prot_H-elongata_contig58874.13389.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58874.13389.1
Unique Nameprot_H-elongata_contig58874.13389.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length225
Homology
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 1.440e-93
Identity = 162/227 (71.37%), Postives = 176/227 (77.53%), Query Frame = 0
Query:    1 MTTFLECHYLTTIHSTIVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRP--TLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGDHRYSDYQEVRL 225
            MTTFLE  YL TIH TIVSA+DQEKDYAL VNAQDLIHFDSRL YLVL RPDLLLELM EALGEVQ+RIVA+  EA              SG  P  T+K NAHIRITHLPP+SDLCKPNIS+IRGTDLG LIQIQ               GTVIR+GA KMLEVSREYRCQNKTCGA+FSVHSDMSQGNLL+ PTSCPGV +K CK TRF EHGDH+YSDYQE+++
Sbjct:    1 MTTFLERRYLATIHRTIVSAQDQEKDYALAVNAQDLIHFDSRLAYLVLHRPDLLLELMREALGEVQARIVAE--EAXXXXXXXXXXXXXDSGRTPVLTVKGNAHIRITHLPPLSDLCKPNISAIRGTDLGVLIQIQ---------------GTVIRSGAAKMLEVSREYRCQNKTCGAVFSVHSDMSQGNLLAPPTSCPGVGEKQCKGTRFMEHGDHKYSDYQEMKV 210          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 161 bits (407), Expect = 7.510e-42
Identity = 106/248 (42.74%), Postives = 129/248 (52.02%), Query Frame = 0
Query:   33 AQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTE--PPPPRSGV---------RPTL--KANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIA----------VDGTVIRTGAVKMLEVSREYRCQNK-----------------------------TCGAIFSVHSDMSQGNLLSQPTSCPG---VRDKLCKSTRFAEHGDHRYSDYQEVRL 225
            AQD+IH D ++ YL+L     L  L+ EAL EVQ  + +DA    G  LP     PPPP  G           P L  K NAH+R+ HLP +SDLCKPN+SSIR TDL  +IQ+Q         D I           + GTVIRTG VKMLEV+R+Y+CQNK                             TCG  F V  DMSQGN+L  P SCPG        CKS+RF E+G H YSDYQE+++
Sbjct:  103 AQDVIHEDPQVAYLLLHHYHPLFPLLDEALSEVQHEL-SDAMSPRGA-LPRRPHAPPPPHDGALLHEAPPHDAPPLSVKRNAHVRLAHLPSVSDLCKPNVSSIRNTDLNRVIQVQPILYMSTPADVIVCHKMRLLIYRIQGTVIRTGMVKMLEVTRQYQCQNKGADSVLLRKVLLIAQRRLICSYLLRSAWQTCGHTFEVACDMSQGNMLVPPRSCPGRGAPGSGGCKSSRFQEYGAHHYSDYQEIKV 348          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: D7G551_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G551_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.220e-36
Identity = 76/135 (56.30%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   91 SGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGDHRYSDYQEVRL 225
            S VRP       +R     P SD  +     +     GSLI+  +       GD     GTVIR+GA KMLEVSREYRCQNKTCGA+FSVHSDMSQGNLL+ PTSCPGV +K CK TRF EHGDH+YSDYQE+++
Sbjct:   30 SAVRP----GERLRARSQRPRSDPLRLAACLLGAAPSGSLIRDSLIYLARAAGDA---QGTVIRSGAAKMLEVSREYRCQNKTCGAVFSVHSDMSQGNLLAPPTSCPGVGEKQCKGTRFMEHGDHKYSDYQEMKV 157          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A6H5JSZ1_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ1_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.910e-36
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
Query:  150 GTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGDHRYSDYQE 222
            GTVIR+GA KMLEVSREYRCQNKTCGA+FSVHSDMSQGNLL+ PTSCPGV  K CK TRF EHGDH+YSDYQE
Sbjct:   39 GTVIRSGAAKMLEVSREYRCQNKTCGAVFSVHSDMSQGNLLAPPTSCPGVGQKQCKGTRFMEHGDHKYSDYQE 111          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A7S2WCY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCY2_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.930e-34
Identity = 83/212 (39.15%), Postives = 121/212 (57.08%), Query Frame = 0
