prot_H-elongata_contig6404.13991.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6404.13991.1
Unique Nameprot_H-elongata_contig6404.13991.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
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BLAST of mRNA_H-elongata_contig6404.13991.1 vs. uniprot
Match: A0A6H5KIQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ0_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.150e-12
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:    2 SAFKKIPLHTTTLRNLGNFKAALLGG--VKKIAGISKPRGFHLVKDGEQQVTVGMKEF 57
            +A+K +P+HTTTLRNLGNFK     G  V+ I GI+K R F L+KDG  QVTVGMKE+
Sbjct:   18 AAYKTLPVHTTTLRNLGNFKGVFPPGPVVRNIHGITKSRAFQLLKDGPSQVTVGMKEY 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6404.13991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KIQ0_9PHAE1.150e-1260.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6404contigH-elongata_contig6404:111..281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6404.13991.1mRNA_H-elongata_contig6404.13991.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6404 111..1766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6404.13991.1 ID=prot_H-elongata_contig6404.13991.1|Name=mRNA_H-elongata_contig6404.13991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MSAFKKIPLHTTTLRNLGNFKAALLGGVKKIAGISKPRGFHLVKDGEQQV
TVGMKEF
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