mRNA_H-elongata_contig6184.13746.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A6H5JFL6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL6_9PHAE) HSP 1 Score: 332 bits (850), Expect = 9.550e-107 Identity = 207/429 (48.25%), Postives = 247/429 (57.58%), Query Frame = 2
Query: 8 MAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKG-------------------------EHGATERL------------RDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGESAEPRQRLQPMMXXXXXXXAG-----PSEPPQVPPCPAHAVTPWTLRVSPCRGVVGGVGDDEASGREADVGR-------QGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALICDGNDTVIAVYPFYPAYEYRRDHTGVKPVRVRIQGTPLFYP 1147
MAW S PF+RPLLGA KS+L+ FL + G WRED +N+V KYARNRVRLQL+PLL+ELAGGA ALDTR+ E+SRQS RQM+E EA WER++L G G +R R EFPL+AFLR+GP G+G E LPELVREELLHRF+ G++ L YA L+LLMRQVD G R WS+SLEGG+ LRRVG+ R++ +G SE V A TPW + VSP G G A G E D G GMVL+NV+ +LHVRR+K+GDRF+P WRDRP KLKDFLRGQ VPLHRRDEVALICD +D+VIAVYP YP + +D TG +P+RVRI GTPLF P
Sbjct: 1 MAWHSDPFVRPLLGAHKSELLEFLVRGGHAWREDGSNQVAKYARNRVRLQLIPLLRELAGGAKALDTRVEELSRQSHFARQMVEREALHWEREHLSGCRFDDEGGGCSDETDQVGGSDQSAGAGGTVDRSEGVGDVAPSGIRRKEFPLQAFLRKGP---------GGEGSE------------------QGWAGSDLPELVREELLHRFIVANTGNSPLSYANLRLLMRQVDGGDRKWSISLEGGYYLRRVGDLL----RIEQSPADGGIIVSGLEGRVVSEQGIVRHSTDAATTPWEMVVSPW-----GEGGSIALGGEGDSGHGEGRATEAGMVLFNVAAGARLHVRRKKDGDRFQPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDSVIAVYPSYPGFGVCQDSTGEEPIRVRIAGTPLFCP 393
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: D7FGW8_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW8_ECTSI) HSP 1 Score: 285 bits (729), Expect = 6.860e-87 Identity = 188/421 (44.66%), Postives = 222/421 (52.73%), Query Frame = 2
Query: 2 QGMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKG-------------------------EHGATERL------------RDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGESAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVSPC-RGVVGGVGDDEASGR-EADVGRQGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALICDGNDTVIAVYPFYPAYEYRRDHTGVKPVRVRIQGTPLFYP 1147
QGMAW S PF+RPLLGA K++L+ FL + WRED +N+V KYARNRVRLQL+PLL+ELAGG ALDTR+ E+SRQS RQM+E EA RWER +L G G +R R+EFPL+AFLR+GP GDG E LPELVREELLHRF+ G L + Q G LEG R V E R A+TPW + VSP G G+G++ SG E GMVL+NV+ +LHVRR+K+GDRFRP WRDRP KLKDFLRGQ VPLHRRDEVALICD +D VIAVYP YP + +D TG +P+RVRI GTPLF P
Sbjct: 177 QGMAWHSDPFVRPLLGAHKTELLDFLVRGRHAWREDGSNQVAKYARNRVRLQLIPLLRELAGGTKALDTRVEELSRQSHFARQMVEREALRWERAHLSGCRFDDEAGGCRDETDQVGGADQSAGTRGTVDRSGGVGDVAPSGIRREEFPLQAFLRKGP---------GGDGSE------------------QGWAGSDLPELVREELLHRFIVGDL-----------LRIEQSPADGGIMVSGLEG----RTVSEQGIVRHSTD------------------------AAITPWEMVVSPWGEGGSVGLGEEGDSGHGEGRATEAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGFGVCQDSTGEEPIRVRIAGTPLFCP 531
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A4D9DAX5_9STRA (tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAX5_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.460e-35 Identity = 139/401 (34.66%), Postives = 194/401 (48.38%), Query Frame = 2
Query: 2 QGMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKGEHGATERLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQE-----PLPELVREELLHRFVT-GRKGDTSLPYAQLQLLMRQVD------EGGRT----WSVSLEGGFCLRRVGESAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVSPCRGVVGGVGDDEASGREADVGRQGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALIC---DG----NDTVIAVYPF----YPAYEYRRDHTGVKPVRVRI 1123
