mRNA_H-elongata_contig59534.13466.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59534.13466.1
Unique NamemRNA_H-elongata_contig59534.13466.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A6H5L1P3_9PHAE (Valine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1P3_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 1.430e-166
Identity = 238/301 (79.07%), Postives = 258/301 (85.71%), Query Frame = 1
Query:   16 QDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAF------RRAVWFISR-----------------QGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            QDILTRYHRMRGEPTLFLPGQDHAGIATQMLV +ALA EG+ RK+IGREAFLKKVW+WKE+KGGYIVRQMRRLGASADWSRERFTLDP+M+AAV EAF       RA+ F  R                  GL+YRGDYMVNWSPSLQTAVSDLEVEYSEE+GKLYYFKYMV+GG E E+LSVATTRPETILGDTAVCVHPED R+KHLVGGKVVVPLSGREIP+IAD+YVDMEFGTGALKITPGHDPNDYEIGKRHSL TI+LMEKDGTM   AGAYAGQDRFDCR+N+WAD++ A   L
Sbjct:  182 QDILTRYHRMRGEPTLFLPGQDHAGIATQMLVVKALAAEGIDRKEIGREAFLKKVWEWKEDKGGYIVRQMRRLGASADWSRERFTLDPEMSAAVTEAFVRLHEKARAMKFFPRCAPFECVHNFRGDGKAAGGLVYRGDYMVNWSPSLQTAVSDLEVEYSEEDGKLYYFKYMVAGGKEGEHLSVATTRPETILGDTAVCVHPEDERFKHLVGGKVVVPLSGREIPIIADDYVDMEFGTGALKITPGHDPNDYEIGKRHSLQTINLMEKDGTMAKTAGAYAGQDRFDCRNNMWADMEAAGLAL 482          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: D7FV40_ECTSI (Valine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV40_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 1.510e-165
Identity = 237/278 (85.25%), Postives = 257/278 (92.45%), Query Frame = 1
Query:   16 QDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            QDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALA EG+ RK+IGREAFLKKVW+WKE+KGGYIVRQMRRLGASADWSRERFTLDP+M+AAV EAF R    +  +GL+YRGDYMVNWSPSLQTAVSDLEVEYSEE+GKLYYFKYMV+GG E E+LSVATTRPETILGDTAVCVHPED R+KHLVGGKVVVPLSGREIP+IAD+YVDMEFGTGALKITPGHDPNDYEIGKRHSL TI+LMEKDGTM   AGAYAGQDRFDCR+N+WAD++ A   L
Sbjct:  182 QDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALAAEGIDRKEIGREAFLKKVWEWKEDKGGYIVRQMRRLGASADWSRERFTLDPEMSAAVTEAFVR----LHEKGLVYRGDYMVNWSPSLQTAVSDLEVEYSEEDGKLYYFKYMVAGGKEGEHLSVATTRPETILGDTAVCVHPEDERFKHLVGGKVVVPLSGREIPIIADDYVDMEFGTGALKITPGHDPNDYEIGKRHSLQTINLMEKDGTMAETAGAYAGQDRFDCRNNMWADMEAAGLAL 455          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A836CET5_9STRA (Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET5_9STRA)

HSP 1 Score: 429 bits (1104), Expect = 1.250e-140
Identity = 200/274 (72.99%), Postives = 233/274 (85.04%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADI 828
            +  QDI+TR+HRMRGEPTL++PG DHAGIATQMLVERAL  EGV R+++GRE FL++VW WKEEKGGYI+ QMR LGASADWSRERFTL+PDM+AAV EAF R    +  +GL+Y+GDYMVNWSPSLQTAVSDLEVEYSEE GKLYYF+Y V+G +E +++ VATTRPETILGDTAVCVHP+D RYKHL+G  VVVP  GREIPVIAD YVDMEFGTGALKITPGHD NDYEIGKRH+LP I+++ KD T+    G YAG DRF+CR  LW+D+
