mRNA_H-elongata_contig5801.13274.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435) HSP 1 Score: 230 bits (586), Expect = 2.570e-67 Identity = 138/358 (38.55%), Postives = 204/358 (56.98%), Query Frame = 1
Query: 19 LDIQEPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGA--VGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDV---KKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
LD EP N +AM SP+ W +A K EM M +N V V P D+ + K ++K++ DG V YK RLVA+GF Q++G+ Y E +SP S+R++LA AA D E+ D K AFL ++EELY+ PE + GA V +L ++IYGLVQA R W KRF S + A GF Q + C+++KV G + ++++VDDIL D +D L + F +KD+G+A Y +G I R+R R + + Q Y++ +++KF + KKG +P GV LSK P E++EK++ PY A+G++++ TRPD+ A+ R+ NP H AV I++YL T
Sbjct: 3 LDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGFIQTFGEACIYKKV-SGSSVAFLILYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKVLKKFKMDQAKKGF-LPVLQGV-KLSKTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRYQSNPGVDHWTAVKNILKYLKRT 357
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D) HSP 1 Score: 222 bits (566), Expect = 2.720e-64 Identity = 135/358 (37.71%), Postives = 200/358 (55.87%), Query Frame = 1
Query: 19 LDIQEPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDV---KKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
LD EP N +AM P+ N W +A K E+ M +N V P D+ + K ++K++ DG V YK RLVA+G+ Q++GV Y E +SP S+R++LA AA D E+ D K AFL + EELY+ PE + K V +L ++IYGLVQA R W RF + A GF Q + CV++KV G + ++++VDDIL D +D A L + F +KD+G+A Y +G I R+R R + + Q Y++ +++KF + KKG +P GV LS A P ++KE++ PY A+G++++ TRPD+ AV + R+ NP H AV I++YL T
Sbjct: 11 LDNGEPSNYEEAMAGPDSNKWLEAMKSEIESMYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFKMDQSKKGF-LPVLQGV-RLSSAQCPTTAKDKEEMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNILKYLKRT 365
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 224 bits (571), Expect = 6.960e-62 Identity = 122/310 (39.35%), Postives = 185/310 (59.68%), Query Frame = 1
Query: 148 PKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
P+ + V K + + ++GK++ +K RLVA+GF QI V Y SP PS+ASI+++LA A K L H+D KQA+ A +DEE+++++P + + +AIYGL Q+GR W + GF+Q KADPCVFRK+VD +++V++VDDIL D + A L +KF K++G+ +++ GC I R+ + L+I Q Y++SMVE+FDVK +IPAT G K E E+ ++P REA+G+++W + +RPD++ AVRA+AR PA H A+ KI+ YL T
Sbjct: 776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGT 1077
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 224 bits (571), Expect = 8.080e-62 Identity = 122/310 (39.35%), Postives = 185/310 (59.68%), Query Frame = 1
Query: 148 PKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
P+ + V K + + ++GK++ +K RLVA+GF QI V Y SP PS+ASI+++LA A K L H+D KQA+ A +DEE+++++P + + +AIYGL Q+GR W + GF+Q KADPCVFRK+VD +++V++VDDIL D + A L +KF K++G+ +++ GC I R+ + L+I Q Y++SMVE+FDVK +IPAT G K E E+ ++P REA+G+++W + +RPD++ AVRA+AR PA H A+ KI+ YL T
Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGT 1456
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 224 bits (571), Expect = 8.150e-62 Identity = 122/310 (39.35%), Postives = 185/310 (59.68%), Query Frame = 1
Query: 148 PKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
P+ + V K + + ++GK++ +K RLVA+GF QI V Y SP PS+ASI+++LA A K L H+D KQA+ A +DEE+++++P + + +AIYGL Q+GR W + GF+Q KADPCVFRK+VD +++V++VDDIL D + A L +KF K++G+ +++ GC I R+ + L+I Q Y++SMVE+FDVK +IPAT G K E E+ ++P REA+G+++W + +RPD++ AVRA+AR PA H A+ KI+ YL T
Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGT 1476
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 224 bits (571), Expect = 8.240e-62 Identity = 122/310 (39.35%), Postives = 185/310 (59.68%), Query Frame = 1
Query: 148 PKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
P+ + V K + + ++GK++ +K RLVA+GF QI V Y SP PS+ASI+++LA A K L H+D KQA+ A +DEE+++++P + + +AIYGL Q+GR W + GF+Q KADPCVFRK+VD +++V++VDDIL D + A L +KF K++G+ +++ GC I R+ + L+I Q Y++SMVE+FDVK +IPAT G K E E+ ++P REA+G+++W + +RPD++ AVRA+AR PA H A+ KI+ YL T
Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGT 1619
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.040e-61 Identity = 120/310 (38.71%), Postives = 186/310 (60.00%), Query Frame = 1
Query: 148 PKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