+GM R+ +++PLL K+ LVRFL + G W ED +N+ KY RN+VRL+L+PL+ ELAGG AL RM E++ QS + + A WE H A L D L GP R + XXXXXXXXXXXX PLP L++EELLHR V G SL YAQ++ M Q+ +GG W + + G+ L R G+ Q + P +P + P ++S R + +S + G MVL +V +L +R R+EGDRF PPWR P+KLKDFLR Q VPLHRRDEV LI +G + VI ++P P+ + + ++ ++P+ +R+
Sbjct: 274 RGMEARAGAYVKPLLHLPKTRLVRFLEREGLAWEEDASNQTEKYKRNKVRLRLLPLMAELAGGEEALKARMEEMAEQSRGLEEWVVRAAREWE-----ARHSAMAPL-DVVDAGIELWLGPPVRFPLPSALSSSSXXXXXXXXXXXXXXXXXXXXXFSASEPLWAPLPRLLQEELLHRLVARASNGAVSLSYAQIRRAMEQLQRDEEEAQGGHKKKLQWRLEMGNGWLLVRQGQVLRLVQEQAHRNPKGNWQQE--NFPVSLPDAGVECLLPTGWQISASR-----LSASPSSSSSSAPG-WSMVLPHVPMGARLRLRNRQEGDRFHPPWRQSPVKLKDFLRAQNVPLHRRDEVMLIVLLSNGPLGVKEEVIGLHPLGCVAAPSLDSQATNSALEPLAIRL 660
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A8J5XS81_DIALT (tRNA(Ile)-lysidine synthetase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XS81_DIALT) HSP 1 Score: 142 bits (359), Expect = 6.510e-33 Identity = 137/402 (34.08%), Postives = 178/402 (44.28%), Query Frame = 2
Query: 5 GMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKGEHGATE--RLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGESA-----------EPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVSPCRGVVGGVGDDEASGREADVGRQGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALIC------DGND---------------TVIAVYPFYPAYEYRRDHTGVKP 1108
GM R PF+RPLLG K L R+L G EWRED +N PKY RNR+RL+LVPLLQ+L G A L R+ ++ Q R++L+ + GA E + DE P A +R R+ GD S LH LP V+ E +HRFV R G S YA+++ + ++ + L GG+ LRR G A PR R + AG + C AHA C VV +E + + LYNV +L VR R+EGD F P WR+RP+KLKDFLRGQ+VPLH R++V LI DG + TV+AVYP + D GV P
Sbjct: 222 GMRARDGPFVRPLLGVGKEALTRWLEAGGLEWREDSSNATPKYKRNRIRLELVPLLQQLTGDA--LGVRLNDLVEQGREARELLDAHLGVDAAGGEAADGGAHEGEAIADE-PAGA-VRTARAAAHARSHA---GDVAFSMAALHVSLDVPQLLA-------LPRAVQTEAIHRFVLRRSGRAST-YAEVRRALDRLRSPNAQSDLHLAGGWLLRRNGNKALVLPSNGALGLAPRGRGA-LETGAWAAAAGSAV------CVAHAAD--------C--VVNVREGEEVHETDETDDAPTITLYNVPPGSRLRVRARREGDTFTPAWRERPVKLKDFLRGQKVPLHARNDVRLIAWDEERTDGTNGQPIGAGRADASTSPTVLAVYPTHVGRACAHDE-GVHP 590
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A0M0JCJ3_9EUKA (tRNA(Ile)-lysidine synthetase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCJ3_9EUKA) HSP 1 Score: 140 bits (353), Expect = 1.310e-32 Identity = 127/383 (33.16%), Postives = 167/383 (43.60%), Query Frame = 2
Query: 5 GMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASR--------WERQYLKGEHG-ATERLRDEFP------LEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGE-----SAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVSPCRGVVGGVGDDEASGREADVGRQGMV------------LYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALICD-GNDTVIAV 1054
GM W+ PF+RPLLG RKS+LV +LR GQEWRED +N VPKY RNRVRLQL+PLL+EL GG L R+ + +QS R+ L H+AS W G G + RLR + P L +R+G D E L + V R G S+PYAQL L Q++ W++ L G ++RVG+ P +R G V W +RV GGV + A+ EA G G + L++V L +R + GDRF P WR+ P+ L +FLRGQRV L RR L+C G+ V+AV
Sbjct: 150 GMRWQDGPFVRPLLGQRKSELVAYLRALGQEWREDASNAVPKYKRNRVRLQLLPLLEELTGGG--LHARIGVLEQQSAQLREWL-HQASHAHLTADPFWSTS--AGARGLSVARLRQQVPMVQDEVLHLLVRDGVEAAES---SAADASE------LEMESPSEIGDEIESVEGAEGARVVAGAPERPSEGSSDGYSVPYAQLVRLRTQLERPSTEWTLDLAGCCIVQRVGDLLTVAPTRPARRPAETTTEDEETLRGSVALDGV---TVRFPVGWDVRVRWAEDG-GGVAEAHATSAEAAAGAAGAIPDDAAAMHEVITLHSVPPDAVLELRTPRPGDRFHPLWREAPIGLTNFLRGQRVALERRRATPLVCQAGSQEVLAV 514