Sbjct:  144 VALQDIMTRFHRMRGEPTLWVPGTDHAGIATQMLVERALREEGVERRELGREKFLERVWQWKEEKGGYIINQMRSLGASADWSRERFTLEPDMSAAVVEAFVR----LHEKGLVYKGDYMVNWSPSLQTAVSDLEVEYSEEMGKLYYFQYRVAGASESDFIPVATTRPETILGDTAVCVHPDDERYKHLIGKSVVVPTQGREIPVIADTYVDMEFGTGALKITPGHDVNDYEIGKRHALPIINILNKDATINAAGGPYAGLDRFECRERLWSDM 413          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A7S0YX46_9CRYP (Valine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX46_9CRYP)

HSP 1 Score: 402 bits (1033), Expect = 1.120e-137
Identity = 191/267 (71.54%), Postives = 221/267 (82.77%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCR 807
            +  QDI+ R+HRMRG PTL+LPG DHAGIATQ+LVER+L  EG+SR DIGRE FL+KVWDWKEEKGGYI+ Q+RRLGASADWSRERFT+D  ++ A  EAF +    +  +GL+YRG+YMVNWSP+LQTAVSDLEVEYS+EEGKLYYFKY + G   +E+L VATTRPETILGDTAVCVHPED RYKHLVG  VVVP  GREIP+IAD+YVDMEFGTG LKITPGHDPNDYEIGKRH L TI++M +D T+    G Y G DRF+ R
Sbjct:  116 VALQDIMARFHRMRGRPTLWLPGTDHAGIATQLLVERSLNAEGISRYDIGREKFLEKVWDWKEEKGGYILSQLRRLGASADWSRERFTMDEGLSRATAEAFVQ----LHDKGLVYRGEYMVNWSPNLQTAVSDLEVEYSDEEGKLYYFKYPIKGS--DEHLEVATTRPETILGDTAVCVHPEDERYKHLVGKTVVVPTQGREIPIIADDYVDMEFGTGCLKITPGHDPNDYEIGKRHDLETINIMNRDATLNDACGKYEGMDRFEAR 376          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A7S3XNU9_HETAK (Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNU9_HETAK)

HSP 1 Score: 420 bits (1079), Expect = 5.400e-137
Identity = 202/284 (71.13%), Postives = 234/284 (82.39%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAE---EEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            +  QDIL R+HRM+G PTL+LPG DHAGIATQ+LVERALA EG SR+++GREAFL++VW WKEEKGG I  QMRRLGASADWSRERFTL+P+M+AAV EAF      +  +GL+Y+GDYMVNWSP LQTAVSDLEVEYSEEEGKLYYFKYM++  AE    ++L VATTRPETILGDTAVCVHPED RYKHL+G  VVVP  GREIP+IAD YVDMEFGTGALKITPGHDPNDYE+GK+H+LPTI++M +D ++    G YAG DR  CR  LWAD+  A  VL
Sbjct:  137 VALQDILARFHRMKGGPTLWLPGTDHAGIATQLLVERALAEEGTSRQELGREAFLERVWAWKEEKGGAITGQMRRLGASADWSRERFTLEPEMSAAVTEAFVT----LHERGLIYKGDYMVNWSPHLQTAVSDLEVEYSEEEGKLYYFKYMLADPAEGGGADHLPVATTRPETILGDTAVCVHPEDPRYKHLIGKTVVVPTQGREIPIIADEYVDMEFGTGALKITPGHDPNDYELGKKHALPTINIMNRDASINEAGGPYAGLDRIACRERLWADMGAAGLVL 416          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A7S4MJV7_9STRA (Valine--tRNA ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MJV7_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 1.800e-134
Identity = 192/282 (68.09%), Postives = 235/282 (83.33%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSG-REIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            +  QD L R+HRMRG P L+LPG DHAGIATQ+ VE+ L  EG +R+ +GRE FL++VW++KEE+GG+I RQ+R LGASADWSRERFT+DPD++ AV+EAF R    +  +GL+YRG+YMVNW+P LQTAVSDLEVEYSEEEGKLYYFKYMV GG EE+YL VATTRPETI+GDTAVCVHPED RYKHLVG + VVPLSG R IP+IAD+YVDMEFGTGALKITPGHDPNDY +GK++ LP +++M KDG+M  +AG+Y G DRF+CR  LW+D++    V+
Sbjct:  103 VALQDALARFHRMRGRPVLWLPGTDHAGIATQLQVEKQLIAEGTTREQVGREEFLRRVWEYKEEQGGHITRQLRSLGASADWSRERFTMDPDLSEAVSEAFVR----LHDKGLVYRGEYMVNWAPMLQTAVSDLEVEYSEEEGKLYYFKYMVDGGTEEDYLPVATTRPETIVGDTAVCVHPEDERYKHLVGKECVVPLSGGRTIPIIADDYVDMEFGTGALKITPGHDPNDYALGKKYDLPIVNVMNKDGSMNGNAGSYDGLDRFECREKLWSDMEGEGLVI 380          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A1Z5K4B9_FISSO (Valine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4B9_FISSO)

HSP 1 Score: 409 bits (1050), Expect = 1.650e-132
Identity = 191/282 (67.73%), Postives = 234/282 (82.98%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSG-REIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            +  QD+L R+HRMRG P L+LPG DHAGIATQ+ VE+ L  EG +R+++GRE FLK+VW++KEE+GG+I RQ+R LGASADWSRERFT+DP ++ AV EAF R    +  +GL+YRG+YMVNW+P L+TAVSDLEVEYSEE+GKLYYFKYMV G   EE+L VATTRPETI+GDTAVCVHPED RYKHLVG KVVVP+SG R IP+IAD YVDMEFGTGALKITPGHDPNDY +GK+  LP I++M +DG+M  +AG Y GQDRF+CR +LWAD+++   V+
Sbjct:  140 VALQDVLARFHRMRGRPVLWLPGTDHAGIATQLQVEKLLRAEGTTREEVGREEFLKRVWEYKEEQGGHITRQLRSLGASADWSRERFTMDPSLSEAVAEAFVR----LHEKGLVYRGEYMVNWAPQLKTAVSDLEVEYSEEQGKLYYFKYMVDGS--EEFLPVATTRPETIVGDTAVCVHPEDERYKHLVGKKVVVPMSGGRTIPIIADEYVDMEFGTGALKITPGHDPNDYTLGKKFDLPIINVMNRDGSMNANAGKYEGQDRFECRESLWADMEKEGLVI 415          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A7S2A8Z3_TRICV (Valine--tRNA ligase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z3_TRICV)

HSP 1 Score: 397 bits (1020), Expect = 2.570e-132
Identity = 184/272 (67.65%), Postives = 225/272 (82.72%), Query Frame = 1
Query:   37 HRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSG-REIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVL 849
            HRMRG P L+LPG DHAGIATQ+ VE+ L  EG SR+++GR+ FL + W +KEE+GG+I RQ+R LGASADWSRERFT+DP+++ AV+EAF R    +  +GL+YRG+YMVNW+P L+TAVSDLEVEYSEEEGKLYYFKYMV GG EE+YL VATTRPETI+GDTAVCVHPED R+KHL+G  VVVP+SG R IP+IAD YVDMEFGTGALKITPGHDPNDY +GK++ L  I++M KD TM  +AGAY G DRF+CR  LW+D+++   V+
Sbjct:    1 HRMRGRPVLWLPGTDHAGIATQLQVEKQLLAEGTSREEVGRDEFLSRTWTYKEEQGGHITRQLRSLGASADWSRERFTMDPELSDAVSEAFVR----LHEKGLVYRGEYMVNWAPLLKTAVSDLEVEYSEEEGKLYYFKYMVEGGGEEDYLPVATTRPETIVGDTAVCVHPEDERFKHLIGKSVVVPMSGGRAIPIIADEYVDMEFGTGALKITPGHDPNDYALGKKYDLEIINVMNKDATMNGNAGAYEGMDRFECREKLWSDMEKEGLVI 268          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: I2CQT9_NANGC (Valine--tRNA ligase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQT9_NANGC)

HSP 1 Score: 395 bits (1016), Expect = 1.090e-131
Identity = 186/277 (67.15%), Postives = 229/277 (82.67%), Query Frame = 1
Query:    7 ICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSE-EEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSG-REIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADID 831
            +  +DILTR+HRMRG PTL+LPG DHAGIATQMLVE+ALA EG+ R+++GRE F+ KVW+WK+EKGGYI +QMRRLGASADWSRE+FTLD D++ +V EAF      +   GL+YRGDY+VNWSPSLQTAVSDLEVEY E E+GKL++FKY V+    +++L VATTRPETILGDTAVCVHPED RY+HL+G  V+VP SG REIP+IAD YVD +FGTGALKITPGHDPNDYE+GKRH+LP I++M +D ++  + G Y G DRF+CR  LW D++
Sbjct:  199 VALEDILTRFHRMRGRPTLWLPGTDHAGIATQMLVEKALAVEGIKRQELGREGFVAKVWEWKKEKGGYITQQMRRLGASADWSREKFTLDEDLSKSVVEAFV----LLHEAGLIYRGDYLVNWSPSLQTAVSDLEVEYVEVEDGKLFFFKYPVANS--DDFLPVATTRPETILGDTAVCVHPEDPRYQHLIGKTVLVPRSGGREIPIIADTYVDRDFGTGALKITPGHDPNDYELGKRHNLPLINIMNRDASINANGGQYQGMDRFECREALWRDME 469          
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Match: A0A7R9YBQ2_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ2_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 3.270e-131
Identity = 192/285 (67.37%), Postives = 234/285 (82.11%), Query Frame = 1
Query:    1 LTICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKDIGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVNEAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYFKYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPLSGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKDGTMGTDAGAYAGQDRFDCRSNLWADI-DRAVSVLA 852
            L +  QDIL R+ RMRG PTL++PG DHAGIATQ+ VE+AL  EG SR +IGR+AFLK+VW+WKEEKGGYI++QM+RLGASADWSRERFTL+PDM+ AV EAF R    +  QGL+YRGDYMVNWSP+LQTA+SDLEVEY+EEEG+L+YF+Y ++ G+   +L VATTRPETILGDTAVCVHPED RYK  VG +V VP+S R IPVI D+YVDM+FGTGALKITPGHD NDYEIGKRH LPTI+++ KD ++  +AG YAG DRF+ R  LW D+ D  +++ A
Sbjct:   36 LFVALQDILARFWRMRGHPTLWVPGTDHAGIATQLQVEKALLAEGTSRVEIGRDAFLKRVWEWKEEKGGYILKQMQRLGASADWSRERFTLEPDMSDAVAEAFVR----LHEQGLVYRGDYMVNWSPNLQTAISDLEVEYAEEEGRLFYFRYDLADGS--GHLPVATTRPETILGDTAVCVHPEDDRYKSFVGKEVKVPMSDRTIPVITDDYVDMDFGTGALKITPGHDTNDYEIGKRHDLPTINILNKDASLNENAGPYAGLDRFEAREKLWQDMEDAGIAIKA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59534.13466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1P3_9PHAE1.430e-16679.07Valine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D7FV40_ECTSI1.510e-16585.25Valine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A836CET5_9STRA1.250e-14072.99Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S0YX46_9CRYP1.120e-13771.54Valine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis ... [more]
A0A7S3XNU9_HETAK5.400e-13771.13Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S4MJV7_9STRA1.800e-13468.09Valine--tRNA ligase n=1 Tax=Odontella aurita TaxID... [more]
A0A1Z5K4B9_FISSO1.650e-13267.73Valine--tRNA ligase n=2 Tax=Fistulifera solaris Ta... [more]
A0A7S2A8Z3_TRICV2.570e-13267.65Valine--tRNA ligase (Fragment) n=1 Tax=Trieres chi... [more]
I2CQT9_NANGC1.090e-13167.15Valine--tRNA ligase n=1 Tax=Nannochloropsis gadita... [more]
A0A7R9YBQ2_9STRA3.270e-13167.37Valine--tRNA ligase (Fragment) n=1 Tax=Pinguiococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59534contigH-elongata_contig59534:329..2800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.4
