prot_H-elongata_contig57581.13229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57581.13229.1
Unique Nameprot_H-elongata_contig57581.13229.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 2.580e-33
Identity = 66/93 (70.97%), Postives = 81/93 (87.10%), Query Frame = 0
Query:    1 MVPRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDREVVG 93
            +VP+L++ Y+LLLSTR GSM+AA+CAA+GGAKERKRMMR+LKG+VAASL HRD+Y+AVIRLVESVDDT++CQK ILAELLKP E +      G
Sbjct:  363 LVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAG 455          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.740e-27
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 MVPRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDREVVG 93
            MVP +++ Y+ LLSTR GS +AA+CAAYG AK+RKRMM+  KG V  SL HRD+YLAV+RLV SVDDT++CQK++LAELL PL       V G
Sbjct:  387 MVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTG 479          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A7S1TQU4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQU4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.300e-18
Identity = 43/82 (52.44%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    3 PRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLE 84
            P L E  ++LL++R G+ +AA+ AAYGGA+ERKRM ++LKGHV A+L HRD+Y+A+++LV+  DDT+S +K IL E+ +  E
Sbjct:   97 PALAEHAIMLLTSREGARAAALVAAYGGARERKRMTKALKGHVKATLHHRDAYIALLKLVDVTDDTVSTKKNILPEIFEVAE 178          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: K0QZQ0_THAOC (CPL domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZQ0_THAOC)

HSP 1 Score: 89.7 bits (221), Expect = 2.290e-18
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    1 MVPRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDR--EVVGRETVHYPVPPVVLRD 108
            + P L E  L LLSTRAG+     C AY   K+RK+M++ LKG+  +SL HRD+YLAV+R+V+ +DDT+   KT+LAEL +  +A KD   + VGRE    P+  +V  D
Sbjct:  272 LTPALAEHSLHLLSTRAGTKVVCECFAYATVKDRKKMIKCLKGYARSSLLHRDAYLAVLRMVDVMDDTVLLNKTLLAELHRNPDAEKDDAGDEVGREDQDSPILDLVQSD 381          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A7S1CXQ3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXQ3_CYCTE)

HSP 1 Score: 87.8 bits (216), Expect = 5.640e-18
Identity = 40/78 (51.28%), Postives = 60/78 (76.92%), Query Frame = 0
Query:   12 LLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDR 89
            +LSTRAG+   A CA YG AK+RKR+M+SLKG+  +SL HRD+YLA++RL++  DDT++  K++LAE+L    + +D+
Sbjct:   57 MLSTRAGTCVVAACAGYGTAKDRKRIMKSLKGYTRSSLLHRDAYLAILRLIQVTDDTVALHKSVLAEILTDPTSKEDK 134          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A448Z1A3_9STRA (PUM-HD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1A3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.770e-16
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0
Query:   12 LLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDRE 90
            LLSTR G+   A CA+YG  K+RKR  +SLKG+ ++SL HRD+YLA++RLV+  DDT+S QK++L E+L   +   D E
Sbjct:  299 LLSTRVGTRVVAACASYGTPKDRKRSCKSLKGYTSSSLLHRDAYLALLRLVQVTDDTVSIQKSVLNEILTKPKEGNDEE 377          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A7S2XI69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XI69_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.860e-16
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 0
Query:   13 LSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDRE 90
            LSTR GS+  A CA+YG  K+RKR+++SLKG+  +SL HRD+Y+A++R+V+  DDT+S  K++LAE+L   +   D E
Sbjct:   39 LSTRPGSIVVAACASYGTPKDRKRIIKSLKGYTRSSLLHRDAYIAILRIVDVTDDTVSVHKSVLAEILVTPDDKDDDE 116          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A7S1ZSE9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSE9_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.920e-16
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    3 PRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAEL 79
            P +++  + +LSTRAG+   A CAAYG  K+RK +MRSLKG+  +SL HRD+Y+AV+RL + VDDT++  K +L EL
Sbjct:    6 PSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVEL 82          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A7S4QEX1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEX1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.490e-16
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    3 PRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAEL 79
            P +++  + +LSTRAG+   A CAAYG  K+RK +MRSLKG+  +SL HRD+Y+AV+RL + VDDT++  K +L EL
Sbjct:  268 PSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVEL 344          
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Match: A0A1E7FCX4_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCX4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.520e-16
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0
Query:   12 LLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLTHRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDRE 90
            LLSTR G+   A CA+YG  K+RKR+ +SLKG+  +SL HRD+YLA++RL++  DDT+S QK++L E+L       D E
Sbjct:  294 LLSTRVGTRVVAACASYGTPKDRKRICKSLKGYTTSSLQHRDAYLALLRLIQVTDDTVSIQKSVLNEILTKPTKENDAE 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57581.13229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7W3_9PHAE2.580e-3370.97PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T9_9STRA7.740e-2761.29Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S1TQU4_9STRA1.300e-1852.44Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K0QZQ0_THAOC2.290e-1846.36CPL domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S1CXQ3_CYCTE5.640e-1851.28Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A448Z1A3_9STRA1.770e-1651.90PUM-HD domain-containing protein n=1 Tax=Pseudo-ni... [more]
A0A7S2XI69_9STRA1.860e-1650.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1ZSE9_9STRA1.920e-1651.95Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QEX1_9STRA4.490e-1651.95Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7FCX4_9STRA4.520e-1650.63ARM repeat-containing protein n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 10..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57581contigH-elongata_contig57581:547..1182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57581.13229.1mRNA_H-elongata_contig57581.13229.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57581 541..1354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57581.13229.1 ID=prot_H-elongata_contig57581.13229.1|Name=mRNA_H-elongata_contig57581.13229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MVPRLLEPYLLLLSTRAGSMSAAICAAYGGAKERKRMMRSLKGHVAASLT
HRDSYLAVIRLVESVDDTISCQKTILAELLKPLEASKDREVVGRETVHYP
VPPVVLRDLFTSPRLVYASLRICIAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040059PUM3
IPR016024ARM-type_fold