mRNA_H-elongata_contig57566.13227.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WYY7_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WYY7_SARFS) HSP 1 Score: 335 bits (858), Expect = 1.960e-112 Identity = 167/192 (86.98%), Postives = 177/192 (92.19%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASR 576
AEN+SLKGSI+GSLG+ GRELVAKC+PEDA TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDAS PDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRAD TTFWNQFFVAALRDGEG TVNYVGVQCKVGDDYARIVV AQ KQLA +AA ++R
Sbjct: 95 AENESLKGSIIGSLGQHGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASPPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADDTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLARSGSAAGSTR 286
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X4A7_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A126X4A7_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.090e-112 Identity = 167/192 (86.98%), Postives = 178/192 (92.71%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASR 576
AEN+SLKGSI+GSLG+RGRELVAKC+PEDA TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRADGTTFWNQFFVAALRDG+G TVNYVGVQCKVGDDYARIVV AQ KQ A + A ++R
Sbjct: 187 AENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGDGNTVNYVGVQCKVGDDYARIVVNAQKKQFARSGSTAGSTR 378
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X308_SARHM (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126X308_SARHM) HSP 1 Score: 341 bits (874), Expect = 4.760e-111 Identity = 174/212 (82.08%), Postives = 185/212 (87.26%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASRWAALPPTGQPSSNPPVAGMA 636
AEN+SLKGSI+GSLG+RGRELVAKC+PEDA TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRADGTTFWNQFFVAALRDGEG TVNYVGVQCKVGDDYARIVV AQ KQLA + A ++R QP P +G A
Sbjct: 386 AENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLARSGSTAGSARRGPQTQREQPVQRPSTSGTA 597
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X2D5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D5_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.160e-110 Identity = 168/189 (88.89%), Postives = 178/189 (94.18%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAA 567
AENDSLKGSIVGSLGERGRELVAKC P D GG+LVT NP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LTRYKLTEVLGRNCRFLQGPETDP+AVDKIR AI+EGYDTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVGDDYA+IVVT QN+QLAS SA++A
Sbjct: 381 AENDSLKGSIVGSLGERGRELVAKCVPADTGGSLVTANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTRYKLTEVLGRNCRFLQGPETDPKAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGDTVNYVGVQCKVGDDYAKIVVTEQNRQLASPSASSA 569
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WXQ5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXQ5_9PHAE) HSP 1 Score: 323 bits (827), Expect = 3.310e-108 Identity = 162/186 (87.10%), Postives = 169/186 (90.86%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSA 558
AENDSLKGSIV SLG RGRELVAKC PEDA G LVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LT YKL +VLGRNCRFLQGPETDPRAVDKIR AIEEG D S CLLNYRAD TTFWNQFFVAALRDG GATVNYVGVQCKVGDDYARIVV+ QN++L++ SA
Sbjct: 77 AENDSLKGSIVSSLGGRGRELVAKCVPEDAEGPLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLMDVLGRNCRFLQGPETDPRAVDKIRNAIEEGSDASVCLLNYRADNTTFWNQFFVAALRDGAGATVNYVGVQCKVGDDYARIVVSEQNRKLSAPSA 262
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WZ78_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ78_9PHAE) HSP 1 Score: 317 bits (813), Expect = 1.020e-105 Identity = 161/188 (85.64%), Postives = 170/188 (90.43%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAA 564
AENDSLKGSIV SLG+RGR LVA+CAPED GG ++T NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LT YKL+EVLGRNCRFLQGPETDPRAVDKIR AIEE D S CLLNYRAD TTFWNQFFVAALRDG+G TVNYVGVQCKVGDDYARIVV+ QNKQLA S +A
Sbjct: 109 AENDSLKGSIVQSLGDRGRTLVAECAPEDVGG-IITANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASRGFLELTGYKLSEVLGRNCRFLQGPETDPRAVDKIRKAIEESADASVCLLNYRADMTTFWNQFFVAALRDGDGKTVNYVGVQCKVGDDYARIVVSEQNKQLAGPSGSA 295
