mRNA_H-elongata_contig60751.13613.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 252 bits (643), Expect = 3.300e-81 Identity = 120/202 (59.41%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
R GIKE++++PHVF RPEFLMI+GVY+ TY AN + TTCE +VD WP+ + TSAVN+ SC+AKD FTRMF + P +P STY LFT RD TV ASFN+P P S++LQ + GMSK AD TAQ+ACPAA+Q STPL+L+G+D+YNNP S+ R F+ S+YTSS+ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 208 bits (529), Expect = 1.280e-64 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
Query: 1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
++G + + LKPH F + +FL I+GVY TYVAAN I TTCE +++D T PK GT+A N+A C+ KD FTRMF TV P +Y LF ARD +TVAASFN P S YLQ+ +K TAD+ AQL CPA +Q STPL+LLG+D+YN N + R I EY S + R++R GPAFGIGGVGNT R
Sbjct: 25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLR 219
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 190 bits (483), Expect = 3.010e-57 Identity = 96/204 (47.06%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 7 GIKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
G+K++ + P F + EFL+I+G+Y+ TYV+AN I T CE ++ D+ PK IGT+AVN++ C+AKD F RMF + P P ++ LF RD +TVAASFN P +K L++ M A AQL CPAA+Q STPL+LLG+D+YNN S R F+ EY S+ R+ R GPAFGIGGVGNT FR + F
Sbjct: 58 GLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 192 bits (487), Expect = 3.360e-57 Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 1
Query: 1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGM--SKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
R+G++ ++++PH F P+F +I G+Y TY+ AN + TTCE + + + PK + T+ VN++ C+ KD FTRMF RP+P +TY LF +RD +TVAASFN P+ S L R G K++ADV AQLACPAA+Q STP++LLG+D+YN P S R + EY S I R++R GPAFGIGG+GN FR
Sbjct: 85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG) HSP 1 Score: 188 bits (478), Expect = 2.440e-56 Identity = 97/199 (48.74%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 4 EGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVD---DTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
+G + + +PH F ++ +I+G+Y TY+ ANM+ TTCE+ VD +W K + T+AVN++ C+ KD FTRMF +P+P +YL F RD MTVAASF P SK LQE+ S+ A V AQL+CPAA+Q FSTPL+LLG+D+YN P ++V R I S Y + + R +R GPAFGIGGVGNT FR Y
Sbjct: 70 QGFQTLFTQPHKFVGSIQYRLIFGLYFGTYMTANMVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEK-EWSEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 188 bits (477), Expect = 2.500e-56 Identity = 94/204 (46.08%), Postives = 126/204 (61.76%), Query Frame = 1
Query: 7 GIKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
GIKE+ + P F + EF++++G+Y TY +AN I T CE ++ D+ PK +GT+AVN+ C+AKD F +MF V P P LF RD +TV ASFN P +K L+ G+ A AQL CPAA+Q STPL+LLG+D+YNN +SV AR +F+ EY S + R+ R GPAFGIGGVGNT R+ + F
Sbjct: 59 GIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 187 bits (476), Expect = 5.640e-56 Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCE---RSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
++G + PH F + +F +++ +Y TY+ AN+I TT E R + K +GT+AVN+ +C+ KD FTRMF TV +P+P +YLLF +RD +T+ +SFN P SKY+Q E + S K +D AQLACPA MQ STPL+LLG+D+YNN NSS R I EY S++ RV+R PAFGIGGVGN R Y
Sbjct: 71 KQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 186 bits (473), Expect = 9.730e-56 Identity = 92/195 (47.18%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
RE + + P F + EF +I+G+Y TY+AAN+ T CE +++D+ PK I T+AVN++ C+AKD F RMF + P P ++ LF RD MT ASFN P +K ++++ M K A AQL CPAA+QL STPL+LLG+D+YNN +V R F+ EY S++ R+ R GPAFGIGGVGNT FR
Sbjct: 60 RELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFR 254
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 186 bits (471), Expect = 1.730e-55 Identity = 94/199 (47.24%), Postives = 125/199 (62.81%), Query Frame = 1
Query: 4 EGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDT---WPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
+G K +I +P F +F +++G+Y TY+ AN++ T E+ + T W K I TS +N+ C+ KD FTRMF R +P TYL F ARD MTVAASFN P + +LQE M ++ + VTAQLACPA +Q STP++LLG+D+YN PN++ R I EY S + RV R GPAFGIGGVGNT FR +
Sbjct: 56 QGFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 184 bits (468), Expect = 5.860e-55 Identity = 91/197 (46.19%), Postives = 125/197 (63.45%), Query Frame = 1
Query: 7 GIKEMILK----PHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
G+KE+ ++ P F + EF +I+G+Y TYV AN++ + CE ++ D+ PK IGT+AVN++ C+AKD F RMF + P P ++ LF RD MT ASFN P +K +++ M K A AQL CPAA+Q STPL+L+G+D+YNN ++ R F+ EY S+ RV R GPAFGIGGVGNT FR
Sbjct: 60 GLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFR 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60751.13613.1 >prot_H-elongata_contig60751.13613.1 ID=prot_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTback to top mRNA from alignment at H-elongata_contig60751:1481..2789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60751.13613.1 ID=mRNA_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1309bp|location=Sequence derived from alignment at H-elongata_contig60751:1481..2789- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60751:1481..2789- >mRNA_H-elongata_contig60751.13613.1 ID=mRNA_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig60751:1481..2789- (Himanthalia elongata Himel1 dioecious)back to top |