prot_H-elongata_contig63013.13879.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63013.13879.1
Unique Nameprot_H-elongata_contig63013.13879.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: D7G1M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M6_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 9.030e-34
Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 MQSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQRQV 77
            MQ DLN+VFVGP FDFTTRYSYLLTLLF AM +SGGMF MN LSF F F+TYWVDK  +LR+YRRPPHREDALQ+QV
Sbjct:  424 MQGDLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQV 500          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7R9U1E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1E9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.280e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPH 68
            Q +LND F+GP FD + RY+ ++  +FV M++S GM ++N + F  + + YWVDK+  LR +R PP+
Sbjct:  251 QRELNDAFLGPDFDISLRYAQIIATIFVCMMYSAGMPMLNVICFLSMLIFYWVDKLMFLRLWRTPPY 317          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S1CHI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHI6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.240e-11
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQRQVI 78
            QSD+ND FVG  FD + RY  L+  LF  +++  GM  +  ++     + +W+DKI +LR+Y++PP  ++AL +Q I
Sbjct:   54 QSDMNDAFVGAEFDLSIRYPELMNTLFTTLLYCAGMPYLLPMAVGSFVLRFWIDKILLLRYYKKPPAYDEALGKQAI 130          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S3NH94_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3NH94_9SPIT)

HSP 1 Score: 65.1 bits (157), Expect = 1.290e-10
Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQR 75
            Q D   +++GP +    RYS +LT++F+A++F  GM ++   +    FVTYWVDKI +LR YR+PP     L +
Sbjct:  122 QIDYETLYMGPEYMLEYRYSNMLTMIFIALMFGCGMPILYLFAALTFFVTYWVDKIALLRIYRKPPRYGSMLMK 195          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S1CHA1_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHA1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.320e-10
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQR 75
            QS L  +++GP F    RYS  +  ++VA  +S GM ++  L+  F FVT+WVDKI  +RFYRRPP  + ++ R
Sbjct:  979 QSHLEHLYLGPEFHLADRYSQAVMTIWVAFSYSAGMPLLLPLAACFFFVTFWVDKILFVRFYRRPPTYDASIAR 1052          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A1Y1HRS1_KLENI (RRM domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRS1_KLENI)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-9
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    1 MQSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDAL 73
            +QSDLN +  G  F    RY  LLTL+FVAMVFS G+ +++ +    + + YWVDKI +LR  R P   +D +
Sbjct:  639 IQSDLNKLMEGLEFTLADRYGQLLTLIFVAMVFSAGIPILHLILTAAIHIIYWVDKITLLRLSRTPAQYDDTM 711          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A1R2B7R1_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B7R1_9CILI)

HSP 1 Score: 60.5 bits (145), Expect = 6.920e-9
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPP 67
            Q  LN  F GP FD +   S LL ++F + ++S G+  +N L    LFVTYW +KI +LR+YR PP
Sbjct:  247 QYKLNKFFRGPNFDISDSLSQLLAVIFTSYMYSAGIPFLNILCGMMLFVTYWTNKILLLRYYRTPP 312          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S1MA19_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MA19_ALECA)

HSP 1 Score: 59.7 bits (143), Expect = 7.360e-9
Identity = 25/66 (37.88%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPP 67
            Q++L +++  P FD +TRY+ L+  +FV +++S G+ ++N  +  ++F+ YWVDK  +LR  +RPP
Sbjct:    9 QTELLELYTNPVFDISTRYAQLVMTVFVTLMYSSGLPLLNLFAAAYMFMMYWVDKYVLLRASKRPP 74          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S1DZH8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DZH8_HEMAN)

HSP 1 Score: 60.1 bits (144), Expect = 9.680e-9
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    2 QSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQRQVI 78
            Q  LN  ++G  F  +TRY  LL  +F   +++ GM ++  +     FVTYW+DKI +LRF R PP   D L   ++
Sbjct:  494 QQALNIAYLGADFVLSTRYGMLLNTIFTCFMYASGMPILLFVGACICFVTYWIDKIQLLRFSRLPPQYSDKLAMYIL 570          
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Match: A0A7S2BZD3_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2BZD3_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 2.150e-8
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    8 VFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFVTYWVDKIGILRFYRRPPHREDALQRQ 76
            V+  P +D  +RY+YLL  ++V MV+S GM V+N L+  + F +YW DK  +LR   RPP  +  + R+
Sbjct:    2 VWQNPPWDMASRYAYLLMTVYVTMVYSSGMPVLNLLAMLYCFFSYWSDKAVLLRGSMRPPQYDAVMPRR 70          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63013.13879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G1M6_ECTSI9.030e-3479.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U1E9_9STRA2.280e-1243.28Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1CHI6_9STRA2.240e-1138.96Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3NH94_9SPIT1.290e-1040.54Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A7S1CHA1_9STRA2.320e-1043.24Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
A0A1Y1HRS1_KLENI1.100e-943.84RRM domain-containing protein n=1 Tax=Klebsormidiu... [more]
A0A1R2B7R1_9CILI6.920e-945.45Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S1MA19_ALECA7.360e-937.88Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S1DZH8_HEMAN9.680e-937.66Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2BZD3_9DINO2.150e-840.58Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13018PROBABLE MEMBRANE PROTEIN DUF221-RELATEDcoord: 2..77
NoneNo IPR availablePANTHERPTHR13018:SF91coord: 2..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63013contigH-elongata_contig63013:762..1414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63013.13879.1mRNA_H-elongata_contig63013.13879.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63013 762..1426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63013.13879.1 ID=prot_H-elongata_contig63013.13879.1|Name=mRNA_H-elongata_contig63013.13879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MQSDLNDVFVGPTFDFTTRYSYLLTLLFVAMVFSGGMFVMNGLSFFFLFV
TYWVDKIGILRFYRRPPHREDALQRQVI
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