prot_H-elongata_contig623.13801.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig623.13801.1
Unique Nameprot_H-elongata_contig623.13801.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length333
Homology
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BLAST of mRNA_H-elongata_contig623.13801.1 vs. uniprot
Match: A0A6H5KUM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 9.190e-11
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0 
Query:   27 GKKRSKSLADQIYDLSSEVGVLRSRSADIVRALRSTAQGVHELEDAFRPLLVALESGLAECHQADLEAIF 96
            G  +S SLAD++Y+LS ++  LR +SA  V ALR  AQGV EL+ AFRPL  A+E+GLAECHQA+L   +
Sbjct:   15 GPPQSLSLADEVYNLSLKLAELRWQSAGKVDALRCVAQGVPELQQAFRPLHAAVEAGLAECHQANLAVSY 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig623.13801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUM4_9PHAE9.190e-1155.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig623contigH-elongata_contig623:687..2662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig623.13801.1mRNA_H-elongata_contig623.13801.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig623 687..2663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig623.13801.1 ID=prot_H-elongata_contig623.13801.1|Name=mRNA_H-elongata_contig623.13801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=333bp
SVGCLSVGSTDYAGSSRFAKGLGAAGGKKRSKSLADQIYDLSSEVGVLRS
RSADIVRALRSTAQGVHELEDAFRPLLVALESGLAECHQADLEAIFGRSA
VPRGVLGCPPTAGNRDVCSSEFGGTAAAVERLDHLISALYRDVAAAGMLA
DQGERLREIARWARRAISSTTPQPPPTSGARKSEVTTDHATLHRRDACAP
RNSDVIGEPRSALGGGGQWTLRVFQDNDPGPERFGKIESDVLFRSHDRSV
HINAGQSNTHTFNNRSIGSSRRGRKRGGCPIVAVQALRAALSTVDPPATE
APATLPLREGGVEGGASAPSYSLVKSVAGAWSF
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