prot_H-elongata_contig58191.13299.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58191.13299.1
Unique Nameprot_H-elongata_contig58191.13299.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length223
Homology
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BLAST of mRNA_H-elongata_contig58191.13299.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.160e-79
Identity = 141/220 (64.09%), Postives = 172/220 (78.18%), Query Frame = 0 
Query:    1 MTFRAMAEESSKLERIPLLERGAEAFSRCVQIREKTLTNNHPDLQLARSRLAMIQSLLGG-EKEETEAKLRAALDGLQMAVGDDNASTANAMTNLALFLKGEGQYEEATNLFTAALDTRLELYGPKHVDALVSMHNLSMVHHAAGREDEAVELQEEIARIGEELGMTEEERVEAGDVSTERMNEDLDVTREDGKR-PGKEIDQKQEEGNNVGDSTTTWRP 218
            M FRAMAE+S KLE+IPL+ER AE+F RCVQIREK LTNNHPDLQLARSRLA +Q +LGG EKE TEA+LRAALDGLQMAVG+D+ASTANA TNLALFLKGEG+  EAT+L+T  L+TR +LYG KH D LVSMHNLSM HH AGREDEA++L++EIA+IGEE+GMT EE+ EA   +   +     + +E+GK+ P K+ +          DS +TW+P
Sbjct:  227 MLFRAMAEDSKKLEKIPLMERAAESFERCVQIREKILTNNHPDLQLARSRLATVQDMLGGGEKEGTEARLRAALDGLQMAVGNDDASTANAKTNLALFLKGEGKLAEATDLYTDVLETRKKLYGRKHFDVLVSMHNLSMTHHVAGREDEAIKLRDEIAKIGEEMGMTPEEQSEASGAAGGAVK----LAQEEGKKAPEKKKN----------DSGSTWKP 432
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58191.13299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKH6_ECTSI2.160e-7964.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..169
NoneNo IPR availablePFAMPF13424TPR_12coord: 87..159
e-value: 1.9E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR46082FAMILY NOT NAMEDcoord: 15..161
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..209
e-value: 2.1E-28
score: 101.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 40..163
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 88..163
score: 8.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58191contigH-elongata_contig58191:758..2738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58191.13299.1mRNA_H-elongata_contig58191.13299.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58191 61..2806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58191.13299.1 ID=prot_H-elongata_contig58191.13299.1|Name=mRNA_H-elongata_contig58191.13299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
MTFRAMAEESSKLERIPLLERGAEAFSRCVQIREKTLTNNHPDLQLARSR
LAMIQSLLGGEKEETEAKLRAALDGLQMAVGDDNASTANAMTNLALFLKG
EGQYEEATNLFTAALDTRLELYGPKHVDALVSMHNLSMVHHAAGREDEAV
ELQEEIARIGEELGMTEEERVEAGDVSTERMNEDLDVTREDGKRPGKEID
QKQEEGNNVGDSTTTWRPGQNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom