prot_H-elongata_contig6354.13930.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6354.13930.1
Unique Nameprot_H-elongata_contig6354.13930.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length232
Homology
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 7.200e-48
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+ T A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E I    G++   +ECIS  L+K R+ I     VTFVV YAPTE   +T G     K  +  A+++ +  V +R+++ +L+ ANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:    8 DLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGCCDA--KIMGANGRDIMNNNGERLLELASDNQLSLTNTYFPTPKGGVQHTF 231          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.230e-46
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTF+V YAPTE    TEG     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  174 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 397          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.450e-46
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT++  PK GV +TF
Sbjct:   85 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTF 308          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 6.020e-45
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+ I E +    G++   +ECI   L+K R+ I     V FVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:   80 DLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 303          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.010e-44
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+ T A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  656 DLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 879          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.360e-44
Identity = 96/226 (42.48%), Postives = 138/226 (61.06%), Query Frame = 0
Query:   13 DELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAP-TEEATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            D++ FGTFN+RT A +G N IGH + ++++ C T GCDVIGLQET+R+G   I   GY V +S    G K ++  HGVG+AI E + + AG++   +ECIS  L+K R+ I     VTFVV YAP T   T G     K     A+++ +  V +R+++ +L+DANA T  R +G  DA  K++G  GRD++N NG+        N+L+L NT+   PK GV +TF
Sbjct:  121 DDVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDGCCDA--KIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYFRTPKGGVQHTF 344          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.740e-43
Identity = 89/218 (40.83%), Postives = 132/218 (60.55%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIP 223
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECI   L+K R+ I     +TFVV YAPTE    T G     K  +  A+++ +  V + +++ +L+DANART +R +G  DA  K++GV GRD++N NG+ L      N+L+L NT+   P
Sbjct:  147 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCCDA--KIMGVYGRDIMNNNGERLLGLASNNQLSLTNTYFRTP 362          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.530e-42
Identity = 92/226 (40.71%), Postives = 136/226 (60.18%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTEEA--TEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTF++RT   +G N IGH +  +++     GCDVIGLQET+R+G   I   GY + +S    G K ++ + GVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  154 DLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 377          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 6.400e-41
Identity = 91/226 (40.27%), Postives = 135/226 (59.73%), Query Frame = 0
Query:   14 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            +L FGTFN+RT A +G N IGH + ++++     GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I +   V  VV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+        N+L+L NT+   PK  V +TF
Sbjct:  132 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERRLGLASDNQLSLTNTYFRTPKGKVQHTF 355          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.140e-39
Identity = 82/201 (40.80%), Postives = 120/201 (59.70%), Query Frame = 0
Query:   38 SLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 231
            ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R   GG  ++KVLG  GRD++N NG+ L      N+ +L NT+   PK GV +TF
Sbjct:    2 TVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTF 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZE6_9PHAE7.200e-4842.04Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE2.230e-4642.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMB4_9PHAE5.450e-4642.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KV75_9PHAE6.020e-4541.15Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K1H7_9PHAE2.010e-4442.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDU4_9PHAE2.360e-4442.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L660_9PHAE5.740e-4340.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN7_9PHAE4.530e-4240.71Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5A7_9PHAE6.400e-4140.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE2.140e-3940.80Endo/exonuclease/phosphatase domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 21..231
e-value: 7.7E-16
score: 60.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 19..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6354contigH-elongata_contig6354:1045..1740 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6354.13930.1mRNA_H-elongata_contig6354.13930.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6354 1045..1740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6354.13930.1 ID=prot_H-elongata_contig6354.13930.1|Name=mRNA_H-elongata_contig6354.13930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MKHRTTRVRSLLDELIFGTFNIRTAAVNGVNGIGHIDSLLRPCDTRGCDV
IGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNK
AGKDDIAIECISACLLKARISIKYNFVTFVVAYAPTEEATEGEKAKYIEA
INSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKN
GKLLPSFTEYNKLALLNTFLCIPKNGVSYTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf