mRNA_H-elongata_contig60819.13620.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.640e-51 Identity = 96/183 (52.46%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-----------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F ++MILVLDNASYHHGFD EVKVPETN K +NV+LLR FGA+SI V+RK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 139 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 321
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 177 bits (448), Expect = 6.410e-51 Identity = 98/185 (52.97%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-------------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGFD EVKVPETN K +NV+LLR FGA+SI VKRK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 251 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRK 435
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.480e-50 Identity = 101/185 (54.59%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-----------------------------------TA---------PNRVE----AFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F KKMILVLDNASYHHGFD EVKVPETN K +NV+LLRKFGA+SI VKRK+ TA P R+E FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 390 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 574
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.560e-50 Identity = 95/183 (51.91%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-----------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGFD +VK+PE+N K +NV+LLR FGA+SI VKRK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 86 QAKLAKGDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 268
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.710e-49 Identity = 97/185 (52.43%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-------------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGFD EVKVPETN K +NV+LLR FGA+SI V+RK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 356 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 540
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 172 bits (435), Expect = 6.810e-49 Identity = 95/185 (51.35%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-------------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGFD EVKVPE+N K +NV+LLR FGA+SI V+RK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS F+ RK
Sbjct: 239 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRK 423
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.640e-48 Identity = 91/185 (49.19%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKCFGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQTAP---------------------------------------------------NRVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGR 402
Q K + GDYH +MTD MFMEWLERRL PAFK +G+KKMILVLDNASYHHG+D EV VPE+N+K YN LLRK+ + I+V+R+ T+ +VE FM +G LIWTPPYMPSFQPI+LFW HGK YVSFNFKT R
Sbjct: 360 QAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKKYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKR 544
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 172 bits (437), Expect = 4.260e-48 Identity = 96/185 (51.89%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-------------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
Q KL+KGDYHA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGF EVKVPETN K +NV+LLR FGA+SI V+RK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 366 QAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 550
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 170 bits (431), Expect = 7.100e-48 Identity = 94/183 (51.37%), Postives = 108/183 (59.02%), Query Frame = 1
Query: 7 KLSKGDYHASMTDAMFMEWLERRLIPAFKKC--FGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ-------------TAPN-----------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGRK 405
K +KGD+HA+MTD+MFMEWLE RL PA+ F K+MILVLDNASYHHGFD EVKVPETN K +NV+LLR FGA+SI V+RK+ T P RV FM+ KG LIWTPPYMPSFQPI+LFW HGK YVS NF+ RK
Sbjct: 257 KFAKGDHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRK 439
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 169 bits (428), Expect = 7.290e-48 Identity = 89/179 (49.72%), Postives = 105/179 (58.66%), Query Frame = 1
Query: 1 QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKCFGDKKMILVLDNASYHHGFDEEVKVPETNNKNYNVELLRKFGAQSISVKRKQ---------------TAPN------------------------------RVEAFMQSKGSDLIWTPPYMPSFQPIKLFWPHGKAYVSFNFKTGR 402
Q KL+ GDYH +MTD MFM+WL+ RL PAF F +KKM LVLDNASYHH FDEEVKVPETN+K YNVELLRK+G S V R+ + PN + E +M+ KG LIWTPPYMP+FQPI+LFW HGK YVS +F+ GR
Sbjct: 205 QAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGR 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60819.13620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60819.13620.1 >prot_H-elongata_contig60819.13620.1 ID=prot_H-elongata_contig60819.13620.1|Name=mRNA_H-elongata_contig60819.13620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp QTKLSKGDYHASMTDAMFMEWLERRLIPAFKKCFGDKKMILVLDNASYHHback to top mRNA from alignment at H-elongata_contig60819:235..789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60819.13620.1 ID=mRNA_H-elongata_contig60819.13620.1|Name=mRNA_H-elongata_contig60819.13620.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=555bp|location=Sequence derived from alignment at H-elongata_contig60819:235..789- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60819:235..789- >mRNA_H-elongata_contig60819.13620.1 ID=mRNA_H-elongata_contig60819.13620.1|Name=mRNA_H-elongata_contig60819.13620.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig60819:235..789- (Himanthalia elongata Himel1 dioecious)back to top |