mRNA_H-elongata_contig64229.14010.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig64229.14010.1
Unique NamemRNA_H-elongata_contig64229.14010.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: D8LHG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG4_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 9.860e-128
Identity = 214/329 (65.05%), Postives = 253/329 (76.90%), Query Frame = 1 
Query:    1 GSFTPGDEVNVRVKWQEKIFGPREIIAISKG-----KDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSR---LMNGDGGPYSHLEEAVVNIPRNPASYSMETTD----GSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEV-IHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVEEIEAWEAEESSKELWRKAARQQ 948
            GSF PGDE ++RVKWQEK+FGP +++ +S G     K ++QR      +  SRLER YAGH+ED+R++ VDPLESLSEVMLFTYTDKDGFVPPSD  G+    L  GDGGP+S LEEAV ++PR  AS  +ET      G RG      +G R+ ++GV  S+TAA IQAHL REDK+KVMYIMAAVDVDV  A ++ K+ AAA       G GS W  G+D V IH HE+V+CSIKAHQNGTLE+APGFS EEPESGDEGAFLTDHT+KVMDKEGARLT YRFTSPSGGVFSYTVEND+E GGGVEEIEAWEAEE+S++LW+KA+RQQ
Sbjct:   58 GSFLPGDEADIRVKWQEKVFGPEDVVTLSSGQRRGGKSQQQRAVGPPDNALSRLERDYAGHLEDLRRDGVDPLESLSEVMLFTYTDKDGFVPPSDKAGAAEGGLTTGDGGPFSCLEEAVTSMPRTVASSLLETAKTAAGGGRGXXXXXASG-RNSRAGV--SDTAAVIQAHLAREDKYKVMYIMAAVDVDVREATKVAKSRAAAP------GGGSRWRQGEDGVGIHAHEQVVCSIKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHTLKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEEIEAWEAEEASRDLWKKASRQQ 377
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S1XTY5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTY5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.410e-23
Identity = 103/326 (31.60%), Postives = 142/326 (43.56%), Query Frame = 1 
Query:   43 WQEKIFGPREIIAISK-GKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLES-----------LSEVMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAA----IQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAAR---------GRGGSGSFWGGGQDE-----VIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGA-FLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVE--EIEAWEAEESSKE 921
            WQEK FGP E+I  +   K      A        R     A H  +   E  + L S             + ML+TYTD D FV P D+   R                ++I ++  SY+M   +             R K S    S+T  A    +QA L R++ +KVMYIMAAV+VD   A+ + K   AA   R            G+G   G   +E      +  H  V+C IK + +G +EV PGFSE + ES DEG  F+ D  +K   ++G +LT +RF +  G +F Y VEN  E+    E   IEA E E   K+
Sbjct:   66 WQEKKFGPHELIKYNAPNKPHNPTRAEQTYYSMFRRRNWQAKHSGEGTSEEDEALSSARLHGDVTAPDFRQAMLYTYTDGDSFVSP-DAINKRSTTS------------ISIHKSNISYAMTYLN------------QRTKGSSENASDTIPAQVQKLQAALDRQEPYKVMYIMAAVEVDPKEAEELLKKERAAKTTRPIIRRSTIQNLPGAGKLAGPSSEERRPYKALKAHHEVLCQIKLYTSGKMEVQPGFSEAQAESDDEGGGFVDDVALKTQLEQGPKLTTFRFQTAEGRIFEYAVENVNEVDNDDELINIEAHEREIEKKQ 366
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2BNE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNE2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.280e-20
Identity = 79/219 (36.07%), Postives = 109/219 (49.77%), Query Frame = 1 
Query:  220 VMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKR-ITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIY--RFTSPS----GGVFSYTVEN 855
            V LFTY D D F P  +         + GP   L EA+ NI  N AS                            +S  A+++ AHL R+  +KVMY+MAAV VD+  A+  I K  A  +               +D  I + E V+C+IK H+ G+LEV PGFSEEEPES D+G F +  ++K++ + GARLT +  R +SP      GV+ YT+EN
Sbjct:   36 VHLFTYVDTDSFSPSEEKVPRTNSMVEPGP---LAEAMGNI-NNKAS----------------------------LSAGASSVHAHLTRDGMYKVMYLMAAVPVDLSKAEAAIDKKDADRL---------------RDRNI-VQEHVLCAIKFHKKGSLEVTPGFSEEEPESDDDGPFRSAGSLKIIAERGARLTTFTLRVSSPIDGSVAGVYQYTIEN 206
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A2R5GPF1_9STRA (Meckel syndrome type 1 protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPF1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.460e-17
Identity = 83/279 (29.75%), Postives = 124/279 (44.44%), Query Frame = 1 
Query:   43 WQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIP----RNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTL-EVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAE 864
            WQEK FGPRE++     +D      +      + +E  Y   +   R+   D L+    VMLFTYTDKDGFVP ++     +   +    + + E++V IP    R       E  D   G ++   A S ++ SG    E +A  +    RE  FKV Y+MAAVDVD    + + K              G F+           E V+C++K  ++G+L E+ PGFS     +    A   D      D      T YRF +P G ++ Y++ N+AE
Sbjct:  149 WQEKKFGPRELVRYLGSEDEEGNAGMG----RTAIEAEYLEQIARRRRFGEDLLQDAERVMLFTYTDKDGFVPKNEMT-KFVTTSENFSLNPVAESIVTIPGTGGRVAEGREHERDDAFDGADDGDYA-SLERTSGT--GEVSAGQRVF--RESPFKVFYLMAAVDVDAAKLRSLRKE------------DGKFY-----------EVVLCTVKVKRDGSLVEMQPGFSASPSTTAALRARTNDE-----DSGPPPTTWYRFKTPFGSLYEYSLINEAE 389
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7R9Y8G3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8G3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.580e-15
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 1 
Query:  373 TTDGSRGVEEVWMAGSRDKKSGV----RVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDE-GAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAEL 867
            T+  S+    V M     + SG     RV + A  IQA L RE+ +K MYIMAAV+VD   A  + K        RG+           DE +  H +V+  ++ + +G LEV PG SE+ PES D+ G +L D         GA+L  YRF + +G +F Y +EN+ E+
Sbjct:    4 TSAASKSTLAVAMTYMNRRTSGAFEHHRVPKQAQKIQAALLREEPYKAMYIMAAVEVDAKKAAELVKE----QQRRGKRRVVPSMIDFGDE-LDCHHQVLAQLRLYPSGKLEVYPGLSEDTPESDDDHGGYLDDDACDRAAAVGAKLVTYRFQTGNGRLFEYAIENENEV 168
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2K7H6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K7H6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.240e-9
Identity = 51/191 (26.70%), Postives = 92/191 (48.17%), Query Frame = 1 
Query:  310 YSHLEEAVVNIPRNPASYSMETTDG---SRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIH---IHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKV-MDKEGA-RLTIYRFTSPSGGVFSYTVEND 858
            Y++ +  V NI  NP   + ETT     +  +  +    +     G+ ++++AA +Q  L   +  + MY+MAAVD  +   ++                      GG+ +  +    H++V+C++K H+NG LEV PGFS     S DE   +    + + +D + A R+T + FTSP G ++ Y++ N+
Sbjct:  116 YNNRDGFVPNIESNPNLTTSETTKHLPLTEAIPSLQRRQNTGNSGGMPLTKSAAHVQNRLTEGNIIETMYVMAAVDTKMSKWEK----------------------GGKFDTTNDPDYHQQVLCALKLHKNGLLEVTPGFS-----SIDERLQINPSLLTLPLDMDPAHRITTFTFTSPEGSLYEYSIINE 279
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2RYJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYJ1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.130e-9
Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 1 
Query:   43 WQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMN-GDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKK-----SGVRVSETA---AAIQAHLKREDKFKVMYIMAAVDVD 534
            WQEK FGPRE+      +D        I+       +    + E++ Q+       LS+VMLFTYTDKDGFVP  +SE ++ +   +    + + E+++ IP N      +  D      EV+  G   +      + VR S+ +    +    + RE  FKV Y+MAAVD+D
Sbjct:   15 WQEKKFGPRELQKYMPSEDSHAHARTAIQVEYREQLKRRLRYGENLWQD-------LSQVMLFTYTDKDGFVP--NSEFTKFVTTSEEFVLNSVAESIITIPENGGKIVQQDEDDEN---EVYSDGDEHENDSNINNAVRRSKNSLNEVSAGQRIFRETPFKVFYLMAAVDID 175
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BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S4J0B0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0B0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.940e-9
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1 
Query:  643 IHERVICSIKAHQNGTLEVAPGFSEEEPESGD----EGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVEN 855
            +HE V+C ++ H +G LEV PGFSE EPE  D    +  F++D T       G  LT + F+SP G  + YT+E+
Sbjct:    7 LHEEVLCVVRYHSSGLLEVKPGFSEVEPEEDDLYYHDRIFISDATCTTRRSVGPCLTTFCFSSPQGSTYEYTLEH 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LHG4_ECTSI9.860e-12865.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XTY5_9STRA1.410e-2331.60Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2BNE2_9STRA5.280e-2036.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GPF1_9STRA4.460e-1729.75Meckel syndrome type 1 protein-like n=1 Tax=Hondae... [more]
A0A7R9Y8G3_9STRA6.580e-1535.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2K7H6_9STRA1.240e-926.70Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2RYJ1_9STRA4.130e-931.21Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S4J0B0_9STRA4.940e-941.33Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64229contigH-elongata_contig64229:544..3409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.8
Seed ortholog evalue3.7e-107
Seed eggNOG ortholog2880.D8LHG4
Preferred nameMKS1
KEGG koko:K03030,ko:K19332
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000226,GO:0001501,GO:0001578,GO:0001763,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0002009,GO:0003007,GO:0003156,GO:0003205,GO:0003206,GO:0003264,GO:0003266,GO:0003271,GO:0003279,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007568,GO:0007610,GO:0008150,GO:0008340,GO:0008589,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010646,GO:0010669,GO:0014020,GO:0015630,GO:0016020,GO:0016043,GO:0016331,GO:0021915,GO:0022008,GO:0022406,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030111,GO:0030154,GO:0030182,GO:0030326,GO:0030537,GO:0031175,GO:0032501,GO:0032502,GO:0032991,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035148,GO:0035177,GO:0035239,GO:0035295,GO:0035869,GO:0036038,GO:0036064,GO:0042127,GO:0042490,GO:0042592,GO:0042733,GO:0042995,GO:0043009,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043583,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0045995,GO:0048468,GO:0048513,GO:0048568,GO:0048583,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048706,GO:0048729