mRNA_H-elongata_contig56819.13131.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig56819.13131.1
Unique NamemRNA_H-elongata_contig56819.13131.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 2.330e-111
Identity = 163/233 (69.96%), Postives = 194/233 (83.26%), Query Frame = 1 
Query:    1 DAKPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPGYSRIAEVVIQELVRRVGYH 699
            D KP IA S+AMDASSN  SC+YRSGYDFAVPLRH+    NLT++ PW R YF+TVKGNLY+SG G+ ERMS+VPLHSEP GV++ LNCFELH EHLLP+N +FC AL ET++RH++ DLMNTTFG+VPAGR PA+YRLAEVMSAGAIPVFV+RD VRPFPERVDW + SF+F PEEV  +MM TL++V+   L  MQR+S++AF +IFGEEPGY RIA VV+ ELV RVGYH
Sbjct:  303 DKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYH 535
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 6.150e-82
Identity = 128/233 (54.94%), Postives = 173/233 (74.25%), Query Frame = 1 
Query:    1 DAKPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPG-YSRIAEVVIQELVRRVGY 696
            D++P++A S AM+A++N  +C+YRSGYD +VPL  K    +L DV PWDR +F+T KG+LY+SG+G  ERMSLVPL  E +GV+++L+CFE+H EHLLP+NV++C AL +    H +  LMNTTFG+VPAGRSP +YRL EVMSAG+IPVFV  D V PF E +DWSSFSF F+P++VE  M+ TL+AV    L  MQR+SLEA+  IFG   G + + A +V++ L RR+ +
Sbjct:  195 DSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEH 427
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 4.320e-79
Identity = 123/231 (53.25%), Postives = 167/231 (72.29%), Query Frame = 1 
Query:    7 KPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPG-YSRIAEVVIQELVRRVGY 696
            +P +A S AM+A+SN  +C+YRSG+D +VPL  K    NL DV  WDR +F+T KG+LY+S +G  ERMSLVPL  E +GV+++L+CFELH EHLLP+NV++C AL +    H +  LMN+TFG+VPAGRSP ++RL EVMSAG+IPVFV  D V PF E +DWSSFSF F+P++V   M+ TL+AV    L  MQR+SL+A   IFG + G +   A ++++ L RR+G+
Sbjct:  101 RPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGH 331
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 4.410e-78
Identity = 122/231 (52.81%), Postives = 168/231 (72.73%), Query Frame = 1 
Query:    7 KPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPGYSR-IAEVVIQELVRRVGY 696
            +P++A S AM+A++N  +C+YRSGYD +VPL  +    +L +V P DR +F+T K  LY+SG+G  ER+SL+PL  E +GVVV ++CFE H EHLLP+N +FC ALK+    +D+  LMN+TFG+VPAGR PA+YRL EVMSAG+IPVFV RD V PF E++DW S SF F+P+EVE  MM+TL AV   +L +MQR+SLEA+  +FG +    R  A +++  L RR+G+
Sbjct:    9 RPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGH 239
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BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 4.130e-77
Identity = 118/222 (53.15%), Postives = 160/222 (72.07%), Query Frame = 1 
Query:   34 MDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFG-EEPGYSRIAEVVIQELVRRVGY 696
            M+A+SN  +C+YRSG+D +VPL       NL DV  WDR +F+T KG LY+SG+G  ERMSLVPL  E +GV+++L+CFE+H EHLLP+NV++C AL +    H +  LMN+TFG+VPAGRSP +YRL EVMSAG+IPVFV  D V PF E +DWSSFSF F+P++V   M+ TL+AV    L  MQR+SL+A   IFG ++  +   A ++++ L RR+G+
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGH 222
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 2.070e-76
Identity = 121/227 (53.30%), Postives = 163/227 (71.81%), Query Frame = 1 
Query:    7 KPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPGYSRIAEVVIQELVRR 687
