prot_H-elongata_contig62368.13808.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62368.13808.1
Unique Nameprot_H-elongata_contig62368.13808.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length204
Homology
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: D7FL07_ECTSI (DUF2012 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL07_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.090e-86
Identity = 130/166 (78.31%), Postives = 145/166 (87.35%), Query Frame = 0
Query:    1 MPDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKVDDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVADSASSFSFSDVLTNVLSGNA 166
            MPDRSVVPTTKV LNGGQ ++LTARDGSF FRDV  GVYLLEVLS  FHFSAMK+KVDD TGIIAIEYKYPGAPRKEAIHPLLLTA  KWNHFEK+EG+K+GG  K+PMTI+M+LS  MMFFLPKMMANLDPEQLEEIK QQKAV +S ++ SFS +L+N L+G A
Sbjct:    1 MPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVAAGVYLLEVLSPNFHFSAMKIKVDDMTGIIAIEYKYPGAPRKEAIHPLLLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQA 166          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A6V2I1F6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I1F6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 9.910e-37
Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    1 MPDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKVDDKT--GIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVADSASSFSFSDVLTNVLSGNAAQPP 170
            +PD S + TT++ LN G++TT T  DG+F F  V PGV+LL+V S  +HFS +KV++ +++      IEY +PGAP+  A +P+LLTA AK+ +FEK++G      LKNPM +MMI S G+MF +P MM NLDPE  E ++ Q +  +D     S    L   L+G  AQ P
Sbjct:   36 LPDGSDLNTTRITLNDGEQTTYTRPDGTFTFYHVPPGVHLLDVQSQFYHFSQVKVQLLEESMDAPKCIEYAFPGAPKTVAPYPILLTAHAKYEYFEKQQGFAFSSILKNPMMLMMIFSVGLMFVMPMMMDNLDPEDKERMQKQMEMQSDPQKMLSE---LMGGLTGAPAQAP 204          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A7S0CGJ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGJ2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.520e-36
Identity = 68/140 (48.57%), Postives = 97/140 (69.29%), Query Frame = 0
Query:   14 LNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV------DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVAD 147
            LN G+ +T T RDG+FV  +V+PGV+LL+V S T  FS +K+++      DD+ G+  IEY YPGA ++   HPL+LTA A++ +FE ++G  IG   KNPM IMM+ S G+MFF+PKMM NLD EQ E+++ Q +  +D
Sbjct:    2 LNDGEYSTYTQRDGAFVLYNVLPGVHLLDVQSHTHLFSQVKIQLLEATETDDEMGLKCIEYAYPGASKQAIPHPLILTAHAQYQYFEPRQGFSIGTIFKNPMLIMMLFSVGLMFFMPKMMENLDDEQKEQMQKQMELQSD 141          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A836CIT1_9STRA (DUF2012 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.310e-33
Identity = 65/139 (46.76%), Postives = 97/139 (69.78%), Query Frame = 0
Query:    9 TTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKVDDKT---GIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKI-GGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQK 143
            TT++ LNGG+R+T +   G+FVF  V PGVY+L+V ST++HFS MK+KV ++    GI A+E+ YPGAP+K+A HPL L A A++ +FE +E   +     +NPM I+M L+ G M  +PK+M  +DPE L++ + +QK
Sbjct:   43 TTRLTLNGGERSTYSQASGAFVFHGVGPGVYVLDVQSTSYHFSQMKIKVPEEGEGGGIQALEFVYPGAPKKDAPHPLALAAHAQYAYFEPREAFNVLTAMRRNPMLIIMALAMGAMALMPKLMEGMDPELLKQAQAEQK 181          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A7S2CRA1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CRA1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.680e-31
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    2 PDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQ 141
            PD+S  PTTK+ LN G+  T +  DGSF F DV PGVYLL+VLSTT  FS +K+ +  D +  +  +EY+YPGA ++   +PL L A  K  +FE +E   I   LKNPM+ M I S   +   PKMM ++DPEQ++E++ Q
Sbjct:   40 PDKSTPPTTKLTLNAGEYETFSRFDGSFTFHDVKPGVYLLDVLSTTVMFSQVKLNLPNDPEGKVRCLEYRYPGAMKQPISYPLDLMAHVKIKYFEVRESFGIHTILKNPMSYMAIFSLFFIIVFPKMMNSMDPEQMKEMQDQ 181          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A8J9X420_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X420_PHATR)

HSP 1 Score: 120 bits (301), Expect = 2.500e-31
Identity = 58/137 (42.34%), Postives = 91/137 (66.42%), Query Frame = 0
Query:    9 TTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQK 143
            T++++LN G+ +T +  DGSF    + PG++ L+VLSTT HFS +K+++   D      +EY YPGA +K A +P++L A+A +++FE + G  +   LKNPM +MM  S G+MF +PKMM  L+PE+ E +K Q +
Sbjct:    8 TSRISLNQGEFSTYSQTDGSFKLHSIPPGIHALDVLSTTHHFSQIKIQLVEGDMDNPKCLEYAYPGASKKPASYPVVLKAIATYDYFEPRRGFSVFSMLKNPMFLMMAFSVGLMFLMPKMMEGLEPEERERMKQQME 144          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A6U1YD74_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1YD74_TRICV)

