elongata_contig65802.14166.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
AQEGELNPALRFANVTFWWSFVCGMQWLITWGLLEPYILEQPALRFIDLA
TMAKVSVLILDEKYHGWYLHCRSPYSKASAGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019170Meckelin