prot_H-elongata_contig65453.14128.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65453.14128.1
Unique Nameprot_H-elongata_contig65453.14128.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
[Close]
BLAST of mRNA_H-elongata_contig65453.14128.1 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.380e-15
Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = 0 
Query:   50 LVELAQVEANKFEALLARGRQSLDDLIARTLSGNPADGV----GLDDE--LIKARSELTRLWEEGKDQVVGLAGKGEQALEVDQRLASLRSLGKDNPELAKIVSE 148
            L EL + E  + E+L+  GRQ L+ LI   LS     G     G D E  + +A +EL RLWEEGK+Q+  LAGKG +ALE+D+  ++L++L K++PELAKIVS+
Sbjct:  227 LAELTRAETARMESLVESGRQRLEGLIDAALSDGSGSGTSGNHGGDAEGGVGRAGAELMRLWEEGKEQLSELAGKGGEALELDKHFSALKTLSKESPELAKIVSD 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65453.14128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTI7_ECTSI1.380e-1546.67Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65453contigH-elongata_contig65453:1069..2187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65453.14128.1mRNA_H-elongata_contig65453.14128.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65453 1069..2187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65453.14128.1 ID=prot_H-elongata_contig65453.14128.1|Name=mRNA_H-elongata_contig65453.14128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
AALKACVDLTDDNCGESGTGVLFEEEAAPARVVGGADEGRKDQPQRAEHL
VELAQVEANKFEALLARGRQSLDDLIARTLSGNPADGVGLDDELIKARSE
LTRLWEEGKDQVVGLAGKGEQALEVDQRLASLRSLGKDNPELAKIVSE
back to top