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A6V1QY00_HETAK (tRNA(Ile)-lysidine synthetase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QY00_HETAK) HSP 1 Score: 139 bits (351), Expect = 3.040e-32 Identity = 115/385 (29.87%), Postives = 173/385 (44.94%), Query Frame = 2
Query: 29 FIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKGEHGATERLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGESAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTP----------WTLRVSPCRGVVGGVGDDEASG--------READVGR-QGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALICDGNDTVIAVYPF-YPAYEYRRDHTGVKPVRVRI 1123
+I+PLL K DLV FL + G EWRED +N++ KY RN+VRL ++P L++LAGG+AA R+ E++ QS L + L E +RW QY RD P + PL + + L++ E+L++F+T + G + L + QLQ + V+ WS+ L + L++ GE M+ + P H V W L + G V D +S D + +V +N+ ++ +L +R RK GD+F+ PW + KLKDFLRGQ+V LH RD + L+C G D VIAV P + Y +D TG +R+ +
Sbjct: 261 YIKPLLNVSKQDLVSFLERNGIEWREDSSNKLRKYKRNQVRLDILPQLRDLAGGSAAFRLRIEELAHQSQLLEEHLNIEVTRWNEQY-----------RDSVPSQLL------------------------PLSNFNI--------------VSPLLQNEILYQFITRQTG-SELSFQQLQRIYDMVNSENNIWSIDLGSNWILQQKGE----------MLMLLLAGDSHPGSLLDDSKPKTHCVGETTIFSYVDQHWALEENSS----GWVKDPRSSAFYNSPSAKNNKDFPKIHSVVCFNIQNQQKLEIRFRKAGDKFQAPWLPKDQKLKDFLRGQKVQLHERDLLPLLCLG-DEVIAVIPLGIVSSSYHKDMTGFPAIRITM 580
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A7S3SRF0_EMIHU (tRNA(Ile)-lysidine synthetase n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SRF0_EMIHU) HSP 1 Score: 117 bits (292), Expect = 1.690e-24 Identity = 117/368 (31.79%), Postives = 155/368 (42.12%), Query Frame = 2
Query: 2 QGMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKGEHGATERLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLS-RPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRK-GDTSLPYAQLQLLMRQVDEGGRTWSVSLEGGFCLRRVGESAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVSPCRGVVGGVG------------DDEASGREADV--GRQGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALICDGND-TVIAV 1054
+GM WR+ F+RPLLG RK +L +L G+ WRED TN P Y RNR+RLQL+PLL+EL GG L R+ S QS R+ L+ H A + A+ R G R LS PLL +V+EELLHR G G SL L+ + Q+ G+ W + L GG+ LRR G + + A P+E VP + T ++ S VG G A G A++ G + L + +L +R + GDRF P R P+ L FLRG VPL R L+C N TV+AV
Sbjct: 216 RGMEWRAGRFVRPLLGVRKEELSAYLGALGEGWREDATNAEPTYKRNRIRLQLLPLLEELTGGG--LLARLGAASEQSAQLREWLDQ---------AHAAHVAAD--------PAWARSGGRA--------------LSVAPLL-----------------AAQTMVQEELLHRLARGASVGRLSLTRDALRRVRAQLARSGQEWVLELSGGWLLRRTGATVS--------IAGAEVAAAEPAEKGHVPLTASERDT-TAVQASVAELAVGEAGVRLRHPAELAVRAGVARGPRAELPPGALALRLGGLGSERELTLREWRRGDRFHPQGRRAPVSLSHFLRGLDVPLDERRRAPLLCLPNSSTVVAV 524
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A835Z1B5_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B5_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.290e-23 Identity = 140/473 (29.60%), Postives = 178/473 (37.63%), Query Frame = 2
Query: 32 IRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASRWERQYLKGEHGATERLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTG--------------RKGDTSLPYAQLQLLMRQVDEGGRT-WSVSLEGGFCLRRVGE---------SAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVT------------PWTLRVSPCRGVVGGVGDDEASGREADVGRQ-----------GMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALI---------CDG---------------------------------NDTVIAVYPFYPAYEYRRDHTGVKPVRVRIQG--TPLFY---PPWSERRT 1168
+RPLLGARK+ L +LR+RG +W ED +N K +AGG AAL R+ E+ RQS L M+ A WE Q+L G G++ P + LP LV+EELLHRFV R +L AQ L G W V + GG + R G+ +A XXXXXXX E + C A VT P V+ R V A+ R+ G MVLYNV L VRRR++GDRFRP WR P K+KDFLRGQ VPLHRRD+VAL+ DG V+ VYP + + D TG P+ +R++G T L Y PP + RR+