Seed ortholog evalue7e-137
Seed eggNOG ortholog2880.D7FV40
KEGG rclassRC00055,RC00523
KEGG koko:K01873
KEGG ReactionR03665
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.valyl-tRNA aminoacylation
EggNOG OGsCOG0525@1,KOG0432@2759
EC6.1.1.9
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categoryother localisation
Exons6
Model size855
Cds size855
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59534.13466.1prot_H-elongata_contig59534.13466.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59534 329..2800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930964.3620071-CDS-H-elongata_contig59534:328..5051622930964.3620071-CDS-H-elongata_contig59534:328..505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 329..505 +
1691679642.831366-CDS-H-elongata_contig59534:328..5051691679642.831366-CDS-H-elongata_contig59534:328..505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 329..505 +
1622930964.3999553-CDS-H-elongata_contig59534:1045..11771622930964.3999553-CDS-H-elongata_contig59534:1045..1177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1046..1177 +
1691679642.8445394-CDS-H-elongata_contig59534:1045..11771691679642.8445394-CDS-H-elongata_contig59534:1045..1177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1046..1177 +
1622930964.415562-CDS-H-elongata_contig59534:1474..16171622930964.415562-CDS-H-elongata_contig59534:1474..1617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1475..1617 +
1691679642.859872-CDS-H-elongata_contig59534:1474..16171691679642.859872-CDS-H-elongata_contig59534:1474..1617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1475..1617 +
1622930964.431642-CDS-H-elongata_contig59534:1998..20981622930964.431642-CDS-H-elongata_contig59534:1998..2098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1999..2098 +
1691679642.8774283-CDS-H-elongata_contig59534:1998..20981691679642.8774283-CDS-H-elongata_contig59534:1998..2098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 1999..2098 +
1622930964.449603-CDS-H-elongata_contig59534:2300..24271622930964.449603-CDS-H-elongata_contig59534:2300..2427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 2301..2427 +
1691679642.8879342-CDS-H-elongata_contig59534:2300..24271691679642.8879342-CDS-H-elongata_contig59534:2300..2427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 2301..2427 +
1622930964.4683528-CDS-H-elongata_contig59534:2624..28001622930964.4683528-CDS-H-elongata_contig59534:2624..2800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 2625..2800 +
1691679642.8986826-CDS-H-elongata_contig59534:2624..28001691679642.8986826-CDS-H-elongata_contig59534:2624..2800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59534 2625..2800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59534.13466.1

