mRNA_H-elongata_contig57138.13166.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: D8LRB5_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB5_ECTSI) HSP 1 Score: 256 bits (653), Expect = 2.640e-74 Identity = 136/209 (65.07%), Postives = 157/209 (75.12%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRGEVDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQLSPSPIPKDEYMCQDSQLGSGDAEH-------SSSAQDLDIVGGTRKMSRNAAVYTVHVGLEHSHADYYVSNLKKLRELLQKFDEISTRE 764
TP T+ SLTWHYRDADPHFGLWQAKDMQ+HMEDVLSNLPLEI+QGNRMV VRHQAA+KS V E VL L S QS+ RGEVDF+LCVGDDRSDEDMFQT+K FRD A+++ TP LS +D D GSG+ + +SS Q + +VG RKM+ NAAVYTVH+GLEHSHADYY+ NL+KLRELL KFDE+ST E
Sbjct: 688 TPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLSNLPLEILQGNRMVEVRHQAANKSMVAEEVLKLLSTEQSVRQRGEVDFILCVGDDRSDEDMFQTVKRFRDLAKEAPTPVLSED---EDGMPFSDGPPGSGEMDQGVGSGSVASSGQGMAMVGVNRKMAGNAAVYTVHIGLEHSHADYYLENLRKLRELLMKFDEMSTEE 893
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A6H5J883_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J883_9PHAE) HSP 1 Score: 189 bits (479), Expect = 7.820e-51 Identity = 111/209 (53.11%), Postives = 126/209 (60.29%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQ----AASKSKVVEGVLNLFSGPQSLHDRGEVDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQLSPSPIPKDEYMCQDSQLGSGDAEHSSSAQDLDIVGGTRKMSRNAAVYTVHVGLEHSHADYYVSNLKKLRELLQKFDEISTREQVG 773
TP T+ SLTWHYRDADPHFGLWQAKDMQ+HMEDVL NLPLEI+QGNRMV VRHQ AA+KS V E VL L S QS+ RGEVDF+LCVGDDRSDEDMFQT+K FRD A+++ TP LS +DE ADYY+ NL+KLRELL KFDE+ST E+ G
Sbjct: 505 TPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLHNLPLEILQGNRMVEVRHQVRYQAANKSMVAEEVLKLLSTEQSVRQRGEVDFILCVGDDRSDEDMFQTVKRFRDLAKEAPTPVLS-----EDE------------------------------------------------ADYYLENLRKLRELLMKFDEVSTEERGG 660
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A835Z8I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8I3_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.360e-48 Identity = 105/196 (53.57%), Postives = 125/196 (63.78%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRGEVDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQLSPSPIPKDEYMCQDSQLGSGDAEHSSSAQDLDIVGGTRKMSRNAAVYTVHVGLEHSHADYYVSNLKKLRELLQKFD 746
TP T+ SLTWHYRDADPHFGLWQAKDMQ++MED LSN+PLEI+QGNRMV VRHQAA+KS V + VL S P + + GEVDFVLCVGDDRSDEDMF ++ RD AR SP + E GD E + R M+RNA VYTVH+G + S ADY + +L LR+LL+K D
Sbjct: 619 TPGTYIENKESSLTWHYRDADPHFGLWQAKDMQINMEDSLSNMPLEILQGNRMVEVRHQAANKSFVADRVLKAMSEPAARAEHGEVDFVLCVGDDRSDEDMFTMVQRLRDQAR------ASPPSMATGER---------GDHERDNPP---------RCMARNANVYTVHIGQDQSQADYKLDSLVSLRQLLRKLD 790
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: F0Y2I9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I9_AURAN) HSP 1 Score: 150 bits (378), Expect = 9.080e-37 Identity = 92/205 (44.88%), Postives = 117/205 (57.07%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRGEVDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQLSPSPIPKDEYMCQDSQLGSGDAEHSSSAQDLDIVGGTRKMSRNAAVYTVHVGLEHSHADYYVSNLKKLRELLQKFDEISTREQVG 773
TP T+ SL WHYRDADPHFG WQAKDMQ+HMEDV+SNLPLEIIQGNR+V VRH +KS V+E VL + GP+ + DFVLCVGDDRSDEDM+Q +K + HAR + D+ G DA A +Y VH+G + A+YY+ ++ +LR+LL+ IS R+ G
Sbjct: 668 TPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSNLPLEIIQGNRLVEVRHVGVNKSLVLEEVLRM--GPRGETADVDFDFVLCVGDDRSDEDMYQLLKAW--HARRAE----------------HDADKGGDDAP--------------------AQLYLVHIGTGATQAEYYLESVIELRKLLRGMASISLRDLRG 832
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: K8YXH8_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXH8_NANGC) HSP 1 Score: 139 bits (351), Expect = 3.950e-33 Identity = 72/114 (63.16%), Postives = 82/114 (71.93%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQ--SLHDRGEVDFVLCVGDDRSDEDMFQTIKCFRDHA 494
TP T+ SLTWHYRDADP+FG WQAKDMQ+ +EDVLSNLPLEIIQGNRMV VRHQ ASK VVE VL + P + + +DFV CVGDDR+DEDMFQ +K R A
Sbjct: 660 TPGTYIEKKESSLTWHYRDADPNFGSWQAKDMQIQLEDVLSNLPLEIIQGNRMVEVRHQGASKGMVVESVLRYMADPSRGAKNSDTPLDFVFCVGDDRTDEDMFQVLKILRGEA 773
