prot_H-elongata_contig117990.1392.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig117990.1392.1
Unique Name	prot_H-elongata_contig117990.1392.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	89

Homology

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5JUT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.920e-12
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 0

Query:    1 KGQHGVGLAIKE---EIVNKDDIAIECISARLLKARISI-KSNFVTFVIAYAPTEEAME------GEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            +G HGVG+AIKE   E V ++   +ECIS RL+KAR+ I ++  VTFV+ YAPTE            K  +  AL++ +  V +R+ + +L DANARTG
Sbjct:   48 RGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKARLQIGRTCRVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVYSRDHLVVLMDANARTG 146

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.170e-11
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A++E +        E +  RL+  R  +  +   VTFV AYAPT+ A    K  +   L+S V  +PA+E++F+L DANA+TG
Sbjct:  371 GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG 460

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 5.370e-11
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A++E +        E +  RL+  R  +  +   VTFV AYAPT+ A    K  +   L+S V   PA+E++F+L DANA+TG
Sbjct:  139 GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG 228

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 5.490e-11
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A++E +        E +  RL+  R  +  +   VTFV AYAPT+ A    K  +   L+S V   PA+E++F+L DANA+TG
Sbjct:   84 GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG 173

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 5.540e-11
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A++E +        E +  RL+  R  +  +   VTFV AYAPT+ A    K  +   L+S V   PA+E++F+L DANA+TG
Sbjct:  575 GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG 664

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 7.310e-11
Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A++E +        E +  RL+  R  +  +   V FV AYAPT+ A    K  +   L+S V  +PA+E++F+L DANA+TG
Sbjct:  109 GTHGVGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTG 198

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.520e-10
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 0

Query:    2 GQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSN--FVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            G HGVG+A+KE +        E I  RL+  R+ +  +   V FV A APTE +    K  +   L+S V  +P++E V++L DANARTG
Sbjct:  123 GVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTG 212

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: UPI001E1CE094 (uncharacterized protein LOC123498409 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE094)

HSP 1 Score: 62.0 bits (149), Expect = 3.160e-9
Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 0

Query:    4 HGVGLAIKEEIVNKDDIAIECISARLLKARISI-KSNFVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            HGVG AI+ ++V + ++A + I+ RL+  RI I + + +T +  YAPT  + + +KA +   L+ T+ +VPA + + +L D NAR G
Sbjct:  177 HGVGFAIRSQLVQQHNLAPKAINERLMTVRIPITRDSQLTLISVYAPTLTSTDEDKAAFYTQLDRTIQAVPANDKLVVLGDFNARVG 263

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: A0A812DDH2_SEPPH (Hypothetical protein n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DDH2_SEPPH)

HSP 1 Score: 56.2 bits (134), Expect = 3.270e-7
Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0

Query:    4 HGVGLAIKEEIVNKDDIAIECISARLLKARISI-KSNFVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            HGVG AI+ ++V + ++A   IS RL+  R+ I +   +T +  YAPT  + + +KA +   L+ T+    A + + +L + NAR G
Sbjct:  156 HGVGFAIRSQLVQQHNLAPTAISERLMTVRLPIMRGRHITLISVYAPTLNSPDEDKAAFYTQLDHTIQRATANDKLIVLGEFNARVG 242

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BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Match: G1KXV4_ANOCA (Endo/exonuclease/phosphatase domain-containing protein n=5 Tax=Anolis carolinensis TaxID=28377 RepID=G1KXV4_ANOCA)

HSP 1 Score: 55.1 bits (131), Expect = 8.300e-7
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0

Query:    4 HGVGLAIKEEIVNKDDIAIECISARLLKARISI-KSNFVTFVIAYAPTEEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG 89
            HGVG AI+ ++V     A   I+ RL   RI++ K+   T + AYAPT +A E  K K+   L++ +S +P  + + +L D NAR G
Sbjct:   75 HGVGFAIRNDLVKHLTEAPTGINERLSTLRINLAKNQQATIICAYAPTLDADEDIKEKFYCQLDTILSEIPKEDKIILLGDFNARVG 161

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot

BLAST of mRNA_H-elongata_contig117990.1392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUT2_9PHAE	3.920e-12	43.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K319_9PHAE	2.170e-11	40.00	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KQZ7_9PHAE	5.370e-11	40.00	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K7U5_9PHAE	5.490e-11	40.00	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JLM6_9PHAE	5.540e-11	40.00	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K9G5_9PHAE	7.310e-11	38.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JBD7_9PHAE	3.520e-10	40.00	Reverse transcriptase domain-containing protein n=...	[more]
UPI001E1CE094	3.160e-9	36.78	uncharacterized protein LOC123498409 n=1 Tax=Portu...	[more]
A0A812DDH2_SEPPH	3.270e-7	33.33	Hypothetical protein n=1 Tax=Sepia pharaonis TaxID...	[more]
G1KXV4_ANOCA	8.300e-7	37.93	Endo/exonuclease/phosphatase domain-containing pro...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 1..89 e-value: 2.6E-5 score: 25.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig117990	contig	H-elongata_contig117990:26..292 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig117990.1392.1	mRNA_H-elongata_contig117990.1392.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig117990 26..292 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig117990.1392.1 ID=prot_H-elongata_contig117990.1392.1|Name=mRNA_H-elongata_contig117990.1392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
KGQHGVGLAIKEEIVNKDDIAIECISARLLKARISIKSNFVTFVIAYAPT
EEAMEGEKAKYIAALNSTVSSVPAREFVFILTDANARTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf