prot_H-elongata_contig62207.13790.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62207.13790.1
Unique Nameprot_H-elongata_contig62207.13790.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 4.900e-89
Identity = 136/164 (82.93%), Postives = 150/164 (91.46%), Query Frame = 0
Query:    1 AGFDSYLSSKWVVISEGGQLVSSA-DSGHSHSLVHQCLHRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNHVACKIHPQDAVRMTLNCEAGTLSLEVNGVDQGVAFANIPRDVHPAVCFYGITKSVRLVELKRVYGD 163
            A FD  LSSKWVV+SE GQLVSSA D+GH+HSL+HQCL RGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRN V  KIHP D+VR+TLNCE GTL+LEVNGVDQGV F+N+P +VHPAVCFYG+ KSVRLVELKR++G+
Sbjct:  395 AAFDPALSSKWVVVSEAGQLVSSAADNGHTHSLLHQCLRRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNRVTRKIHPLDSVRLTLNCECGTLNLEVNGVDQGVVFSNVPPEVHPAVCFYGVAKSVRLVELKRIFGE 558          
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Match: A0A6H5KD94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD94_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 2.300e-88
Identity = 136/164 (82.93%), Postives = 150/164 (91.46%), Query Frame = 0
Query:    1 AGFDSYLSSKWVVISEGGQLVSSA-DSGHSHSLVHQCLHRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNHVACKIHPQDAVRMTLNCEAGTLSLEVNGVDQGVAFANIPRDVHPAVCFYGITKSVRLVELKRVYGD 163
            A FD  LSSKWVV+SE GQLVSSA D+G+SHSL+HQCL RGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRN +  KIHP D+VR+TLNCE GTLSLEVNGVDQGV F+N+P +VHPAVCFYG+ KSVRLVELKR++G+
Sbjct:  269 AAFDPALSSKWVVVSEEGQLVSSAADNGYSHSLLHQCLRRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNRMTRKIHPLDSVRLTLNCECGTLSLEVNGVDQGVVFSNVPPEVHPAVCFYGVAKSVRLVELKRIFGE 432          
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Match: A0A7S1C7A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7A9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.330e-20
Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = 0
Query:   30 HSLVHQCLHRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGG--RRNHVACKIHPQDAVRMTLNCEAGTLSLEVNGVDQGVAFANIPR-DVHPAVCFYGITKSVRLVELK 158
            +SL++   + GT  WE  L+R+  GDE +  GVA  P+T+  Y+ +   WM+R Y+G TY+     +      KIH  + VR TL+C+AGTL++ +NG DQGV F N+    ++P   FY   + + +  L+
Sbjct:  487 YSLLNVGFNSGTVVWEAHLDRDVDGDEYSLFGVARKPMTSPGYDGNPNTWMIRSYNGVTYAPSAEYKAQSSVAKIHQGNVVRFTLDCDAGTLAVNINGADQGVVFQNLQGITLYPCAMFYSGNRKISIRSLR 618          
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Match: A0A7S0JWR0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JWR0_CAFRO)

HSP 1 Score: 90.5 bits (223), Expect = 3.980e-18
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   17 GGQLVSSADSGHSHSLVHQCLHRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNHVACKIHPQDAVRMTLNCEAGTLSLEVNGVDQG---VAFANIP-RDVHPAVCFYGITKSVRLVELKRVYGDS 164
            G ++  S  S  ++ +    + +G  +WE  +  ++ GDE TCVG    PV++  Y++S  MWMVRCY+G  Y NG   +     IHP + VR   N  AGT+ + ++   Q      F  +  + ++PAVC Y   K++R    K   G S
Sbjct:  313 GDRVWCSTGSSDNYGMATTGVRKGVATWEFEIVSDNHGDEQTCVGFVRRPVSDHRYQNSDDMWMVRCYNGGVYHNG--MSSSVSNIHPGNVVRFKANMTAGTVHMWIDDEPQNGGDPVFTGLTGQTIYPAVCGYSRDKTIRFKSFKTEGGGS 462          
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Match: A0A5A8CKN7_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKN7_CAFRO)

HSP 1 Score: 89.0 bits (219), Expect = 1.640e-17
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   17 GGQLVSSADSGHSHSLVHQCLHRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNHVACKIHPQDAVRMTLNCEAGTLSLEVNGVDQG---VAFANIP-RDVHPAVCFYGITKSVRLVELK 158
            G ++  S  S  ++ +    + +G  +WE  +  ++ GDE TCVG    PV++  Y++S  MWMVRCY+G  Y NG   +     IHP + VR   N  AGT+ + ++   Q      F  +  + ++PAVC Y   K++R    K
Sbjct:  384 GDRVWCSTGSSDNYGMATTGVRKGVATWEFEIVSDNHGDEQTCVGFVRRPVSDHRYQNSDDMWMVRCYNGGVYHNG--MSSSVSNIHPGNVVRFKANMTAGTVHMWIDDEPQNGGDPVFTGLTGQTIYPAVCGYSRDKTIRFKSFK 527          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62207.13790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVC4_ECTSI4.900e-8982.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD94_9PHAE2.300e-8882.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1C7A9_9STRA2.330e-2036.36Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0JWR0_CAFRO3.980e-1832.24Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8CKN7_CAFRO1.640e-1732.19Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.920coord: 6..159
e-value: 1.8E-28
score: 101.3
NoneNo IPR availablePANTHERPTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINcoord: 18..151
NoneNo IPR availablePANTHERPTHR12245:SF13coord: 18..151
IPR003877SPRY domainPFAMPF00622SPRYcoord: 42..146
e-value: 4.6E-8
score: 33.2
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 1..161
score: 10.903
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 3..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62207contigH-elongata_contig62207:2099..2726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62207.13790.1mRNA_H-elongata_contig62207.13790.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62207 2099..2726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62207.13790.1 ID=prot_H-elongata_contig62207.13790.1|Name=mRNA_H-elongata_contig62207.13790.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
AGFDSYLSSKWVVISEGGQLVSSADSGHSHSLVHQCLHRGTWSWELALER
ESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNHVAC
KIHPQDAVRMTLNCEAGTLSLEVNGVDQGVAFANIPRDVHPAVCFYGITK
SVRLVELKRVYGDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR001870B30.2/SPRY
IPR013320ConA-like_dom_sf