prot_H-elongata_contig580.13272.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig580.13272.1
Unique Name	prot_H-elongata_contig580.13272.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	137

Homology

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: D8LFL1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL1_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 4.060e-55
Identity = 89/122 (72.95%), Postives = 106/122 (86.89%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKKRFNEASSEADVKLQATCFCARAAGA 122
            MLAGEIEYRKGNFE AFE LREAVRLD  LLYDEPWGW+VP+ HALGALLLEQ+ ++EAT VFR++L+MY +NMW LLGL QCL+KAGDP+AV+ K+R++EASS A+ K  ATCFCA+ AGA
Sbjct:  397 MLAGEIEYRKGNFETAFEHLREAVRLDTSLLYDEPWGWMVPSRHALGALLLEQDHIQEATEVFRADLKMYPSNMWGLLGLSQCLDKAGDPEAVEAKRRYDEASSTAESKPAATCFCAKVAGA 518

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7Y2CJ48_9BACT (Tetratricopeptide repeat protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2CJ48_9BACT)

HSP 1 Score: 136 bits (342), Expect = 5.600e-35
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVD-VKKRFNEASSEADVKLQATCFC 116
            MLAGE+EYR+GN + AF  LREAVR D  L YDEPWGW+ PA HALGALLLEQ RVEEA  VFR++L  +  N WAL GL +CL ++G     D V+ +   A+  ADV+++A+C+C
Sbjct:  427 MLAGEVEYRRGNLDAAFRHLREAVRRDDALNYDEPWGWMQPARHALGALLLEQGRVEEAGEVFRADLRRHPKNAWALHGLEECLRRSGKESDADSVRAQLGAATVRADVRIKASCYC 543

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7X5VN10_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X5VN10_9BACT)

HSP 1 Score: 130 bits (328), Expect = 2.690e-34
Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKK-RFNEASSEADVKLQATCFC 116
            +LAGE+EYRKGN+E AFE LR AV+LD +L YDEPWGW+ PA H LGALL EQ+R EEA +V+ +NL  Y  N WAL GL + L   G  +  D  + RF EA ++ADV +  +C+C
Sbjct:  215 VLAGEVEYRKGNYETAFEHLRFAVQLDEQLNYDEPWGWMEPARHPLGALLTEQKRYEEAVSVYEANLARYPENGWALHGLAESLRGLGRTEEADAAQARFQEAWNDADVVIPGSCYC 331

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: UPI000B25CA76 (hypothetical protein n=1 Tax=Marinifilum fragile TaxID=570161 RepID=UPI000B25CA76)

HSP 1 Score: 134 bits (338), Expect = 2.700e-34
Identity = 65/117 (55.56%), Postives = 89/117 (76.07%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 116
            M+AGEI YRKG++E +FE+LR+AV+LD  L YDEPWGW+ PA HALGALL+EQER EEA +V+R++L+ +  N+WAL GL + LEK G + +A     +F  AS+ ADVK+  +C+C
Sbjct:  457 MMAGEIAYRKGDYEFSFEQLRQAVQLDDALNYDEPWGWMQPARHALGALLMEQERFEEAESVYRNDLKRHPKNLWALHGLTESLEKQGKEEEAKKYHSQFEIASARADVKVDRSCYC 573

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A3D4NUR4_PSESP (Uncharacterized protein (Fragment) n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A3D4NUR4_PSESP)

HSP 1 Score: 125 bits (313), Expect = 3.280e-34
Identity = 63/126 (50.00%), Postives = 86/126 (68.25%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEM---------YKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 116
            ML GEIEYRKGN++ AF  LR+A+ LD  L YDEPWGW+ P  HALGALLLEQ RVEEA   +R++L +         + +N+W+L G  +CL++ G D +A  V+ R + A + ADV++ A+CFC
Sbjct:    5 MLRGEIEYRKGNYDSAFAHLRQALSLDDNLPYDEPWGWMQPVRHALGALLLEQGRVEEALQAYRADLGLDNTLSRAAWHLDNVWSLHGYVECLKRLGRDAEAAAVQTRLDLAMARADVEITASCFC 130

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7S2XHI4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHI4_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 4.260e-33
Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGD-PKAVDVKKRFNEASSEADVKLQATCFCA 117
            ML+GEI+YR G++EKAF+ L EAVR D  L YDEPWGW+ PA HALGALL EQ+R + A  VF ++L  +  N+W+L+GL +C E  G+  +A  V +RF  AS   DV ++A C CA
Sbjct:   29 MLSGEIKYRSGDYEKAFQDLEEAVRRDDALPYDEPWGWMQPARHALGALLAEQKRYKVAREVFLTDLRKWPENLWSLMGLRRCEEALGNNEEAKKVHERFKVASKRLDVPMEAPCACA 146

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A517N151_9BACT (Tetratricopeptide repeat protein n=2 Tax=Adhaeretor mobilis TaxID=1930276 RepID=A0A517N151_9BACT)

HSP 1 Score: 131 bits (329), Expect = 5.490e-33
Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAV-DVKKRFNEASSEADVKLQATCFC 116
            M+AGEI YR+G F+ AFE LREA+R D  L YDEPWGW+ PA HALGALLLEQE  EEA  V+R +L  +  N WAL GL +CLEK G  + +   +++F  A+   DVK+  +C+C
Sbjct:  473 MIAGEIAYRRGEFDVAFEHLREAIRRDDALNYDEPWGWMQPARHALGALLLEQEHYEEAEAVYREDLRRHPKNAWALHGLAECLEKQGKTEELAQCREQFTIATQRTDVKIDRSCYC 589

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: UPI00190FA794 (tetratricopeptide repeat protein n=1 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI00190FA794)

HSP 1 Score: 130 bits (326), Expect = 1.030e-32
Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 116
            M+AGEI YRKGNF++AF +LR AV+LD  + YDEPWGW+ PA HALGALL+EQ   E+A  VFR++L+ +  N W+L GL +CL + G + +A  ++ +F  A+ +ADV +  +CFC
Sbjct:  430 MVAGEIAYRKGNFDEAFRQLRNAVKLDDAMNYDEPWGWMQPARHALGALLIEQRHYEQAEQVFRADLKKHPRNPWSLNGLAECLMELGRNDEATTIRNQFLSAAKQADVTIDRSCFC 546

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A1B9ISB5_9TREE (Uncharacterized protein n=2 Tax=Kwoniella mangrovensis TaxID=463800 RepID=A0A1B9ISB5_9TREE)

HSP 1 Score: 129 bits (325), Expect = 1.710e-32
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEM---------YKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFCARAAGAKTTSAMANKEVCC 135
            ML GEIEYRKGN+EKAFE LREAVR    ++Y EPWGW+ P  HAL ALLLEQ+RVEEAT V+  +L +         + NN+WAL G +QCL++ G + +AV  +K+   A + ADV ++ +CFCA A+  +      + ++CC
Sbjct:  428 MLDGEIEYRKGNYEKAFEYLREAVRRYDNIVYAEPWGWMQPVRHALAALLLEQDRVEEATVVYEEDLGISGTLPRACQHPNNVWALYGYHQCLKRLGRNQEAVIWEKQLAIALAVADVPIKTSCFCAGASEREIDGNNLSAKLCC 572

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BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7S4IH55_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IH55_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 1.950e-32
Identity = 61/125 (48.80%), Postives = 87/125 (69.60%), Query Frame = 0

Query:    1 MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKK---RFNEASSEADVKLQATCFCARAAGA 122
            ML GEIEYRKGNF  AFE LR AV     ++YDEPWGW++P  HALGALLLEQE+ EEA  V+R +L+++ NN+W++ GL  CL++  D    +++    +    S+ +D+ + A+CFC+ +AGA
Sbjct:  418 MLFGEIEYRKGNFTAAFEFLRCAVDFCDNIVYDEPWGWMIPPRHALGALLLEQEKFEEAATVYREDLKIHANNLWSIGGLIACLKQISDADTKEIQNLQCKLKYISARSDINVSASCFCSMSAGA 542

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot

BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFL1_ECTSI	4.060e-55	72.95	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7Y2CJ48_9BACT	5.600e-35	56.41	Tetratricopeptide repeat protein n=1 Tax=Gemmatimo...	[more]
A0A7X5VN10_9BACT	2.690e-34	54.70	Uncharacterized protein n=1 Tax=Acidobacteria bact...	[more]
UPI000B25CA76	2.700e-34	55.56	hypothetical protein n=1 Tax=Marinifilum fragile T...	[more]
A0A3D4NUR4_PSESP	3.280e-34	50.00	Uncharacterized protein (Fragment) n=1 Tax=Pseudom...	[more]
A0A7S2XHI4_9EUKA	4.260e-33	52.54	Hypothetical protein n=1 Tax=Lotharella oceanica T...	[more]
A0A517N151_9BACT	5.490e-33	53.85	Tetratricopeptide repeat protein n=2 Tax=Adhaereto...	[more]
UPI00190FA794	1.030e-32	51.28	tetratricopeptide repeat protein n=1 Tax=Roseiconu...	[more]
A0A1B9ISB5_9TREE	1.710e-32	48.28	Uncharacterized protein n=2 Tax=Kwoniella mangrove...	[more]
A0A7S4IH55_9EUKA	1.950e-32	48.80	Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..124 e-value: 1.8E-11 score: 45.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 3..91
None	No IPR available	PFAM	PF13424	TPR_12	coord: 4..72 e-value: 3.7E-7 score: 30.3
None	No IPR available	PANTHER	PTHR45588:SF1		coord: 1..120
None	No IPR available	PANTHER	PTHR45588	FAMILY NOT NAMED	coord: 1..120
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..73 score: 11.315

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig580	contig	H-elongata_contig580:722..2018 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig580.13272.1	mRNA_H-elongata_contig580.13272.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig580 2..2315 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig580.13272.1 ID=prot_H-elongata_contig580.13272.1|Name=mRNA_H-elongata_contig580.13272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALL
LEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKKRFN
EASSEADVKLQATCFCARAAGAKTTSAMANKEVCCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom