prot_H-elongata_contig60183.13554.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60183.13554.1
Unique Nameprot_H-elongata_contig60183.13554.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A6H5KV38_9PHAE (Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV38_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 6.010e-66
Identity = 119/190 (62.63%), Postives = 140/190 (73.68%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKT---GGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLV-----------------HADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIK 172
            K QATR+CEEVK S+DGWRLALE+FR T RPEARFF LGCLQDALGARAGA  RVE++HDR ++REAVMGWL     GGGAEL+AQE+FIRTK +   +  LL   DYPE WTDAF+QL+S+L +  G  +  G + V                 H +LYLRVLCALDEEVVSFHVDRS+EEA+HNS+IK
Sbjct:   27 KGQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESKHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAV--VLALLVKSDYPESWTDAFEQLRSVLVV--GSSNCSGDAAVXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIK 212          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 2.690e-62
Identity = 117/187 (62.57%), Postives = 136/187 (72.73%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKT---GGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGG--------------SLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIK 172
            K QATR+CEEVK S+DGWRLALE+FR T RPEARFF LGCLQDALGARAGA  RVE+QHDR ++REAVMGWL     GGGAEL+AQE+FIRTK +   +  LL   DYPE WTDAF+QL+S+L +                        +  H +LYLRVLCALDEEVVSFHVDRS+EEA+HNS+IK
Sbjct:   27 KAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAV--VLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIK 211          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.990e-34
Identity = 82/174 (47.13%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKTGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            + QA++FC+EVKAS +GW +AL++F TT RPEARF+AL  LQDALGAR GA+ R+     R+ +RE ++GWL T  G  L   E +I TK     LA+LL   D+PE W  AF QL +LL   P           H  L+LR L A+DE+VV F+  RS EE E N+++K   R
Sbjct:   33 RQQASQFCDEVKASPEGWVVALQLFSTTTRPEARFYALMVLQDALGARPGAACRLTDPEHRQRVRECLLGWL-TSPGVALADVEKYIVTKVGVV-LALLLRA-DFPERWPHAFTQLAALLPRGPA----------HVGLFLRFLGAVDEDVVRFNAQRSPEEVERNTLVKDAMR 193          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A5D6XP74_9STRA (Exportin-T n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP74_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.440e-20
Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKTGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            K QA RFC  VKAS DGWRLALE+F  +   E +F+AL  LQ+AL A+  A   V A+     +R A++ WL+    A +E +  +++TK +   +  LL   DYP  W  AF +L +LL         +G ++V  ++Y RVL A++EE+V F   RS  EA  N  IK   R
Sbjct:   32 KQQAERFCASVKASADGWRLALELFEFSEHEEVKFYALQALQEAL-AKGVADDAVAAR-----VRAALLAWLRENA-AFVERKAPYLKTKLAV--VVTLLIKRDYPARWPSAFAELLALLP--------QGAAMV--EMYFRVLVAINEEIVEFDAQRSPAEAAANMRIKDAMR 186          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A1Y1Z6C9_9FUNG (Exportin-T n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z6C9_9FUNG)

HSP 1 Score: 89.0 bits (219), Expect = 2.340e-17
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVF--RTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKTGG-GAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            K QAT++CE++K+S+DGW+L L +F     +  EAR F+L  ++D L  R        A + R+   E +      G      EA+  F++ K +++    LL +  YP  W   F     LL+      + R    V  D +LRVL A+DEEVV+  V R+KEEA  NS+IK   R
Sbjct:   21 KSQATQYCEQIKSSQDGWQLCLSLFVREPKSSSEARLFSLQVVEDVLQNRFSTLDASHALYIRQTFMEFINREYVAGNDNRSSEAEPVFLKNKLAHA--VTLLFINMYPTNWRTFFSDFILLLSANSANSNKRTNHKV-VDFFLRVLMAIDEEVVNVSVPRTKEEASRNSLIKDAMR 194          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A4P9XJE3_9FUNG (Exportin-T n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XJE3_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 2.360e-17
Identity = 57/178 (32.02%), Postives = 98/178 (55.06%), Query Frame = 0
Query:    4 PQATRFCEEVKASRDGWRLALEVFRTTARP--EARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLK----TGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVH---ADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIK 172
            PQAT +CE+++AS+DGW+L L +F    +   EAR F+L  +++ L +R        +Q   + LR+ ++G+L+       GA ++ +  F+R K +++   +LL V  Y + W   F+++  L        DG  G+++     D  LRV   +DEE VS  V RSK + +HN+++K
Sbjct:    4 PQATSYCEQLRASQDGWQLCLSLFARDPKSSQEARLFSLQVVEEVLASRFNEL----SQDQIQQLRQTLLGFLQREYVVNAGASIDNEPIFLRNKLAHT--VVLLFVRTYLKDWNAFFNEMLMLAAEASASSDG--GNMLQPRIVDFLLRVWMNIDEECVSMLVPRSKGDLDHNTLVK 173          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A397U4Y6_9GLOM (Exportin-T n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U4Y6_9GLOM)

