prot_H-elongata_contig65738.14158.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65738.14158.1
Unique Nameprot_H-elongata_contig65738.14158.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length390
Homology
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BLAST of mRNA_H-elongata_contig65738.14158.1 vs. uniprot
Match: A0A6H5JI95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI95_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 5.150e-25
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0 
Query:  313 PEVTEALASLEKAEAVVGIDLPSQDKGPPDADATCVLCPVPRGAFLRADKGNGTVAWCHCLCALSKGLLIEDRIV 387
            PEV  A A+LE+AE  VG+DLPS DKGPPDA+A C+LC VPRGA LRA++G   +AWCHCLCA SKGLLIEDR+V
Sbjct:  833 PEVAAARAALEEAEECVGVDLPSLDKGPPDAEADCILCHVPRGALLRAERGTKGLAWCHCLCAFSKGLLIEDRVV 907
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BLAST of mRNA_H-elongata_contig65738.14158.1 vs. uniprot
Match: D7FWF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF0_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 7.930e-25
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0 
Query:  313 PEVTEALASLEKAEAVVGIDLPSQDKGPPDADATCVLCPVPRGAFLRADKGNGTVAWCHCLCALSKGLLIEDRIV 387
            PEV+ A A+LE+AE  VG+DLPS DKGPPDA+A C+LC VPRGA LRA++G   + WCHCLCA SKGLLIEDR+V
Sbjct:  348 PEVSAARAALEEAEECVGVDLPSLDKGPPDAEADCILCHVPRGALLRAERGTKGLGWCHCLCAFSKGLLIEDRVV 422
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65738.14158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI95_9PHAE5.150e-2570.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWF0_ECTSI7.930e-2569.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65738contigH-elongata_contig65738:763..2526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65738.14158.1mRNA_H-elongata_contig65738.14158.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65738 139..2557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65738.14158.1 ID=prot_H-elongata_contig65738.14158.1|Name=mRNA_H-elongata_contig65738.14158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=390bp
MIDGVVAGERARAGTACKPNGHLRLDVTTTSGEKMPEALFSPAEKEALEK
GEWAPTSSPAVETAPVVLDNVEAGWDMAVVAAAAGVTMVKEKTAVGRGGP
HHTDSGSAFANGARLDYLPNGFVTADGRNELRRGTPAPLAHLSPSGSEGT
ADATKARAEAKMKVNVLKRGGHHAKKRSWDEISTQVNGGCAGAIAASGRT
AAVAGVESEIIGLRRQHSSGMPGTAEEAAASLSLAAEAAISSRNARSLSP
ARVVRHPVACGKKRSSMSSVTARSKAAAESKYHRGGGSGDNHDTMALTKH
RLLERATAFAGVPEVTEALASLEKAEAVVGIDLPSQDKGPPDADATCVLC
PVPRGAFLRADKGNGTVAWCHCLCALSKGLLIEDRIVAA*
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