prot_H-elongata_contig11706.1331.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11706.1331.1
Unique Nameprot_H-elongata_contig11706.1331.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length912
Homology
[Close]
BLAST of mRNA_H-elongata_contig11706.1331.1 vs. uniprot
Match: A0A6H5K0S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0S9_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 4.720e-8
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 0 
Query:  698 ALLLSGERKTGLAALEHQGPTAKAARRALLEESKQRRSAEIKPRLNIFETLRQRSAASSHAAERTSS 764
            A LLSGERKTGLAAL  +G  AK ARRALL E+ Q+R++E KPR  IFETLRQRS  S + AE TSS
Sbjct: 1500 ASLLSGERKTGLAALGSKGTPAKTARRALLHETMQKRTSESKPRQGIFETLRQRS--SGNMAESTSS 1564
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11706.1331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0S9_9PHAE4.720e-867.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 902..911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11706contigH-elongata_contig11706:260..5560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11706.1331.1mRNA_H-elongata_contig11706.1331.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11706 176..6184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11706.1331.1 ID=prot_H-elongata_contig11706.1331.1|Name=mRNA_H-elongata_contig11706.1331.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=912bp
MAALRAQKHQQERQQHHQQRYPWVGKVAPGVEWFPAEDETSTALATDASN
EKSSSGERLPPMPAWMINKGMGGGARTLRNRPGVLLGRPRPAHGRILRGG
GEVGPGVGGSGSSSLPSGLAFKQQPFSPTAVAVVAPHTSEAWDGAALCVG
DDHCDRQEGCSLSTGAVSTRDAGNALEDRGQSRPDKPPDETSTATTAALA
AVAAAMAVTFGVDGSSGPLVLTREESAGCDSAVSSEVATPYAGKTSSPRS
GGGGAAVFPPNEVSPTEAMDAMDISDDSRSTLSEEASTAAASTVGAEVEE
ESVKDPLVIAAVDSRAKLIDEEDGEPLETPSSPGASGGFAALGRFLFGDH
PGSQRAQIAPGEEVELRGKLRRESSSSVAFDNVERVEAQILLSVRSMDDY
DGEGDTDGYGEGGGIASSVDLVSVYGVASRVSGEESLSTVSPERVGSSSS
DCTTAPNSSADGDGNHDGNDDADGEASEADMRSAGGVSLASTKAPRLAPR
SILAAVPPGAADEKAWAREWKSTGEDSINPFNDVALPPSLVEVPSPAVSG
SFGEENAERTVTEATAKEASESQVSLLHNAQMIAPSVSVVAADGLDGGGC
AVAAEMRAEANVADVATAQGFDVSRPGAGEQGVGEGPVATAVATTTRMSM
ASSSSGDVSWMRNSGRMRSRSSTRGVGYASSPSSTSGDGPTTTFDRTALL
LSGERKTGLAALEHQGPTAKAARRALLEESKQRRSAEIKPRLNIFETLRQ
RSAASSHAAERTSSATRRQRYTVTRSVSERPTRAPSPRQRYPATRGISER
LIRAPSPRRPHQTFGTNSAPPSRRVTVASASDPPKRSSNAVEGHKAMAVE
NGVVSAATGEGVGGLTIDALEEVADDQVEPASSGEDEEPDFWSMYGVIDT
AALEEDADIEI*
back to top