prot_H-elongata_contig61675.13720.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61675.13720.1
Unique Nameprot_H-elongata_contig61675.13720.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Match: D7FKI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI1_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 7.560e-9
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    4 RGGGLASGTQISQSLYSRLLLFLNKRFFLLGAAAAVSFARFSPGVGATGGLLRPEVTVNRAG 65
            RGG   S TQ  +S Y +L  FLNKRFFLLGAAA V+ AR  P  G TGGLL   ++V++AG
Sbjct:   35 RGGADVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAG 94          
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Match: A0A7S0NFI1_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NFI1_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 8.190e-7
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    3 VRGGGLASGTQISQSLYSRLLLFLNKRFFLLGAAAAVSFARFSPGVGATGGLLRPEVTVN 62
            +RGGG       +  +Y  +  FL++R+FL+GAA+AV+ A  +P +G TGG  RPE+TVN
Sbjct:   12 LRGGG---DDATAARVYRAVTGFLDRRYFLVGAASAVAMAAIAPTIGCTGGFFRPELTVN 68          
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Match: A0A835Z827_9STRA (Putative sodium bile acid cotransporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z827_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.910e-5
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   25 FLNKRFFLLGAAAAVSFARFSPGVGATGGLLRPEVTVNRA 64
            FLN  FF+LG    V+ A+ +PG+G TGGLLRPE+ V +A
Sbjct:   51 FLNDNFFILGLVGVVTSAKIAPGLGCTGGLLRPELVVGKA 90          
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Match: C1DY47_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1DY47_MICCC)

HSP 1 Score: 50.1 bits (118), Expect = 1.920e-5
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   17 SLYSRLLLFLNKRFFLLGAAAAVSFARFSPGVGATGGLLRPEVTVNR 63
            SL++R + FL   +FL+G  + V+ A  +PGVGATGG +RPE TVN+
Sbjct:  100 SLWTRTVRFLVANYFLVGMLSGVALAYLAPGVGATGGPVRPEFTVNQ 146          
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Match: A0A6U5I6C1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5I6C1_9EUKA)

HSP 1 Score: 48.1 bits (113), Expect = 9.170e-5
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    3 VRGGGLASGTQISQSLYSRLLLFLNKRFFLLGAAAAVSFARFSPGVGATGGLLRPEVTVNRA 64
            +RGG  A+      +    LL FL++RFF++G A AV+ A   PG+G   G LRPEV+V  A
Sbjct:   78 LRGGERAARRSRLCAALGELLAFLDRRFFIVGVAVAVTAASVFPGLGLPSGPLRPEVSVRWA 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61675.13720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKI1_ECTSI7.560e-956.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0NFI1_9EUKA8.190e-745.00Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A835Z827_9STRA1.910e-555.00Putative sodium bile acid cotransporter n=1 Tax=Tr... [more]
C1DY47_MICCC1.920e-551.06Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A6U5I6C1_9EUKA9.170e-543.55Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61675contigH-elongata_contig61675:2960..3154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61675.13720.1mRNA_H-elongata_contig61675.13720.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61675 2960..3154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61675.13720.1 ID=prot_H-elongata_contig61675.13720.1|Name=mRNA_H-elongata_contig61675.13720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
VDVRGGGLASGTQISQSLYSRLLLFLNKRFFLLGAAAAVSFARFSPGVGA
TGGLLRPEVTVNRAG
back to top