            +P++A S AM+A++N  +C+YRSGYD +VPL  +    +L +V P DR +F+T K  LY+SG+G  ER+SL+PL  E HGVVV ++CFE H EHLLP+N +FC ALK+    +D+  LMN+TFG+VPAGR PA+YRL EVMSAG IPVFV RD V PF E++DW S SF F+P+EVE  MM TL AV   +L +MQR+SLEA+  +FG +    R +  +I  ++RR
Sbjct:  194 RPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRR 420
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BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 8.640e-70
Identity = 118/235 (50.21%), Postives = 157/235 (66.81%), Query Frame = 1 
Query:    4 AKPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPW---DRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPGYSRIAEVVIQELVRRVGYH 699
            A+P I+ + AMD S + LSCYYRSGYD ++PL   +  +   D  P    DR YF+T KG LY+ GYG  ER ++  +H   +GVV  + C  +HG+  LP+N D+C   ++    +D+  LMNTTF +VPAGRSP S+RL EVMSAGAIPVFV RD+++PF E++DW SFSF FSP++V   MM TL+AV   +L +MQR+SL A+  IFG    YS IA   I  LV+R+GYH
Sbjct:  296 ARPHISNTYAMDWSFDALSCYYRSGYDLSLPL---VPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTNYSVIASNAIDMLVQRIGYH 527
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.170e-58
Identity = 97/190 (51.05%), Postives = 128/190 (67.37%), Query Frame = 1 
Query:   34 MDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPW---DRRYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQ 594
            MD S + LSCYYRSGYD ++PL   +  +   D  P    DR YF+T KG LY+ GYG  ER ++   H   +GVV  + C  +HG+ +LP+N D+C   ++    +D+  LMNTTF +VPAGRSP S+RL EVMSAGAIPVFV RD+++PF E++DW SFSF FSP++V   MM TL+AV   RL +MQ
Sbjct:    1 MDWSFDALSCYYRSGYDLSLPL---VPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 4.990e-49
Identity = 106/249 (42.57%), Postives = 139/249 (55.82%), Query Frame = 1 
Query:   31 AMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNLYMSGYGFHERMSLVPLHS----------EPHG----------------VVVALNCFELHGEHLLPQNVDFCDAL-KETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRRSLEAFLDIFGEEPGYSRIAEVVIQELVRRVGY 696
            AM   SN   CYYR GYD A+PL  +     L +V P DR+YF T KG LY+SG G  ER +++ L S          E  G                V+V   C   H E LL  N   C+A  +E  +   + DLMNTTF ++PAGRSPA+YRLAE +SAGA+PVF+++D+V+PFP ++ WS FSF+F PEEV R M+ TL+AV    L  MQ  +LE F   FG  PG   +   V+  L  R+ +
Sbjct:  340 AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEVPR-MLKTLRAVPDRELAQMQATALEVFDTYFG--PGMDNMLHTVLDILEDRLYF 585
[Close]
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 8.700e-49
Identity = 86/177 (48.59%), Postives = 119/177 (67.23%), Query Frame = 1 
Query:   70 RSGYDFAVPLRHKLDSRNLTDVLPWDRRYFVTVKGNL--YMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQNVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPVFVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQ 594