>prot_H-elongata_contig59534.13466.1 ID=prot_H-elongata_contig59534.13466.1|Name=mRNA_H-elongata_contig59534.13466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
LTICSQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALATEGVSRKD
IGREAFLKKVWDWKEEKGGYIVRQMRRLGASADWSRERFTLDPDMTAAVN
EAFRRAVWFISRQGLLYRGDYMVNWSPSLQTAVSDLEVEYSEEEGKLYYF
KYMVSGGAEEEYLSVATTRPETILGDTAVCVHPEDSRYKHLVGGKVVVPL
SGREIPVIADNYVDMEFGTGALKITPGHDPNDYEIGKRHSLPTISLMEKD
GTMGTDAGAYAGQDRFDCRSNLWADIDRAVSVLA*
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mRNA from alignment at H-elongata_contig59534:329..2800+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59534.13466.1 ID=mRNA_H-elongata_contig59534.13466.1|Name=mRNA_H-elongata_contig59534.13466.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2472bp|location=Sequence derived from alignment at H-elongata_contig59534:329..2800+ (Himanthalia elongata Himel1 dioecious)
CTTACTATCTGTTCGCAGGACATCCTGACGCGATATCACCGCATGCGTGG CGAGCCCACACTTTTTTTGCCGGGCCAAGATCACGCCGGTATTGCCACTC AGATGTTGGTGGAGAGGGCGCTCGCGACCGAGGGCGTAAGCCGGAAGGAC ATCGGAAGGGAGGCGTTCCTCAAGAAGGTGTCCGTGGATGAAGTCTAGAT CGCGTATTGCAGTGCCGTGACCCCTTAATGGAGCTGAAACAGCTTTTCGA TGATTGGACCCACCACCCTCTCCCTTCCCCTGTCGTGGAGGCCCTGTAGC ATGCAAGTCACCACGGAATCGTTGGTTGGAAAATAACAAAAAAGGTGCGG TAGCTATGTTTTGTGTTGTCTTTTCCTTATTATTGATACGTATTGCCGGT GTCTTCGCGATCGAGCTGCATCAAAGATCGAGGCCCGTGGCCTAAATACG CGCCGAGCCTTTGGGTGCCTGCCTATCGCCGTCCCACCAACATGGCGTCG TGTCGTTGGACGTTGGCTGTGGAAGCAGGCTAATGATATCGTTCCTTCTC GGCGATGCGAAGAACAAGTGCAAGAGCTAGGTTTTAGGGATCTCGTTCTC CGTACATAACAGGTCATAGTAGCTTGGCCCAGTTGCCTTCATTCTTTTAG TACTATATAACAAAGTCGGTTGTTTTTTTCTAATATTATACCTAATATTA CCCCCCCCCCCCATAAGGTCTGGGATTGGAAGGAAGAAAAAGGGGGCTAC ATAGTGCGCCAGATGCGGCGCCTGGGCGCTTCAGCAGATTGGTCTCGAGA ACGGTTCACGCTCGACCCAGATATGACCGCCGCCGTCAACGAGGCGTTTG TGCGACTCCACGAGAAGGCGAGCAAACTACAGTACTGTATGTACTACAAT ATATGTCTCCTCATCTCTTTCGCCTCCAATTCGTCGAAAACCAAAAATGA TCAGGACGTTGGATATGACCAAAATTGAACCACTTCTGGAGAACTCGGTG TATTTTTCCAATGCTCTTGAGAAGTTAAAAAAGAAAACGATTAAAAAAAG GGTTTGTATCTTGTTTTCACGCAATGACGCGTTAGCACTCTTTTAGTAGC CGTCCGGCTGGAGTTGAACGGAAGGAGGCATCACTGATTGGTCGAGCGGC GCGCTGTGTGGTTCATCTCCCGGCAGGGTTTGTTGTACCGTGGGGACTAT ATGGTGAACTGGAGCCCCTCCCTGCAGACGGCCGTGAGCGATCTTGAAGT GGAGTACTCCGAAGAAGAAGGGAAGCTCTACTACTTCAAGTGAGGACCGC GCACATAATCGATACAACTTTTGTTTGTTTGATTTTTTTTATAATCGAAA TGGCTTGAGTGCTGAACGAGGAATGCTACCGTAGAGTCGGTCGAGGTCGC AGTGGTGGTGGTGGTTTCTCTTGAATAAATTATAATGGAACTGTATCGTT CCATCCCGCGATATTTTGCACCCCACGAAAACCTTGCGGTGTTTCAGGAG CACCGATCTTGGTCTCTTGGAACGGGATCGTTCGATCACGCGATTTTTGC ACCAACTCCTTTAAAAAAAAAATGAACGAAGAGGCTCGTTTACTCCGTGC GTGAACAACGAGCTACTTACACTACCTAGTCGTTCTCGCTGAATCCTGTA GGGTACATGGTGTGCGACAGGTACATGGTGTCGGGAGGCGCCGAGGAGGA ATATTTGTCGGTGGCGACGACGAGACCCGAAACCATCCTGGGAGACACCG CCGTTTGCGTTCACCCCGAGGTGCGGGAGCAGTCGAACGAACGCCCGTCG