Query:   17 IVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADA--KEAEGVHLPNTEPPPPRSGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGV-RDKLCKSTRFAEHGDHRYSDYQEVRL 225
            +VS+   E  ++  VNA + I +  R   +VLR PD+LL+L  +AL + Q  ++A+A  ++     L    P     G+  ++K N  +R THLP + + CKPN+SSIR +D+G L+QI                GTVIRT  VKMLE  REY+C +  CG  F  ++DM QGN+L +P  CP V R+  CK T+F   G  R +DYQE+++
Sbjct:   65 LVSSPHTELHFSFLVNAHEFIDYAPRKALMVLRYPDILLDLCDQALIQSQEALLANAGMQQEHQDRLARGAP-----GL--SVKQNVTVRFTHLPAIPEFCKPNVSSIRASDVGGLVQIC---------------GTVIRTSTVKMLEYMREYKCSSSRCGHTFVTYADMEQGNVLEEPRLCPMVGRNPPCKCTKFDTIGS-RCTDYQEIKI 253          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: W7TSH5_9STRA (Dna replication licensing factor mcm9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSH5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.080e-28
Identity = 72/210 (34.29%), Postives = 117/210 (55.71%), Query Frame = 0
Query:   17 IVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGD-HRYSDYQEVRL 225
            ++  +D+   ++  VNAQD+I F+  +GYL++  P +LL +  EA+  VQ  ++   +  + V  P+      RS    ++K + H+RI H+PP+ +L K ++S IR  D+G LIQ               V GTV+R GAVKML  SRE+ C+N  C   F V++D  QG ++  P +CP    + C+S+ F E  +    +DYQE+++
Sbjct:   67 LLHRDDEMGHHSFVVNAQDIIAFNPMVGYLLMYNPMVLLPIFEEAVLRVQMTLLKTLEAKDRVDQPDNATQQLRS--HRSVKGHVHVRIFHIPPIPELYKSSLSDIRAHDVGRLIQ---------------VIGTVVRLGAVKMLNASREFTCRNGKCRHRFRVYADFEQGYVMQAPQACP----RECRSSEFEEAPEADECTDYQEIKI 255          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: F0XWD1_AURAN (MCM domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWD1_AURAN)

HSP 1 Score: 117 bits (292), Expect = 1.730e-26
Identity = 76/210 (36.19%), Postives = 111/210 (52.86%), Query Frame = 0
Query:   17 IVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRD-KLCKSTRFAEHGDHRYSDYQEVRL 225
            +V+ +D        V+  D++  D+ L    LR P +++ ++ +AL E Q R++A A  A             R   RP  +A A +R   +PP+ +  K N+SS+R +D+G L+Q               V GTV+R GAVK++E  R Y+C   +CGA F+V++D  QGNLL +PT CPG      C S RF E G    +DYQEVRL
Sbjct:   68 LVARDDAAGVVGFDVDCVDVVAHDAELLACTLRHPKVMVPVLDDALAEAQDRLLASASAAG------------RDDWRPR-RAKARLRC--VPPLPEHWKANVSSLRASDVGKLVQ---------------VCGTVVRAGAVKIIESCRTYQCGAASCGATFAVYADREQGNLLEKPTRCPGANGCGGCSSRRFVEVGREN-ADYQEVRL 246          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A4D9DH93_9STRA (MCM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DH93_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.230e-22
Identity = 64/184 (34.78%), Postives = 101/184 (54.89%), Query Frame = 0
Query:   43 LGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGD-HRYSDYQEVRL 225
            +GYL++  P +LL +  EA+  VQ  ++   +  + V  P+      RS    ++K + H+RI H+PP+ +L K ++S IR  D+G LIQ               V GTV+R GAVKML  SRE+ C+N  C   F V++D  QG ++  P +CP    + C+S+ F E  +    +DYQE+++
Sbjct:    2 VGYLLMYNPMVLLPIFEEAVLRVQMTLLKTLEAKDRVDQPDNATQQLRS--HRSVKGHVHVRIFHIPPIPELYKSSLSDIRAHDVGRLIQ---------------VIGTVVRLGAVKMLNASREFTCRNGKCRHRFRVYADFEQGYVMQAPQACP----RECRSSEFEEAPEADECTDYQEIKI 164          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A7S3ZT70_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT70_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.720e-21
Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 0
Query:   17 IVSAEDQEKD---YALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRPTLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCKSTRFAEHGDHRYSDYQEVRL 225