Sbjct: 322 VRPLLGARKAQLEEYLRRRGVQWLEDPSNATAK---------------RIAGGEAALAARLTELERQSALVADMVRAAAEAWEAQHLPSA---------------------------------GARGVAPPDANALWGPGDFPLPPWADAALPALVQEELLHRFVARGGPARAALAPGLPPRVPGVTLGGAQTAHLAAMARAAGSARWHVDVGGGAAVMRDGDVLRLAHAMGAAXXXXXXXXXXXXXXXXXXXXGE--RTAGCVAGEVTVDEAEARCTITAPPDWEVTATRIGVAEAAGIAAAARDGTSGADRPPAXXXXXXSDMVLYNVPPGAVLRVRRRRDGDRFRPRWRATPAKVKDFLRGQGVPLHRRDDVALVQLSPPPPLPLDGAAGGAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVVGVYPGHASGAVCEDVTGWPPLLLRVRGRDTGLVYEVRPPPARRRS 744
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: L1J2C7_GUITC (tRNA(Ile)-lysidine synthetase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2C7_GUITC) HSP 1 Score: 108 bits (271), Expect = 9.480e-22 Identity = 97/350 (27.71%), Postives = 146/350 (41.71%), Query Frame = 2
Query: 23 PPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEH--EASRWERQYLKGEHGATERLRDEFPLEAFLREGPRQRRQRTEGVGDGDEGLSRPLLHXXXXXXXXXXXXXEQEPLPELVREELLHRFVTGRKGDTSLPYAQLQLLMRQVDE--GGRTWSVSLEGGFCLRRVGE----SAEPRQRLQPMMXXXXXXXAGPSEPPQVPPCPAHAVTPWTLRVS-------PCRGVVGGVGDDEASGREADVGRQGMVLYNVSDRGQLHVRRRKEGDRFRPPWRDRPLKLKDFLRGQRVPLHRRDEVALIC 1027
PP +RPLL K +LVR+L+ Q+WRED +N Y RN+VR+QL+PLLQ+L GG AL +RM +S QS+ +Q +E A ++ R++ K PL+ F E EL+R ++H+F++ D L Y QL + +Q++E WS+ L G+ + R G E + + G PW++ V+ P G + +D ++NV Q+ VR + GDRF P + +LK FLR QR+P+ RDE+ LIC
Sbjct: 243 PPMLRPLLDISKQELVRYLKDLQQDWREDSSNHESTYKRNKVRIQLIPLLQDLCGGKHALASRMNGLSHQSMQLQQWMEEVTPAIKFGRRFDKRT----------LPLDFFYAESR------------------------------------------ELLRNSVIHQFISSEASDLILSYTQLLKIAQQLEEHPNNLNWSLDLGKGWQVLRSGPLLMVDREEGELPNGSVDILGDVNVG-----------VEVDGPWSVMVTAGQKPPPPVEGKRRVLPEDVC-----------FTIHNVPAGSQMIVRTKLAGDRFFPKGVGKDERLKHFLRFQRIPVKERDEIPLIC 518
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Match: A0A7S4C623_CHRCT (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C623_CHRCT) HSP 1 Score: 87.4 bits (215), Expect = 2.380e-16 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query: 5 GMAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQLVPLLQELAGGAAALDTRMAEISRQSLLTRQMLEHEASR 274
GM WR F+RPLLG K DL +L GQEWRED +N KY RNRVRL+L+PLLQEL+GGA L R+ + QSL R +L+ R
Sbjct: 94 GMRWREGRFLRPLLGVSKKDLTAYLNGIGQEWREDSSNAETKYKRNRVRLELLPLLQELSGGA--LSARVQALEEQSLQLRALLDDSRER 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6184.13746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6184.13746.1 >prot_H-elongata_contig6184.13746.1 ID=prot_H-elongata_contig6184.13746.1|Name=mRNA_H-elongata_contig6184.13746.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=388bp MAWRSPPFIRPLLGARKSDLVRFLRQRGQEWREDLTNRVPKYARNRVRLQback to top mRNA from alignment at H-elongata_contig6184:574..6334+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6184.13746.1 ID=mRNA_H-elongata_contig6184.13746.1|Name=mRNA_H-elongata_contig6184.13746.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5761bp|location=Sequence derived from alignment at H-elongata_contig6184:574..6334+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6184:574..6334+ >mRNA_H-elongata_contig6184.13746.1 ID=mRNA_H-elongata_contig6184.13746.1|Name=mRNA_H-elongata_contig6184.13746.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2328bp|location=Sequence derived from alignment at H-elongata_contig6184:574..6334+ (Himanthalia elongata Himel1 dioecious)back to top |