,GO:0048731,GO:0048736,GO:0048754,GO:0048839,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051239,GO:0051640,GO:0051641,GO:0051716,GO:0051960,GO:0060113,GO:0060119,GO:0060122,GO:0060173,GO:0060249,GO:0060271,GO:0060322,GO:0060411,GO:0060429,GO:0060562,GO:0060606,GO:0060756,GO:0060828,GO:0061008,GO:0061009,GO:0061138,GO:0061311,GO:0061822,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0090175,GO:0097711,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1901620,GO:1905330,GO:1905349,GO:1905515,GO:1990403,GO:2000026,GO:2000027,GO:2000050,GO:2000095,GO:2000136,GO:2000826
EggNOG free text desc.smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation
EggNOG OGsKOG4446@1,KOG4446@2759
Ec32 ortholog descriptionB9 domain
Ec32 orthologEc-11_004170.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01002,ko03036,ko03051,ko04121
Hectar predicted targeting categoryother localisation
Exons6
Model size948
Cds size948
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64229.14010.1prot_H-elongata_contig64229.14010.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig64229 544..3409 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931028.2322521-CDS-H-elongata_contig64229:543..7201622931028.2322521-CDS-H-elongata_contig64229:543..720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 544..720 -
1691679668.0174744-CDS-H-elongata_contig64229:543..7201691679668.0174744-CDS-H-elongata_contig64229:543..720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 544..720 -
1622931028.250832-CDS-H-elongata_contig64229:858..9231622931028.250832-CDS-H-elongata_contig64229:858..923Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 859..923 -
1691679668.0352466-CDS-H-elongata_contig64229:858..9231691679668.0352466-CDS-H-elongata_contig64229:858..923Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 859..923 -
1622931028.2668986-CDS-H-elongata_contig64229:1265..14701622931028.2668986-CDS-H-elongata_contig64229:1265..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 1266..1470 -
1691679668.0437202-CDS-H-elongata_contig64229:1265..14701691679668.0437202-CDS-H-elongata_contig64229:1265..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 1266..1470 -
1622931028.284918-CDS-H-elongata_contig64229:1794..20761622931028.284918-CDS-H-elongata_contig64229:1794..2076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 1795..2076 -
1691679668.0531788-CDS-H-elongata_contig64229:1794..20761691679668.0531788-CDS-H-elongata_contig64229:1794..2076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 1795..2076 -
1622931028.3037426-CDS-H-elongata_contig64229:2751..28201622931028.3037426-CDS-H-elongata_contig64229:2751..2820Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 2752..2820 -
1691679668.06765-CDS-H-elongata_contig64229:2751..28201691679668.06765-CDS-H-elongata_contig64229:2751..2820Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 2752..2820 -
1622931028.3211854-CDS-H-elongata_contig64229:3259..34091622931028.3211854-CDS-H-elongata_contig64229:3259..3409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 3260..3409 -