            +VS ED   D     + V+  +L  FD+     +LR P+ LL +  EAL +    +++    +                     +  A  R+ H PP+S   KPN+S++R  D+G L+QI+               GTV+RTGAV++LE  R YRC ++ C  +F V  D +QGN+   P  CPG +D  C S RF E  +   +DYQE+R+
Sbjct:   87 VVSGEDAAGDARGVGVPVDLCELARFDAGAAQGLLRWPEKLLPVFDEALNDGVKALLSSQTASRHPDW---------------RERKARARLRHCPPLSAHRKPNVSALRCGDVGPLVQIE---------------GTVVRTGAVRVLEAQRWYRCLDQRCEHVFPVKPDAAQGNVFEAPKRCPG-QDGSCGSRRFVEV-ERENADYQELRV 266          
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Match: A0A5A8DW00_CAFRO (MCM domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DW00_CAFRO)

HSP 1 Score: 96.3 bits (238), Expect = 2.710e-19
Identity = 70/220 (31.82%), Postives = 105/220 (47.73%), Query Frame = 0
Query:   17 IVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRRPDLLLELMCEALGEVQSRIVADAKEAE----GVHLPNTEPPPPRSGVRP-----TLKANAHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDGTVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVRDKLCK--STRFAEHGDHRYSDYQEVRL 225
            I+   D  + Y L V   D++     +   + ++  ++L  + EA+GE Q R++  A E +    G  L          GV       + K + H R++HLP + +  KPN+SSIR TD+GS +Q               V GTVIRTGA ++LE  R+Y+C +  C   F+V S +  G+    P  CP      CK  S R  E    R +DYQEV++
Sbjct:   33 ILREPDDAQHYGLEVWLSDVLDVVPEISEELGQQSSVVLLKLDEAIGEAQRRLMTAADEDDEAEVGGGLDARSVAASAVGVGEGARGLSFKPHVHARLSHLPGVPEYSKPNVSSIRATDIGSFVQ---------------VPGTVIRTGATRVLEAERQYQCSSAKCNFTFTVRSTVESGHTAEVPAICPSPSG-TCKGRSFRLIEESVVR-TDYQEVKI 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58874.13389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM73_ECTSI1.440e-9371.37MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z090_9STRA7.510e-4242.74MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
D7G551_ECTSI2.220e-3656.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSZ1_9PHAE3.910e-3684.93MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2WCY2_9STRA7.930e-3439.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TSH5_9STRA2.080e-2834.29Dna replication licensing factor mcm9 n=1 Tax=Nann... [more]
F0XWD1_AURAN1.730e-2636.19MCM domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A4D9DH93_9STRA1.230e-2234.78MCM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S3ZT70_9STRA3.720e-2132.55Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A5A8DW00_CAFRO2.710e-1931.82MCM domain-containing protein n=1 Tax=Cafeteria ro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 146..225
e-value: 3.3E-12
score: 48.2
NoneNo IPR availableGENE3D2.20.28.10coord: 164..214
e-value: 3.3E-12
score: 48.2
NoneNo IPR availablePANTHERPTHR11630:SF48DNA HELICASE MCM9coord: 4..225
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTORcoord: 4..225
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58874contigH-elongata_contig58874:323..3329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58874.13389.1mRNA_H-elongata_contig58874.13389.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58874 302..3329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58874.13389.1 ID=prot_H-elongata_contig58874.13389.1|Name=mRNA_H-elongata_contig58874.13389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
MTTFLECHYLTTIHSTIVSAEDQEKDYALTVNAQDLIHFDSRLGYLVLRR
PDLLLELMCEALGEVQSRIVADAKEAEGVHLPNTEPPPPRSGVRPTLKAN
AHIRITHLPPMSDLCKPNISSIRGTDLGSLIQIQVRSKRELRGDGIAVDG
TVIRTGAVKMLEVSREYRCQNKTCGAIFSVHSDMSQGNLLSQPTSCPGVR
DKLCKSTRFAEHGDHRYSDYQEVRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031327MCM
IPR012340NA-bd_OB-fold