prot_H-elongata_contig57957.13268.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57957.13268.1
Unique Nameprot_H-elongata_contig57957.13268.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length230
Homology
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Match: D7G2Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q5_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 2.160e-58
Identity = 102/125 (81.60%), Postives = 114/125 (91.20%), Query Frame = 0
Query:  104 QAVDPEIKVVPFEVQEPSLGAAVVGHVTILEGSCYVWASTEGSGAQGSLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEARVIALLRTE 228
            +AV PE+KVV F+V+EP+LGA+VVGHV +L GSCYVWA+TEGS AQGSLAAAVGTRF GGMPTATPLL G G GEAGGGGV +SMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEA+V+ALL+ E
Sbjct:  233 EAVLPELKVVSFDVREPTLGASVVGHVVVLAGSCYVWAATEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGGGGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAE 357          
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Match: A0A6H5K9L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L5_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 5.490e-57
Identity = 100/125 (80.00%), Postives = 113/125 (90.40%), Query Frame = 0
Query:  104 QAVDPEIKVVPFEVQEPSLGAAVVGHVTILEGSCYVWASTEGSGAQGSLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEARVIALLRTE 228
            +AV PE+K+V F+V+EP+LGA+VVGHV +L GSCYVWA+TEGS AQGSLAAAVGTRF GGMPTATPLL G G GEAG GGV +SMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEA+V+ALL+ E
Sbjct:  238 EAVLPELKIVSFDVREPTLGASVVGHVVVLAGSCYVWATTEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGEGGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAE 362          
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Match: A0A485KKL7_9STRA (Aste57867_8572 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.060e-10
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:  130 VTILEGSCYVWASTEGSGAQ-GSLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEARVIALLRTE 228
            + +L  +C+VW   +GS A+ GS++ AV TR+   +P A+ L+ GS      G  V   MAQRL  RTG+ VFVSC+L ED   L A VE +++A LR E
Sbjct:   39 IWLLPNACFVWIGLDGSPARMGSMSTAVKTRYDP-LPLASSLIGGS------GDEVEQQMAQRLVLRTGKQVFVSCNLPEDDMELCAFVERQIVARLREE 131          
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Match: A0A6G0WHC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.330e-6
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0
Query:  130 VTILEGSCYVWASTEGSGAQ-GSLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEARVIALLRTEG 229
            + +L  +C+VW   + +    GS++ AV T++   +P A+ L+        GG  +   MAQRL  RTGR VFVSC+L +D   L A +E  +I  L  E 
Sbjct:   34 IWLLANACFVWIGLDSTAVSLGSMSTAVKTKYDP-LPLASSLI-------GGGNEMEQQMAQRLVLRTGRQVFVSCNLPDDDMELGAFIERAIIKRLNQES 126          
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Match: W4FSB2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.840e-5
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0
Query:  130 VTILEGSCYVWASTEGSGA-QGSLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEARVIALLR 226
            + +L  +C+VW   + +    GS++ AV TR+   +P A+ LL G      G       MAQRL  RTG+ VFVSC+L ED   L A VE  ++  LR
Sbjct:   39 IWLLAHACFVWVGLDETPVCMGSMSTAVKTRYDP-LPLASSLLGG------GADDTEQQMAQRLVLRTGKQVFVSCNLPEDDMELGAYVERAILQRLR 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57957.13268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G2Q5_ECTSI2.160e-5881.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9L5_9PHAE5.490e-5780.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485KKL7_9STRA1.060e-1044.00Aste57867_8572 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0WHC5_9STRA4.330e-635.64Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FSB2_9STRA1.840e-538.78Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 127..206
e-value: 7.4E-17
score: 61.3
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559FAMILY NOT NAMEDcoord: 125..226
NoneNo IPR availablePANTHERPTHR33559:SF1PROTEASOME ASSEMBLY CHAPERONE 4coord: 125..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57957contigH-elongata_contig57957:423..1350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57957.13268.1mRNA_H-elongata_contig57957.13268.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57957 378..2564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57957.13268.1 ID=prot_H-elongata_contig57957.13268.1|Name=mRNA_H-elongata_contig57957.13268.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MRDMEEAAKNIGPYRIRLVTGDVEDKPVVSGRRIMGRLPGIKSMFSMTRK
RSTSSLVAKQSLRSQSDLRPQEPLAADLPIPPHQSAGEEEAFVASMGGPK
NVVQAVDPEIKVVPFEVQEPSLGAAVVGHVTILEGSCYVWASTEGSGAQG
SLAAAVGTRFGGGMPTATPLLDGSGRGEAGGGGVSISMAQRLCKRTGRVV
FVSCDLSEDSQILVAAVEARVIALLRTEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4