            R+GYD +VPL  +    +L  V PWDRR+F+T   +L  Y+  +G  E M L+PL  + +GV ++++CFE H +HLLP+N +F  A  +     D+  LMN+TFG+VPAG S  +YRL EVMSAG+IPVFV RD V  F E++DW+S SF F+P+EV+   M+TL AV  E+L  MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56819.13131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRU9_9PHAE2.330e-11169.96GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JGQ8_9PHAE6.150e-8254.94GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI4.320e-7953.25Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H7_ECTSI4.410e-7852.81Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI4.130e-7753.15Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE2.070e-7653.30GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5L9T2_9PHAE8.640e-7050.21GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LQY4_ECTSI1.170e-5851.05Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI4.990e-4942.57Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI8.700e-4948.59Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56819contigH-elongata_contig56819:254..1626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.1
Seed ortholog evalue6.6e-93
Seed eggNOG ortholog2880.D7FYQ6
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Ec32 orthologEc-26_004330.1
Exons3
Model size702
Cds size702
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56819.13131.1prot_H-elongata_contig56819.13131.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig56819 254..1626 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930923.2038395-CDS-H-elongata_contig56819:253..3611622930923.2038395-CDS-H-elongata_contig56819:253..361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 254..361 -
1691679626.3186402-CDS-H-elongata_contig56819:253..3611691679626.3186402-CDS-H-elongata_contig56819:253..361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 254..361 -
1622930923.2240715-CDS-H-elongata_contig56819:568..9911622930923.2240715-CDS-H-elongata_contig56819:568..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 569..991 -
1691679626.3311408-CDS-H-elongata_contig56819:568..9911691679626.3311408-CDS-H-elongata_contig56819:568..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 569..991 -
1622930923.2402604-CDS-H-elongata_contig56819:1455..16261622930923.2402604-CDS-H-elongata_contig56819:1455..1626Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 1456..1626 -
1691679626.3454437-CDS-H-elongata_contig56819:1455..16261691679626.3454437-CDS-H-elongata_contig56819:1455..1626Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56819 1456..1626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig56819.13131.1

>prot_H-elongata_contig56819.13131.1 ID=prot_H-elongata_contig56819.13131.1|Name=mRNA_H-elongata_contig56819.13131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp
DAKPEIAESSAMDASSNTLSCYYRSGYDFAVPLRHKLDSRNLTDVLPWDR
RYFVTVKGNLYMSGYGFHERMSLVPLHSEPHGVVVALNCFELHGEHLLPQ
NVDFCDALKETSARHDFADLMNTTFGVVPAGRSPASYRLAEVMSAGAIPV
FVNRDYVRPFPERVDWSSFSFTFSPEEVERSMMATLKAVSSERLWDMQRR
SLEAFLDIFGEEPGYSRIAEVVIQELVRRVGYH*
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mRNA from alignment at H-elongata_contig56819:254..1626-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig56819.13131.1 ID=mRNA_H-elongata_contig56819.13131.1|Name=mRNA_H-elongata_contig56819.13131.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1373bp|location=Sequence derived from alignment at H-elongata_contig56819:254..1626- (Himanthalia elongata Himel1 dioecious)
GACGCGAAGCCTGAGATCGCCGAAAGCTCGGCCATGGACGCGTCCTCGAA
CACTCTGTCCTGCTACTATCGGAGCGGCTACGACTTCGCCGTCCCGCTGC