P+ + V K + + ++GK++ +K RLVA+GF QI V Y SP PS+ASI+++LA A K L H+D KQA+ A +DEE+++++P + + +AIYGL Q+GR W + GF+Q KADPCVFRK+VD +++V++VDDIL D + A L +KF K++ + +++ GC I R+ + L+I Q Y++SMV++FDV+ +IPA+ GV K D+ EK ++P REA+G+++W + +RPD++ AVRA+AR PA H A+ KI+ YL T
Sbjct: 330 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDD-------EKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGT 631
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: UPI00136FC456 (Ty1/Copia family RNAse HI domain-containing protein n=2 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI00136FC456) HSP 1 Score: 217 bits (552), Expect = 1.050e-61 Identity = 129/357 (36.13%), Postives = 198/357 (55.46%), Query Frame = 1
Query: 19 LDIQEPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIK--IPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
LD EP N +AM P+ N W +A K E+ M +N V P+ + + K ++K++ DG V YK RLVA+GF Q+ GV Y E +SP S+R++LA AA D E+ D K AFL + EELY+ PE + K V +L ++IYGLVQA R W KRF + A GF Q + C+++KV G + ++++VDDIL + ++ L + F +KD+G+A Y +G I R+R R + + Q Y++ ++++F +++ K +P G LSK P E++E +R PY A+G++++ TRPD++ A+ RF NP H AV I++YL T
Sbjct: 71 LDNNEPANYEEAMVGPDSNKWLEAMKSEIGSMYENKVWTLEILPEGRKAIQNKWIFKKKTDADGNVTVYKARLVAKGFSQVPGVDYDETFSPVAMLKSVRIMLAIAAFFDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNKRFDEVIKAFGFIQVVGESCIYKKV-SGSSVAFLILYVDDILLIGNNVELLESIKDYLNKSFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSTYLDKVLKRFKMEQSKKGFLPVLQGT-RLSKTQCPATDEDREHMRSVPYASAIGSIMYAMLCTRPDVSLAISMAGRFQSNPGVDHWTAVKNILKYLKRT 425
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 223 bits (567), Expect = 2.570e-61 Identity = 136/358 (37.99%), Postives = 202/358 (56.42%), Query Frame = 1
Query: 19 LDIQEPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEYRKFPGA--VGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDV---KKGIKIPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
LD EP N +AM P+ N W +A K E+ M +N V V P ++ + K ++K++ +G V YK RLVA+GF QI+GV Y E +SP S+R++LA AA D E+ D K AFL ++ EELY+ PE + GA V +L ++IYGLVQA R W RF + A GF Q + C+++KV G + +V++VDDIL D ++ A L + F +KD+G+A Y +G I R+R R + + Q Y++ +++KF++ KKG +P G+ LSK P ++EK+ PY AVG+L++ TRPDI + + R+ NP H AV I++YL T
Sbjct: 800 LDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGF-LPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRYQSNPGAEHWTAVKNILKYLKRT 1154
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 221 bits (563), Expect = 3.640e-61 Identity = 133/353 (37.68%), Postives = 195/353 (55.24%), Query Frame = 1
Query: 31 EPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPKDKVVVGMKMLYKREVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATAAAKDRELRHFDAKQAFLTADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWKKRFCSDMAAIGFKQGKADPCVFRKVVDGEAEVVVVVHVDDILAHTKDTATMDRFAAELRQKFKLKDMGDARYYMGCHITRNRKVRELKIEQHLYVESMVEKFDVKKGIK--IPATSGVPTLSKADEPRNPEEKEKVRKFPYREAVGALIWTAKITRPDIASAVRAMARFCENPAPAHKKAVMKIMQYLLHT 1077
EP N + A+ PE W A EM+ M DN V V P VG K ++KR+ G V YK RLVA+GF Q +GV Y E +SP SIR+LLA AA D E+ D K AFL + E++Y+ PE + K+P V +LNK+IYGL QA RCW RF + GF + + +PCV+RK G ++++VDDIL + ++ L F +KD+G+A Y +G I R+R R L + Q Y++ M+ +F+++ K IP T G L+K+ P E +++ PY A+G++++ TRPD++ A+ +RF ++P AH AV I++YL T
Sbjct: 465 EPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTSRFQQSPGIAHWTAVKNILKYLRRT 815 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5801.13274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5801.13274.1 >prot_H-elongata_contig5801.13274.1 ID=prot_H-elongata_contig5801.13274.1|Name=mRNA_H-elongata_contig5801.13274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=359bp MAIHATLDIQEPRNRRQAMESPEWNDWKKAEKIEMRGMVDNCVSKQVAWPback to top mRNA from alignment at H-elongata_contig5801:10246..11322+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5801.13274.1 ID=mRNA_H-elongata_contig5801.13274.1|Name=mRNA_H-elongata_contig5801.13274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1077bp|location=Sequence derived from alignment at H-elongata_contig5801:10246..11322+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5801:10246..11322+ >mRNA_H-elongata_contig5801.13274.1 ID=mRNA_H-elongata_contig5801.13274.1|Name=mRNA_H-elongata_contig5801.13274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2154bp|location=Sequence derived from alignment at H-elongata_contig5801:10246..11322+ (Himanthalia elongata Himel1 dioecious)back to top |