mRNA_H-elongata_contig63229.13896.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 289 bits (740), Expect = 8.390e-96 Identity = 138/192 (71.88%), Postives = 152/192 (79.17%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQ----GAGASVDGEDTERAAPGFEAFCATLITHFTCALAKKEVLWLKRAE 564
KT I R K +WRIRDEEPWKSYK+KLYNADGT TEC GAW+IVDGGY KIPLLIPPIKTH TVEEH WSRRLES+RKDIECCFGRVKG WRLF G ILF+TR K+DNAWFTACILHNMLH+FN+LDEMEED DW+GSA + + G VD E++E GFE F LI HF CA KKE+LW RAE
Sbjct: 117 KTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREATAVGVAMDVD-EESEPPTSGFEEFRRKLIAHFACAWEKKEILWFTRAE 307
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI) HSP 1 Score: 275 bits (702), Expect = 3.440e-90 Identity = 136/195 (69.74%), Postives = 149/195 (76.41%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVG----QGAGASVDGED---TERAAPGFEAFCATLITHFTCALAKKEVLWLKRAE 564
KT I RDKSVWRIRDEEPWKS KYKL NADGT TE GAWLIVDGGY KIPLL+PPIKTH ++E H SRR+ES+RKDIECCFGRVKGRWRLF+G I F +REKIDNAW TACILHNMLH FN LDEMEED DWVGSAGE+G Q G + E TE AAPGF+ F A L+ HF K+V W KRA+
Sbjct: 102 KTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQ 296
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 242 bits (618), Expect = 4.520e-78 Identity = 111/142 (78.17%), Postives = 122/142 (85.92%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVG 426
KT I RDKS+WRIRDEEPW S KYKLYNADG+ TE KGAWL+VDGGYQKIPLLIPPIK H TVEEHDWSRRLES+RKDIECC+GRVKGR+RLFK GIL+ TR+ IDN WFTACILHNMLH ++KLD M E T W GSA +G
Sbjct: 106 KTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQGSARPLG 247
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE) HSP 1 Score: 234 bits (597), Expect = 4.400e-74 Identity = 118/191 (61.78%), Postives = 133/191 (69.63%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQGA--GASVD-GEDTERAAPGFEAFCATLITHFTCALAKKEVLWLKRAE 564
K I RDKS+WR+RDE+PWKSYK+KLYNADGT TE GAW+IVDGGY KIPLLIPPIKTH TVEEH+WSRRLES+RKDIECCFGRVKGRW LF G I FN +LDEMEED DWVGS G +G+ A++D GE++E P FE LI HFTCA +KE LW KRAE
Sbjct: 135 KKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFFN-----------------------RLDEMEEDADWVGSGGRLGEATTVAAAMDVGEESETPTPRFEESRKKLIAHFTCAWEEKETLWFKRAE 302
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 232 bits (592), Expect = 1.450e-73 Identity = 126/220 (57.27%), Postives = 141/220 (64.09%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQK----------------------------IPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQG----AGASVDGEDTERAAPGFEAFCATLITHFTCALAKKEVLWLKRAE 564
KT I RDKS+WRIRDEEPWKSY + AW+IVDGGY K IPLLIPPIKTH TVEEHDWSRRLES+RKDIECCFGRVKGRWRLF G +LF+TR+K+DNAWFTACILHNMLH+FN+LDEMEED WVGSAG +G+ A VD E++E PGFE F KKE+LW KRAE
Sbjct: 95 KTVIARDKSIWRIRDEEPWKSYYTR-------------AWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGEATAVAAAMDVD-EESEAPTPGFE--------EFRREWEKKEILWFKRAE 292
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 231 bits (590), Expect = 3.010e-71 Identity = 116/165 (70.30%), Postives = 130/165 (78.79%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQGAG--ASVD-GEDTERAAPGFE 486
KT I RDKS+WRIRDEEPWKSY + AW+IVDGGY KIPLLIPPIKTH TVEEHDWSRRLES+RKDIECCFGRVKGRWRLF G ILF+TR+K DNA FTACILHNMLH+FN+LDEMEED DWVGSAG +G+ A A++D E++E P FE
Sbjct: 182 KTVIARDKSIWRIRDEEPWKSYYTR-------------AWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGEAAAVAAAMDVDEESETPTPDFE 333
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5KCK8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK8_9PHAE) HSP 1 Score: 204 bits (520), Expect = 7.260e-62 Identity = 104/177 (58.76%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQK--------------IPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLF--------------------KGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQ 429
KT I RDKS+WRIRDEEPWKSY + AW+IVDGGY K IPLLIPPIKTH TV+EHDWSRRL+++RKDIECCFGRVKGRWRLF G ILF+ R+K+DNAWFTACILHNMLH+FN+LDEMEED WVGSAG +G+
Sbjct: 81 KTVIARDKSIWRIRDEEPWKSYDTR-------------AWIIVDGGYPKASFGCCHFRSAVSQIPLLIPPIKTHNTVKEHDWSRRLDNMRKDIECCFGRVKGRWRLFGVPVGNNAFSQRXXXXXXXXXGDILFSARQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGE 244
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 196 bits (499), Expect = 5.460e-58 Identity = 90/147 (61.22%), Postives = 110/147 (74.83%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEVGQGAGA 441
KT + RD SV R+R+EEPW SYK+ L++ +G TE G WLIVDGGY ++P LI P K + + + +WS+R ESIRKDIEC FGR+KGR+RLFK GILF TREKIDNAWFTACI+HNMLH F+ L +E+D DW G GE Q GA
Sbjct: 240 KTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGA 386
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 196 bits (498), Expect = 8.590e-57 Identity = 101/197 (51.27%), Postives = 122/197 (61.93%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGE------------VGQGAGASVDGEDTERAAPGFEAFCATLITHFTCALAKKEVLWLK 555
KT + RD SV R+ EEPW SYKY++Y+ G TE G WLI DGGY ++PLLI P K + V E WS+RLES+RKDIEC FGR+KGR+RLFK GILF R KID+AWFTACI+HNML AF+ LD++E D DW G GE V A V G+D F A L+ HF A + EV W +
Sbjct: 338 KTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAA----FHAHRQCLVDHFAFAKSSSEVQWFR 530
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 187 bits (475), Expect = 6.150e-56 Identity = 86/141 (60.99%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 1 KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIPLLIPPIKTHITVEEHDWSRRLESIRKDIECCFGRVKGRWRLFKGGILFNTREKIDNAWFTACILHNMLHAFNKLDEMEEDTDWVGSAGEV 423
KT + RD SV R+ EEPW SYKY++Y+ G TE G WLI +GGY ++PLLI P K + V E WS+RLES+RKDIEC FGR+KGR+RLFK GILF R KID+AWFTACI+HNML AF+ LD++E D DW G GE
Sbjct: 106 KTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEA 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63229.13896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63229.13896.1 >prot_H-elongata_contig63229.13896.1 ID=prot_H-elongata_contig63229.13896.1|Name=mRNA_H-elongata_contig63229.13896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp KTAIGRDKSVWRIRDEEPWKSYKYKLYNADGTRTECKGAWLIVDGGYQKIback to top mRNA from alignment at H-elongata_contig63229:1712..3270- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63229.13896.1 ID=mRNA_H-elongata_contig63229.13896.1|Name=mRNA_H-elongata_contig63229.13896.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1559bp|location=Sequence derived from alignment at H-elongata_contig63229:1712..3270- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63229:1712..3270- >mRNA_H-elongata_contig63229.13896.1 ID=mRNA_H-elongata_contig63229.13896.1|Name=mRNA_H-elongata_contig63229.13896.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at H-elongata_contig63229:1712..3270- (Himanthalia elongata Himel1 dioecious)back to top |