HSP 1 Score: 123 bits (309), Expect = 2.720e-31
Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MPDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVAD 147
            +PD   + +T + LN GQ +T T   G FVF  V PGV++LE  S   HFS +K+++  +       IEY YPGAP++   HPLLLTA A++ +FEK++G  +   L+NPM +MM+ S G+M  +PKMM  LD +Q E++K Q +   D
Sbjct:   59 LPDDKPLNSTLITLNDGQYSTYTQAHGDFVFHAVGPGVHVLEAHSPLHHFSQVKIQLLSESMEAPKCIEYVYPGAPKQAIPHPLLLTAHARYEYFEKRQGFSLFSILRNPMMLMMMFSVGLMLLMPKMMEGLDDDQKEQMKRQMEMQQD 207          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A7S2P968_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P968_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.060e-30
Identity = 64/150 (42.67%), Postives = 95/150 (63.33%), Query Frame = 0
Query:    1 MPDRSV-VPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVAD 147
            +PD +  + +T++ LN G  TT T  +G F+F  V PGV+LL+V S   HFS +K+++  D       IEY YPGAP++   HPL LTA A + ++EK++G  I    KNPM +MM+ + GM+F +PKMM ++DPEQ E ++ Q +   D
Sbjct:   40 LPDSAASLNSTRITLNDGSFTTYTQPNGDFIFHRVPPGVHLLDVQSRQHHFSQVKIQLLEDAMDSPKCIEYVYPGAPKQAMPHPLELTAHASYEYYEKRQGFSIFSIFKNPMILMMLFTGGMLFLMPKMMEDMDPEQKEMMQKQMEFQQD 189          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A7S2SSA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.170e-29
Identity = 63/147 (42.86%), Postives = 95/147 (64.63%), Query Frame = 0
Query:    2 PDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVA 146
            PD +V   T+V LNGG+  TL+  DGSFVF  V PG+YLL+VLS    FS +K+ +  D    I  +EY++PGA ++   +PL L A AK  +FE++E + I  +L+NPM+ M++    ++   PKM+ N+DPEQL+E++  Q  +A
Sbjct:   58 PDHTVPHATRVTLNGGEFETLSLVDGSFVFHHVPPGIYLLDVLSGAALFSQVKINLPSDPDGKIKCLEYRFPGAQKQPMSYPLDLQAHAKLKYFEEREKIGIHTFLRNPMSYMVLFGLFVIVVFPKMIGNMDPEQLKEMQEMQSQMA 204          
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Match: A0A1Z5KBC7_FISSO (DUF2012 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBC7_FISSO)

HSP 1 Score: 117 bits (293), Expect = 2.250e-29
Identity = 59/141 (41.84%), Postives = 93/141 (65.96%), Query Frame = 0
Query:    9 TTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHFSAMKVKV--DDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVKIGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVAD 147
            T+++ LN G+  T +  DGSF   +V PG++ L+V S+ +HF  +K+++  D+      +EY YPGA ++ A +PL+LTA+AK+ +FE + G  I   LKNPM +MM +S  +MF++PKMM  LDPE+ E++K Q +   D
Sbjct:   43 TSRIVLNHGEIATYSRADGSFALYNVPPGIHQLDVFSSVYHFPQIKIQLLEDESADPKCLEYLYPGAKKQFAKYPLVLTAVAKYEYFEPRRGFSIFSLLKNPMFLMMGVSVILMFWMPKMMEGLDPEEREQMKKQMELQKD 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62368.13808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL07_ECTSI1.090e-8678.31DUF2012 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6V2I1F6_9STRA9.910e-3744.77Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0CGJ2_9STRA3.520e-3648.57Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A836CIT1_9STRA1.310e-3346.76DUF2012 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2CRA1_9STRA1.680e-3146.48Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J9X420_PHATR2.500e-3142.34Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A6U1YD74_TRICV2.720e-3142.95Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2P968_9STRA1.060e-3042.67Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2SSA1_9STRA2.170e-2942.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5KBC7_FISSO2.250e-2941.84DUF2012 domain-containing protein n=2 Tax=Fistulif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019008Domain of unknown function DUF2012PFAMPF09430DUF2012coord: 5..112
e-value: 7.5E-19
score: 68.0
IPR039163ER membrane protein complex subunit 7PANTHERPTHR13605UNCHARACTERIZEDcoord: 7..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..203
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62368contigH-elongata_contig62368:513..2697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62368.13808.1mRNA_H-elongata_contig62368.13808.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62368 486..2697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62368.13808.1 ID=prot_H-elongata_contig62368.13808.1|Name=mRNA_H-elongata_contig62368.13808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp
MPDRSVVPTTKVALNGGQRTTLTARDGSFVFRDVVPGVYLLEVLSTTFHF
SAMKVKVDDKTGIIAIEYKYPGAPRKEAIHPLLLTALAKWNHFEKKEGVK
IGGYLKNPMTIMMILSFGMMFFLPKMMANLDPEQLEEIKGQQKAVADSAS
SFSFSDVLTNVLSGNAAQPPAASQQPQASQTQKSSAGHGSGRSSGSRGKK
KHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019008DUF2012
IPR039163EMC7
IPR013784Carb-bd-like_fold