1691679668.0773685-CDS-H-elongata_contig64229:3259..34091691679668.0773685-CDS-H-elongata_contig64229:3259..3409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64229 3260..3409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig64229.14010.1

>prot_H-elongata_contig64229.14010.1 ID=prot_H-elongata_contig64229.14010.1|Name=mRNA_H-elongata_contig64229.14010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp
GSFTPGDEVNVRVKWQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLE
RHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMNGD
GGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVS
ETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGG
SGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAF
LTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVEEIEAWE
AEESSKELWRKAARQQ
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mRNA from alignment at H-elongata_contig64229:544..3409-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig64229.14010.1 ID=mRNA_H-elongata_contig64229.14010.1|Name=mRNA_H-elongata_contig64229.14010.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2866bp|location=Sequence derived from alignment at H-elongata_contig64229:544..3409- (Himanthalia elongata Himel1 dioecious)
GGGTCGTTTACTCCAGGAGATGAGGTAAATGTCCGTGTGAAGTGGCAAGA
AAAGATATTCGGCCCACGGGAAATTATCGCTATCTCGAAAGGCAAGGACA
GACGTCAGCGTGGCGCTATCACTATAAGAAGTCCTTCATCCCGACTCGAG
GTGACCGACTCATCATCAAGTCTTAAGCCGTGATTTAGGAGCATATCTTT
ACAAAATACGGAATTCTTAAGAGCGATAAATCACCCTTGTTGGAGGGGCG
ACGTGATTACTTAATAATATTATGATACGTAGCAACCCTGGTCAATTTTT
CGAAGTTGACCCATTTACTGGCGCAATCAGGGCACTGTTCTAGACAATCC
CTACGTCACCCAACAACGTGGTACAGCGTCCTTGACTAATCGTGGTGTAC
CCAATTTGTTAAGAGATTGGGCCAAATAAGCAAAAGTAATTTGACAACAA
ACAGTGTATTTAGGTTGCATCTGGTCAAATTAAAAAGGCACAGTCCCATT
TTATATGACTAATCGAAAATACGGGGTGGGGTGGGCGGTAATTACCGCGG
GGCTTTCGAACGTCCTCCGGAATAATATTTGGTCAACAGCGGCACTACGC
AGGTCATGTGGAAGATATGAGACAGGAACACGTCGATCCCTTGGAATCTC
TCTCAGAGGTTCGTGCATGTTTCAGCCGCGTTGAGTTTTGAACATACGTG
GGCCGCGCTGAACGTAGCAATATTTCGACGTGTGCTCCATGCAATCTTCG
AGCGTCTAGATTGTCATGTTATCAATCCAAATATAGCGGGGGGAGGGAGC
GTCACATAGTTATGCCCGCTTTTGGGAGGGGAAGATAAAAATTCACCCCC
TTCCGAGGATATGATCGTCCTATCCCAGGTCGTGGCGCTTCATATATGAT
CAATGATCACCGTAATAAACGGGATTTATATGTTTTGTCAGGGAACGAAA
TTAATATGTCTCCTCCACGAATGGGTGCCGTTAAGCACCCCCTTTTCCTA
TCATTGGATTAGTCATGTCAAGAGTAGATCGCGGTACGGTTAATGTAATT
TGGGAGTTGGAGGAAAGAGGTAAACAAGTACACACAGTAGCCACCAAACG
TTTCACGCAACTTTCAGGAGGGGAAAAGCAATAAACGTGCCCCGAGAGTT
AAATGGCGCACGGTAAGGATGTATGGAAGGCAGACAATATTTGTCACACT
CTAACGGCGAGGTTGAGAAAAAGTCTAAGAATCGATATAGAGTACTACCA
GCGATTTCAAGGCTCTACGAATCGATGGCCAAGACAAGATCCGGTGGTTA
GCATTCTCTGGATGATATCGATGCCCTCACCAGGTGATGTTGTTCACATA
CACGGACAAGGACGGATTCGTGCCGCCTTCAGACTCAGAAGGTAGCCGCC
TGATGAACGGGGATGGGGGACCGTACAGTCACCTCGAGGAAGCGGTCGTG
AATATACCTCGAAACCCCGCTTCTTATTCAATGGAGACAACCGACGGCAG
TAGGGGTGTTGAAGAGGTGTGGATGGCAGGAAGTCGTGACAAAAAAAGTG
GCGTACGAGTTTCAGAGACCGCGGCGGCGATACAGGCGCATCTGAAGCGT
GAGGACAAATTCAAGGTAAACGAAAGCAGCTGGCCATCCTCGAAACATGG
CTCATCGCTCCCCCCTTTCTTTTTAGCTTACAGGTTAAACGTGCGTTACC
AAGTTTCGACTAGCTTTAATGAAGCCCGGCGCATCTATGGAGAAACATGG
CGCTGCTGGCGATAAAAATTGTGTTTTTGTGGACAACGATGAATTTGAAA
CGTTTTGGTGGGAGCAAGTTACATGGGCTATGGTTTCCGACAGTTTTATA
ATGCTTGGTCTTCGGGGGACGAATCTAAAAAGTTGTTAATTTAACATCGC
GTCGCCCGTTTTCGGGTGGGTTAAAATGCTGCAAAGTAGGTGATGTATAT
CATGGCGGCCGTGGACGTCGACGTGCCGAATGCAAAGCGGATAACTAAGG
CCGGGGCAGCAGCGGTAGCAGCTCGTGGAAGAGGTGGATCTGGCTCGTTT
TGGGGAGGTGGGCAAGACGAGGTGATTCACATCCACGAACGCGTGATATG
CTCCATCAAGGCGCATCAAAACGGAACACTGGAGGTCGCACCAGGTGTGA
CCTTGATATATTTATTTTTCAGCATAGGGACAGATGTAGAGGTAAGCTTC
AGCAGGAAATACCTCGATGTTGAAAAAAAAAAAAAAATGAACATTTGTGC
ACTCAATCAGTACCAGATAAACAAANNNNNNNNNNTACAAAATAAGAAAA
AATGTAGAAGTAAACTAAAGAAGAAAATAAATAAAAAAAAAAAAAAAAAA
AAAATGAACATTTGTGCACTCAATCAGTACCAGATAAACAAATTATATAG
ATAGCGTTATTACCGCAAAACCTACCAATCAATGCTGATCGAGCTCATTG
CTATCCTACGCGCTGGCTGCCCTGAATGGATGGAAGGCTTTTCTGAGGAG
GAACCAGAATCGGGAGACGAAGGGGCTTTCCTCACGGACCATACCGTCAA
GGTGAAGCGATGTGATTCCATCGAAGACGCAGAGAGCGCTAACCCAAGCC
CGCTAGAGATATTGGTGGCGTGGTCCCTACATTATACGCTTGACGCTAGC
GGCGTAATGTACTTCGTTTATTTGTACGCCCAACGAAAGGTTATGGACAA
GGAGGGTGCCCGGCTTACCATCTATCGTTTTACATCTCCTTCGGGGGGGG
TGTTCTCATATACGGTGGAGAATGACGCGGAACTGGGAGGTGGGGTAGAG
GAGATCGAGGCATGGGAAGCGGAGGAATCTTCAAAGGAGCTATGGAGGAA
AGCCGCTCGGCAACAG
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Coding sequence (CDS) from alignment at H-elongata_contig64229:544..3409-

>mRNA_H-elongata_contig64229.14010.1 ID=mRNA_H-elongata_contig64229.14010.1|Name=mRNA_H-elongata_contig64229.14010.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at H-elongata_contig64229:544..3409- (Himanthalia elongata Himel1 dioecious)
GGGTCGTTTACTCCAGGAGATGAGGTAAATGTCCGTGTGAAGTGGCAAGA
AAAGATATTCGGCCCACGGGAAATTATCGCTATCTCGAAAGGCAAGGACA
GACGTCAGCGTGGCGCTATCACTATAAGAAGTCCTTCATCCCGACTCGAG
GGGTCGTTTACTCCAGGAGATGAGGTAAATGTCCGTGTGAAGTGGCAAGA
AAAGATATTCGGCCCACGGGAAATTATCGCTATCTCGAAAGGCAAGGACA
GACGTCAGCGTGGCGCTATCACTATAAGAAGTCCTTCATCCCGACTCGAG
CGGCACTACGCAGGTCATGTGGAAGATATGAGACAGGAACACGTCGATCC
CTTGGAATCTCTCTCAGAGCGGCACTACGCAGGTCATGTGGAAGATATGA
GACAGGAACACGTCGATCCCTTGGAATCTCTCTCAGAGGTGATGTTGTTC
ACATACACGGACAAGGACGGATTCGTGCCGCCTTCAGACTCAGAAGGTAG
CCGCCTGATGAACGGGGATGGGGGACCGTACAGTCACCTCGAGGAAGCGG
TCGTGAATATACCTCGAAACCCCGCTTCTTATTCAATGGAGACAACCGAC
GGCAGTAGGGGTGTTGAAGAGGTGTGGATGGCAGGAAGTCGTGACAAAAA
AAGTGGCGTACGAGTTTCAGAGACCGCGGCGGCGATACAGGCGCATCTGA
AGCGTGAGGACAAATTCAAGGTGATGTTGTTCACATACACGGACAAGGAC
GGATTCGTGCCGCCTTCAGACTCAGAAGGTAGCCGCCTGATGAACGGGGA
TGGGGGACCGTACAGTCACCTCGAGGAAGCGGTCGTGAATATACCTCGAA
ACCCCGCTTCTTATTCAATGGAGACAACCGACGGCAGTAGGGGTGTTGAA
GAGGTGTGGATGGCAGGAAGTCGTGACAAAAAAAGTGGCGTACGAGTTTC
AGAGACCGCGGCGGCGATACAGGCGCATCTGAAGCGTGAGGACAAATTCA
AGGTGATGTATATCATGGCGGCCGTGGACGTCGACGTGCCGAATGCAAAG
CGGATAACTAAGGCCGGGGCAGCAGCGGTAGCAGCTCGTGGAAGAGGTGG
ATCTGGCTCGTTTTGGGGAGGTGGGCAAGACGAGGTGATTCACATCCACG
AACGCGTGATATGCTCCATCAAGGCGCATCAAAACGGAACACTGGAGGTC
GCACCAGGTGATGTATATCATGGCGGCCGTGGACGTCGACGTGCCGAATG
CAAAGCGGATAACTAAGGCCGGGGCAGCAGCGGTAGCAGCTCGTGGAAGA
GGTGGATCTGGCTCGTTTTGGGGAGGTGGGCAAGACGAGGTGATTCACAT
CCACGAACGCGTGATATGCTCCATCAAGGCGCATCAAAACGGAACACTGG
AGGTCGCACCAGGCTTTTCTGAGGAGGAACCAGAATCGGGAGACGAAGGG
GCTTTCCTCACGGACCATACCGTCAAGGCTTTTCTGAGGAGGAACCAGAA
TCGGGAGACGAAGGGGCTTTCCTCACGGACCATACCGTCAAGGTTATGGA
CAAGGAGGGTGCCCGGCTTACCATCTATCGTTTTACATCTCCTTCGGGGG
GGGTGTTCTCATATACGGTGGAGAATGACGCGGAACTGGGAGGTGGGGTA
GAGGAGATCGAGGCATGGGAAGCGGAGGAATCTTCAAAGGAGCTATGGAG
GAAAGCCGCTCGGCAACAGGTTATGGACAAGGAGGGTGCCCGGCTTACCA
TCTATCGTTTTACATCTCCTTCGGGGGGGGTGTTCTCATATACGGTGGAG
AATGACGCGGAACTGGGAGGTGGGGTAGAGGAGATCGAGGCATGGGAAGC
GGAGGAATCTTCAAAGGAGCTATGGAGGAAAGCCGCTCGGCAACAG
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