HSP 1 Score: 87.0 bits (214), Expect = 1.100e-16
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTAR--PEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGW--LKTGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIK 172
            K QA  FCE+VKAS DGW+L L +F    +  PEAR FAL  + + L  + G+    +    R  L E V     L+   G E  ++  +++ K S++    LL V  YP +W + FD+  +LL +    G       +  D++LR+L ++DEEV +  V R KE+A+ N+ IK
Sbjct:   22 KSQAMNFCEQVKASPDGWQLCLLLFVRFPKSSPEARLFALQVVDEVL--KNGSLDTSQFLQIRSTLMEFVKREYVLEEVNGVEFSSEPQYLKNKFSHT--LTLLFVQLYPSLWPNFFDEFLALLQINAINGSKTNVRTI--DIFLRILLSIDEEVANLSVPRKKEDAQRNTAIK 189          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A261Y3G0_9FUNG (Exportin-T n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y3G0_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 3.470e-13
Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTAR--PEARFFALGCLQDALGARAGASVRVEAQHDRRM--LREAVMGWLKTGGGAELEAQES-----------FIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRP--GGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            K QA  +CE+VKAS DGW++ L++F    +  PEARFFAL  +++A+              D+R   L  + +G+L+ G    ++ + +           +IR K +++   +LL +  YPE W   FD   + L   P  GG      ++   D +LR+  +LDEE+    V R +E+   N+ IK   R
Sbjct:   21 KQQAGLYCEQVKASPDGWQVCLQLFVRDPKSTPEARFFALQVIEEAV--------------DKRFTSLDPSAVGYLQQGLMTYVKREYADIPNNPNLDIPYIRNKLAHA--IVLLFLNTYPETWASFFDDFLNTLASNPTNGGSPSSSTNIQAVDFFLRLNLSLDEEIARQDVPRGREQTLRNTQIKDAMR 195          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: F4QAN6_CAVFA (Exportin-T n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QAN6_CAVFA)

HSP 1 Score: 76.3 bits (186), Expect = 6.050e-13
Identity = 54/174 (31.03%), Postives = 85/174 (48.85%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKTGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            K +A ++   VK S +GW+  LE    T     +FF     QD +     AS+   ++ +R  L+  ++ W+K      L      +  K  Y+ + +LL   +YPE W + F++  SLL +         G +   D++LR+L A+DEEVVSF+V RS  E   N+ IK   R
Sbjct:   21 KQKALQYTNNVKESPEGWKFCLERLFKTNSVHVKFFCFHVFQDLI-LHKHASL---SEFERTKLKSTLIDWVKI----HLTKNTEELAIKNKYAQIVVLLFKQEYPEQWPNFFNEYLSLLQV---------GGVPAIDIFLRILKAIDEEVVSFNVHRSTTELAQNTQIKDSMR 177          
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Match: A0A8H8DI07_9FUNG (Exportin-T n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DI07_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 1.900e-12
Identity = 59/176 (33.52%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    3 KPQATRFCEEVKASRDGWRLALEVFRTTAR--PEARFFALGCLQDALGARAGASVRVEAQHDRRMLREAVMGWLKTGGGAELEAQESFIRTKASYSSLAMLLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALDEEVVSFHVDRSKEEAEHNSVIKVGYR 176
            K +AT +CE++K S DGW+L L +F    +  PEAR FAL  ++ ALG    A    + Q  R  L   V                 ++R K +++   + + +  YP  W   FD L +LL +   G  GR    +  D+YLR+L A+DEEVV+  V R K     N  IK   R
Sbjct:   21 KREATEYCEQLKISPDGWQLCLGLFARDPKSTPEARLFALQVVEHALGNFPPALNPQQLQFIRETLVNFVTREFFGTQNPSAPKDPPYLRNKLAHTLTLLFMHL--YPHSWPSFFDDLVALLDV---GLTGRTDEKL-VDIYLRILMAIDEEVVNLLVPREKGANVRNMNIKDAMR 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60183.13554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV38_9PHAE6.010e-6662.63Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FNT8_ECTSI2.690e-6262.57Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CAL0_9STRA3.990e-3447.13Exportin-T n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A5D6XP74_9STRA1.440e-2039.66Exportin-T n=1 Tax=Pythium brassicum TaxID=1485010... [more]
A0A1Y1Z6C9_9FUNG2.340e-1735.03Exportin-T n=1 Tax=Basidiobolus meristosporus CBS ... [more]
A0A4P9XJE3_9FUNG2.360e-1732.02Exportin-T n=1 Tax=Thamnocephalis sphaerospora Tax... [more]
A0A397U4Y6_9GLOM1.100e-1635.06Exportin-T n=2 Tax=Gigaspora TaxID=4873 RepID=A0A3... [more]
A0A261Y3G0_9FUNG3.470e-1330.37Exportin-T n=1 Tax=Bifiguratus adelaidae TaxID=193... [more]
F4QAN6_CAVFA6.050e-1331.03Exportin-T n=1 Tax=Cavenderia fasciculata (strain ... [more]
A0A8H8DI07_9FUNG1.900e-1233.52Exportin-T n=1 Tax=Olpidium bornovanus TaxID=27868... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013598Exportin-1/Importin-beta-likePFAMPF08389Xpo1coord: 88..172
e-value: 3.1E-8
score: 33.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..174
e-value: 4.1E-33
score: 116.1
IPR040017Exportin-TPANTHERPTHR15952EXPORTIN-T/LOS1coord: 2..172
NoneNo IPR availablePANTHERPTHR15952:SF11EXPORTIN-Tcoord: 2..172
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60183contigH-elongata_contig60183:563..1534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60183.13554.1mRNA_H-elongata_contig60183.13554.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60183 563..1534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60183.13554.1 ID=prot_H-elongata_contig60183.13554.1|Name=mRNA_H-elongata_contig60183.13554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
NSKPQATRFCEEVKASRDGWRLALEVFRTTARPEARFFALGCLQDALGAR
AGASVRVEAQHDRRMLREAVMGWLKTGGGAELEAQESFIRTKASYSSLAM
LLAVIDYPEIWTDAFDQLQSLLTLRPGGGDGRGGSLVHADLYLRVLCALD
EEVVSFHVDRSKEEAEHNSVIKVGYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013598Exportin-1/Importin-b-like
IPR011989ARM-like
IPR040017XPOT
IPR016024ARM-type_fold