prot_H-elongata_contig60167.13551.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60167.13551.1
Unique Nameprot_H-elongata_contig60167.13551.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length334
Homology
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BLAST of mRNA_H-elongata_contig60167.13551.1 vs. uniprot
Match: A0A6H5KKL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL5_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-6
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:  295 WPEYPWWPVFVDAIETALGSMALEELNDRMEV 326
            WPEYPWWPV  DAIETAL SM LEELN RM +
Sbjct: 1989 WPEYPWWPVLADAIETALRSMTLEELNSRMSM 2020
[Close]
BLAST of mRNA_H-elongata_contig60167.13551.1 vs. uniprot
Match: D7FUD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD9_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.170e-6
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:  295 WPEYPWWPVFVDAIETALGSMALEELNDRMEV 326
            WPEYPWWPV  DAIETAL SM LEELN RM +
Sbjct: 4039 WPEYPWWPVLADAIETALRSMTLEELNSRMSM 4070
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60167.13551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKL5_9PHAE1.120e-678.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD9_ECTSI1.170e-678.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60167contigH-elongata_contig60167:95..1950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60167.13551.1mRNA_H-elongata_contig60167.13551.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60167 95..1950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60167.13551.1 ID=prot_H-elongata_contig60167.13551.1|Name=mRNA_H-elongata_contig60167.13551.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp
DVLLSSPLLNAVKNEVNVDSNIGGGELDIMELSEEEGDKTAGVRGPIPSR
PKEDAAEAAEEGERDSIVNGLASANSNRHQETRLGESVGPIESGVLRLSS
SSLEARGDKTADVVGATICLRFLEDGVEAPEQGRVNNVANVLDRGDVCKI
RGRRPEDSEDTTSREALGLSSSSEYEKHDFEPMRLARPQNGPWMAQENQG
SERNAEAADSSTSISAATEEGSYGVRSGGNRGNKVDLRSESHCRGSGKGS
AWGADQLVKDQEGDSSHMEDNGRDREEEDGQEEDRSRHQKKKTRWPEYPW
WPVFVDAIETALGSMALEELNDRMEVKMILRDA*
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