GGCATAAGTTGGACTCACGTAACCTCACCGATGTGCTCCCCTGGGATCGA
CGGTACTTCGTCACGGTGAAGGTGAGTGGGTGTTGTGCTGCTCGCTCTCG
GGAGGGCGCTTCTGAAAAATCAAAGAAGGGTCAAGCATGGGACATGCGCG
GGCCGGTTCTAATCCGCTACCATGGACTTTCATCTCCATCGCCATCATAG
TGTCGCTAACGAATGCATCTCCTAGCGACCATCATGGTGTCGCTAACGAA
TGCATCTCCTACCCACCACGATGGATTGAGTGGATGGCTTACACCTCGTT
CTGTGGCTGAATTCACCGCTCAGCTCACACACATCAGGGTGCGCTCAATA
GGCTTTCCGCTGAATGCGATGTGATCATTTTCTGCGGATCTATGCCCCAT
TTGCCTTCTCTGTCTCAAGCCACCTCCGCCTCTCATGTCTCGAACTCCGC
CTTCTCCGCGTAGCATCTAACAGGTCTCCCATGCCCCTGCTCCCCCCATA
CACGCACACACACACATGAATCATTGTCTCAACAGGGAAACCTGTATATG
TCCGGGTACGGCTTCCACGAGCGCATGAGCCTGGTCCCGCTCCACTCTGA
GCCCCACGGAGTCGTAGTGGCGTTGAACTGCTTCGAGCTTCACGGGGAAC
ACCTCCTCCCGCAGAACGTTGACTTCTGCGACGCGCTCAAGGAGACTTCG
GCGCGGCACGACTTCGCCGACCTCATGAACACCACGTTTGGGGTGGTGCC
CGCGGGGCGATCTCCGGCGTCCTACCGCCTCGCGGAGGTGATGAGCGCAG
GCGCCATACCGGTGTTCGTGAACAGGGACTACGTCCGGCCGTTTCCGGAG
AGGGTGGACTGGTCCTCCTTCTCCTTCACCTTCTCCCCCGAGGAGGTCGA
GAGGTCCATGATGGCAACGCTGAAGGCTGTCTCGTCCGAGAGGCTGTGGG
ACATGCAGGTGGGGAGAACCTTGGGGGCCCGGAGGAAAGGTGGGGGAGGG
GGGAGGAGGCGATGACATGTCCCCTTTCCCAATTAATTCGTTCGTCAGCT
TTCCCGTACCCCTTCCGATGGCATTTTTGCCTCTTCGGTGAAGTGTTGCG
CGTTCGCCCGATGATCGCCCTGTCCATCCCTCCTCCCCTGATCGATCTGT
ACTCTCAACACCCAGCGGAGATCATTGGAGGCGTTTCTTGACATTTTCGG
CGAGGAGCCAGGCTACAGCCGAATCGCCGAGGTCGTGATCCAGGAGCTCG
TGCGGCGAGTTGGATATCACTAG
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Coding sequence (CDS) from alignment at H-elongata_contig56819:254..1626-

>mRNA_H-elongata_contig56819.13131.1 ID=mRNA_H-elongata_contig56819.13131.1|Name=mRNA_H-elongata_contig56819.13131.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at H-elongata_contig56819:254..1626- (Himanthalia elongata Himel1 dioecious)
GACGCGAAGCCTGAGATCGCCGAAAGCTCGGCCATGGACGCGTCCTCGAA
CACTCTGTCCTGCTACTATCGGAGCGGCTACGACTTCGCCGTCCCGCTGC
GGCATAAGTTGGACTCACGTAACCTCACCGATGTGCTCCCCTGGGATCGA
CGGTACTTCGTCACGGTGAAGGACGCGAAGCCTGAGATCGCCGAAAGCTC
GGCCATGGACGCGTCCTCGAACACTCTGTCCTGCTACTATCGGAGCGGCT
ACGACTTCGCCGTCCCGCTGCGGCATAAGTTGGACTCACGTAACCTCACC
GATGTGCTCCCCTGGGATCGACGGTACTTCGTCACGGTGAAGGGAAACCT
GTATATGTCCGGGTACGGCTTCCACGAGCGCATGAGCCTGGTCCCGCTCC
ACTCTGAGCCCCACGGAGTCGTAGTGGCGTTGAACTGCTTCGAGCTTCAC
GGGGAACACCTCCTCCCGCAGAACGTTGACTTCTGCGACGCGCTCAAGGA
GACTTCGGCGCGGCACGACTTCGCCGACCTCATGAACACCACGTTTGGGG
TGGTGCCCGCGGGGCGATCTCCGGCGTCCTACCGCCTCGCGGAGGTGATG
AGCGCAGGCGCCATACCGGTGTTCGTGAACAGGGACTACGTCCGGCCGTT
TCCGGAGAGGGTGGACTGGTCCTCCTTCTCCTTCACCTTCTCCCCCGAGG
AGGTCGAGAGGTCCATGATGGCAACGCTGAAGGCTGTCTCGTCCGAGAGG
CTGTGGGACATGCAGGGAAACCTGTATATGTCCGGGTACGGCTTCCACGA
GCGCATGAGCCTGGTCCCGCTCCACTCTGAGCCCCACGGAGTCGTAGTGG
CGTTGAACTGCTTCGAGCTTCACGGGGAACACCTCCTCCCGCAGAACGTT
GACTTCTGCGACGCGCTCAAGGAGACTTCGGCGCGGCACGACTTCGCCGA
CCTCATGAACACCACGTTTGGGGTGGTGCCCGCGGGGCGATCTCCGGCGT
CCTACCGCCTCGCGGAGGTGATGAGCGCAGGCGCCATACCGGTGTTCGTG
AACAGGGACTACGTCCGGCCGTTTCCGGAGAGGGTGGACTGGTCCTCCTT
CTCCTTCACCTTCTCCCCCGAGGAGGTCGAGAGGTCCATGATGGCAACGC
TGAAGGCTGTCTCGTCCGAGAGGCTGTGGGACATGCAGCGGAGATCATTG
GAGGCGTTTCTTGACATTTTCGGCGAGGAGCCAGGCTACAGCCGAATCGC
CGAGGTCGTGATCCAGGAGCTCGTGCGGCGAGTTGGATATCACTAGCGGA
GATCATTGGAGGCGTTTCTTGACATTTTCGGCGAGGAGCCAGGCTACAGC
CGAATCGCCGAGGTCGTGATCCAGGAGCTCGTGCGGCGAGTTGGATATCA
CTAG
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