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A8J2S9Z6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9Z6_9STRA) HSP 1 Score: 132 bits (333), Expect = 9.070e-31 Identity = 84/207 (40.58%), Postives = 110/207 (53.14%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHD-----RGE----------VDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQLSPSPIPKDEYMCQDSQLGSGDAEHSSSAQDLDIVGGTRKMSRNAAVYTVHVGLEHSHADYYVSNLKKLRELL 734
TP T+ SL WHYRDADPHFG WQAKDMQ+HMEDV+S LPLEIIQGNR+V VRH +KS V+E VL GP++ +D R E DFVLCVGDDRSDEDM+Q +K + HS + +D + R +Y VH+G +HA++ + ++ +LR++L
Sbjct: 712 TPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSTLPLEIIQGNRLVEVRHVGVNKSLVLEEVLR--QGPRNGYDPPPPSRSEDSPQVALTEDFDFVLCVGDDRSDEDMYQLLKSW-----------------------------------HSRRCEAID-----HEDDRAPDLYNVHIGPGATHAEFCLESVVELRKIL 876
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A7S1UK50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK50_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.230e-25 Identity = 76/180 (42.22%), Postives = 91/180 (50.56%), Query Frame = 3
Query: 177 TPATH------SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVL-------------------------------------------NLFSGPQS---LH---DRG-----------EVDFVLCVGDDRSDEDMFQTIKCFRDHARDSATPQL 518
TP T+ SLTWHYRDADPHFG WQAKDMQ+HMEDVL+NLPLEI+QGN+++ VRH+ A+KS V+E VL NL QS LH D G +VDFV CVGDDRSDEDMF +K A+++ L
Sbjct: 476 TPGTYIEDKDSSLTWHYRDADPHFGSWQAKDMQMHMEDVLTNLPLEILQGNKVLEVRHRNANKSTVLEAVLTRLVSIGNETNGAGVPQPPTAGGAEAGEASAPRTIAEDEELVRNLAKKSQSDGQLHAGADDGKPAFDMPLAFEQVDFVFCVGDDRSDEDMFYYLKSLYTEAQEAHAEHL 655
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A8K1FHA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHA0_PYTOL) HSP 1 Score: 106 bits (265), Expect = 8.720e-22 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 3
Query: 192 SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRG--EVDFVLCVGDDRSDEDMFQTI 473
SLTWHY DADPHFG WQAKD+Q+ +E L LE+ G+ V V H+ +K+KVVEGVL S PQ + + EVDFVLCV DD +D+ MFQT+
Sbjct: 946 SLTWHYGDADPHFGSWQAKDLQIVLERQLIGTALEVYAGHNWVSVEHEGCTKAKVVEGVLKHLSLPQQVRKKQQREVDFVLCVCDDWTDDQMFQTL 1041
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A2D4CD15_PYTIN (Trehalose-phosphatase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD15_PYTIN) HSP 1 Score: 106 bits (265), Expect = 8.890e-22 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 3
Query: 192 SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRGE--VDFVLCVGDDRSDEDMFQTIKCFRDHARD 500
SLTWHY DADP FG WQAKD+Q+++E L L LE+ G+ V V H+ +K+KV+EG+L S PQ + +G VDFVLCV DD +D+ MFQT++ A++
Sbjct: 1052 SLTWHYSDADPQFGSWQAKDLQINLERQLLGLALEVYAGHMYVSVEHEGCTKAKVLEGLLKHLSLPQQVQRKGRRAVDFVLCVCDDWTDDQMFQTLETLVSEAKE 1156
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Match: A0A2P4YEI9_9STRA (Trehalose-phosphatase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YEI9_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.450e-21 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 3
Query: 192 SLTWHYRDADPHFGLWQAKDMQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHDRG--EVDFVLCVGDDRSDEDMFQTI 473
SLTWHY DADPHFG WQAKD+Q+ +E L LE+ QG+ V V H+ +K++V+EG+L S P + + EVDFVLCV DD +D+ MFQT+
Sbjct: 29 SLTWHYGDADPHFGSWQAKDLQIILERQLIGTALEVYQGHMSVSVEHEGCTKTRVLEGLLKHLSLPDQISKKNDQEVDFVLCVCDDVTDDQMFQTL 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57138.13166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57138.13166.1 >prot_H-elongata_contig57138.13166.1 ID=prot_H-elongata_contig57138.13166.1|Name=mRNA_H-elongata_contig57138.13166.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp MQLHMEDVLSNLPLEIIQGNRMVGVRHQAASKSKVVEGVLNLFSGPQSLHback to top mRNA from alignment at H-elongata_contig57138:48..2572- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57138.13166.1 ID=mRNA_H-elongata_contig57138.13166.1|Name=mRNA_H-elongata_contig57138.13166.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2525bp|location=Sequence derived from alignment at H-elongata_contig57138:48..2572- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57138:48..2572- >mRNA_H-elongata_contig57138.13166.1 ID=mRNA_H-elongata_contig57138.13166.1|Name=mRNA_H-elongata_contig57138.13166.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig57138:48..2572- (Himanthalia elongata Himel1 dioecious)back to top |