AGGTTGTGTCAATACATTTATATACAAATCTTCATGCTAAAGGCTAAGGG CTTTTAATTCAAACGATCGAGGGAAGGAGAAAATGAATCCAGTATCCCGT GCCCAAAGGGTCATTACAAGAGTGTTTGACTGCTTTTTATCTCTTGTGCG TGATTCGTTCCTGCACGTCCAGGACTCTCGATACAAGCATCTGGTCGGCG GGAAGGTAGTGGTACCGCTATCCGGACGCGAGATCCCCGTCATCGCGGAT AACTACGTCGACATGGAATTCGGCACGGGCGCGCTCAAGATTACCCCGGG TGAGACATATCCCTCCTCCCCCCCTCTCTGTCTATCCCTGGTTGATTGTC GTTTTCTTGGAAGCGTCCGGCGAATGAGCTACGCGAGCCGTGTTAAGCGC CAATCCTTCTTTGTTTCCGATAGTGCGTTTCTTTGTTTCGTGTTACGGCT GTGGTTACTCATCTCAGCATCGGGTCGCGGTATTTCCTCCCCTCAGGCCA CGACCCCAACGACTACGAAATCGGGAAGCGGCACTCACTGCCGACGATAA GTCTGATGGAGAAGGACGGGACCATGGGGACCGACGCGGGTGCCTACGCG GGACAAGACCGCTTCGACTGCAGGAGTAACCTTTGGGCAGACATCGATCG AGCGGTGAGTGTCTTGGCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig59534:329..2800+

>mRNA_H-elongata_contig59534.13466.1 ID=mRNA_H-elongata_contig59534.13466.1|Name=mRNA_H-elongata_contig59534.13466.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig59534:329..2800+ (Himanthalia elongata Himel1 dioecious)
CTTACTATCTGTTCGCAGGACATCCTGACGCGATATCACCGCATGCGTGG
CGAGCCCACACTTTTTTTGCCGGGCCAAGATCACGCCGGTATTGCCACTC
AGATGTTGGTGGAGAGGGCGCTCGCGACCGAGGGCGTAAGCCGGAAGGAC
ATCGGAAGGGAGGCGTTCCTCAAGAAGCTTACTATCTGTTCGCAGGACAT
CCTGACGCGATATCACCGCATGCGTGGCGAGCCCACACTTTTTTTGCCGG
GCCAAGATCACGCCGGTATTGCCACTCAGATGTTGGTGGAGAGGGCGCTC
GCGACCGAGGGCGTAAGCCGGAAGGACATCGGAAGGGAGGCGTTCCTCAA
GAAGGTCTGGGATTGGAAGGAAGAAAAAGGGGGCTACATAGTGCGCCAGA
TGCGGCGCCTGGGCGCTTCAGCAGATTGGTCTCGAGAACGGTTCACGCTC
GACCCAGATATGACCGCCGCCGTCAACGAGGCGTTTGTCTGGGATTGGAA
GGAAGAAAAAGGGGGCTACATAGTGCGCCAGATGCGGCGCCTGGGCGCTT
CAGCAGATTGGTCTCGAGAACGGTTCACGCTCGACCCAGATATGACCGCC
GCCGTCAACGAGGCGTTTCGGCGCGCTGTGTGGTTCATCTCCCGGCAGGG
TTTGTTGTACCGTGGGGACTATATGGTGAACTGGAGCCCCTCCCTGCAGA
CGGCCGTGAGCGATCTTGAAGTGGAGTACTCCGAAGAAGAAGGGAAGCTC
TACTACTTCAACGGCGCGCTGTGTGGTTCATCTCCCGGCAGGGTTTGTTG
TACCGTGGGGACTATATGGTGAACTGGAGCCCCTCCCTGCAGACGGCCGT
GAGCGATCTTGAAGTGGAGTACTCCGAAGAAGAAGGGAAGCTCTACTACT
TCAAGTACATGGTGTCGGGAGGCGCCGAGGAGGAATATTTGTCGGTGGCG
ACGACGAGACCCGAAACCATCCTGGGAGACACCGCCGTTTGCGTTCACCC
CGAGGTACATGGTGTCGGGAGGCGCCGAGGAGGAATATTTGTCGGTGGCG
ACGACGAGACCCGAAACCATCCTGGGAGACACCGCCGTTTGCGTTCACCC
CGAGGACTCTCGATACAAGCATCTGGTCGGCGGGAAGGTAGTGGTACCGC
TATCCGGACGCGAGATCCCCGTCATCGCGGATAACTACGTCGACATGGAA
TTCGGCACGGGCGCGCTCAAGATTACCCCGGGACTCTCGATACAAGCATC
TGGTCGGCGGGAAGGTAGTGGTACCGCTATCCGGACGCGAGATCCCCGTC
ATCGCGGATAACTACGTCGACATGGAATTCGGCACGGGCGCGCTCAAGAT
TACCCCGGGCCACGACCCCAACGACTACGAAATCGGGAAGCGGCACTCAC
TGCCGACGATAAGTCTGATGGAGAAGGACGGGACCATGGGGACCGACGCG
GGTGCCTACGCGGGACAAGACCGCTTCGACTGCAGGAGTAACCTTTGGGC
AGACATCGATCGAGCGGTGAGTGTCTTGGCTTGAGCCACGACCCCAACGA
CTACGAAATCGGGAAGCGGCACTCACTGCCGACGATAAGTCTGATGGAGA
AGGACGGGACCATGGGGACCGACGCGGGTGCCTACGCGGGACAAGACCGC
TTCGACTGCAGGAGTAACCTTTGGGCAGACATCGATCGAGCGGTGAGTGT
CTTGGCTTGA
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