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WV07_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV07_9PHAE) HSP 1 Score: 310 bits (793), Expect = 2.710e-99 Identity = 155/182 (85.16%), Postives = 166/182 (91.21%), Query Frame = 1
Query: 4 ENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLAS 549
ENDSLKGSIV SLG+RGRELVAKC PE+A G L+T NP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFL+LT YKL EVLGRNCRFLQGP TDP+AVDKIR AIE+ DTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVGDDYARIVV QN+QL++
Sbjct: 380 ENDSLKGSIVESLGDRGRELVAKCVPEEAEG-LITANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLELTGYKLNEVLGRNCRFLQGPATDPKAVDKIRKAIEDKSDTSVCLLNYRADGTTFWNQFFVASLRDGDGNTVNYVGVQCKVGDDYARIVVGEQNRQLST 560
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A6H5L7C4_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7C4_9PHAE) HSP 1 Score: 289 bits (740), Expect = 4.890e-91 Identity = 152/204 (74.51%), Postives = 159/204 (77.94%), Query Frame = 1
Query: 4 ENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVG--------------------DDYARIVVTAQNKQLASLS 555
EN+SLKGSIVGSLGERGRELVAKC P D GG+L ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL LTRYKL EVLGRNCRFLQG ETDPRAVDKIR AI+EGYDTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVG DDYA+IVV QN+Q A S
Sbjct: 387 ENESLKGSIVGSLGERGRELVAKCMPADTGGSL----------ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLALTRYKLAEVLGRNCRFLQGAETDPRAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGNTVNYVGVQCKVGTESMYRRRIHAPLAAFECVGDDYAKIVVNEQNRQFAGQS 580
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: C5NSW4_9PHAE (Aureochrome1-like protein (Fragment) n=1 Tax=Fucus evanescens TaxID=87147 RepID=C5NSW4_9PHAE) HSP 1 Score: 256 bits (654), Expect = 1.720e-83 Identity = 129/143 (90.21%), Postives = 131/143 (91.61%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQF 429
AENDSLKGSIVGSLGERGRELVA +PED GTLVT NPTQATK LDDPDYSLVKALQTAQQN VITDASL DNPIVFASSGFL+LTRY LTEVLGRNCRFLQGPETDPRAVDKIRTAIEEG DTS CLLNYRADGTTFWN F
Sbjct: 54 AENDSLKGSIVGSLGERGRELVAMFSPEDEDGTLVTANPTQATKTLDDPDYSLVKALQTAQQNSVITDASLADNPIVFASSGFLELTRYTLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGCDTSVCLLNYRADGTTFWNLF 196
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A7S2WVR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVR6_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.790e-82 Identity = 125/177 (70.62%), Postives = 141/177 (79.66%), Query Frame = 1
Query: 1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQ 531
AEND L+ +I +G EL+A C + G+L+ NP AT+ILDDPDYSLVKALQTAQQNFVITD SLPDNPIVFASSGFL LT Y L +VLGRNCRFLQGPETDPRAV KIR AI+EG+DTS CLLNYR DG+TFWNQFFVA LRD EG VNYVGVQCKV DD+AR + ++
Sbjct: 76 AENDKLRAAITEHMGSEADELLAACT--EGTGSLIAANPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASSGFLTLTGYSLDQVLGRNCRFLQGPETDPRAVHKIRKAIQEGFDTSVCLLNYRIDGSTFWNQFFVAPLRDSEGNVVNYVGVQCKVSDDFARAIAQSE 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57566.13227.1 >prot_H-elongata_contig57566.13227.1 ID=prot_H-elongata_contig57566.13227.1|Name=mRNA_H-elongata_contig57566.13227.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=240bp AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDback to top mRNA from alignment at H-elongata_contig57566:318..3585- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57566.13227.1 ID=mRNA_H-elongata_contig57566.13227.1|Name=mRNA_H-elongata_contig57566.13227.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3268bp|location=Sequence derived from alignment at H-elongata_contig57566:318..3585- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57566:318..3585- >mRNA_H-elongata_contig57566.13227.1 ID=mRNA_H-elongata_contig57566.13227.1|Name=mRNA_H-elongata_contig57566.13227.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1440bp|location=Sequence derived from alignment at H-elongata_contig57566:318..3585- (Himanthalia elongata Himel1 dioecious)back to top |