prot_H-elongata_contig55734.13001.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A6H5KI81_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI81_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.670e-33 Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 0
Query: 1 MGALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEILKHLGNA 84
MGALERG LHKKIV ECKK+ +CFHESCY +NG VKK++GSQTLKLVHDRY+GKPP VLQEL +M AA N EI KHLG A
Sbjct: 179 MGALERGNLHKKIVTECKKSTSCFHESCYAVNGTVKKVTGSQTLKLVHDRYKGKPPGNVLQELTADMKVAAQANREIPKHLGMA 262
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: D7FU80_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU80_ECTSI) HSP 1 Score: 127 bits (320), Expect = 1.980e-32 Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0
Query: 1 MGALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEILKHLGNA 84
MGALERG LHKKIV ECKK+ +CFHESCY +NG VKK++GSQTLKLVHDR++GKPP VLQEL +M AA N EI KHLG A
Sbjct: 181 MGALERGNLHKKIVTECKKSTSCFHESCYAVNGTVKKVTGSQTLKLVHDRFKGKPPGNVLQELTADMKVAAQANREIPKHLGMA 264
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A7S2BSJ8_9STRA (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSJ8_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 8.630e-14 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 1 MGALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEILKHLGNA 84
+ AL + + KKI+ +CKKA++C C NG VKKISG QTLKL H+RY+GK +T A + NPE+ +H+G A
Sbjct: 140 LDALTKAAIWKKIIIQCKKAHSC--PRCLAFNGTVKKISGVQTLKLTHERYKGKLAAHGAAAFQSNLTNAVNFNPEVKQHMGKA 221
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: B7G2E6_PHATC (DNA-directed RNA polymerase subunit n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2E6_PHATC) HSP 1 Score: 64.7 bits (156), Expect = 2.940e-10 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query: 3 ALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEI 77
AL + L KK+V +CKK C H C G NG VKKI+G TLK+VH+RY+G+ ++ L EL + + N ++
Sbjct: 92 ALSKAALFKKVVEKCKKVRVCPH--CGGHNGTVKKITGVPTLKIVHERYKGRNAEDELDELIANLEVSLKMNKDV 164
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A7S2Q4C6_9STRA (DNA-directed RNA polymerase subunit (Fragment) n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q4C6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.330e-10 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query: 3 ALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEI 77
AL + + KK++ +CKK TC + C NG VKK+ G+ TLK+VH++Y+G+ + L+EL E + A NPEI
Sbjct: 153 ALGKASIFKKVIEKCKKMRTCPY--CNKPNGTVKKVHGAPTLKIVHEKYKGRHMEGDLEELIESLQGAMQINPEI 225
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A7S4NGV3_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGV3_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.620e-9 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 11 KKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEILK 79
KK++ +CKKA C H C+ NG VKKISG TLK++H+RY+G+ ++ + +L + A N E ++
Sbjct: 167 KKVIDKCKKARACPH--CHASNGTVKKISGVPTLKIIHERYKGRHMEDEIDDLVHSLQNAMVSNGENIR 233
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A836CEF0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF0_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 6.700e-9 Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 1 MGALERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEM 67
+ AL R + KK+V +CKKA C + +C NG VKK+ G+ +LKL+H++Y+G+ ++E +M
Sbjct: 150 LDALGRAAVFKKVVTKCKKAVKCTNPACGAYNGTVKKVIGAASLKLIHEKYKGRHADGTMEEFRADM 216
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A7S1ZKV2_9STRA (DNA-directed RNA polymerase subunit n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZKV2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.330e-8 Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0
Query: 4 LERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEI 77
L + KK++ +CKK+ C H C+ NG VKKI+G+ TLK+VH+RY+G+ +E L + + N EI
Sbjct: 152 LAKAATFKKVIDKCKKSKACPH--CHEANGTVKKITGAPTLKIVHERYKGRHMEEEFNNLTISLQNSMRKNNEI 223
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: A0A448Z7A2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7A2_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.140e-8 Identity = 24/68 (35.29%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 11 KKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEIL 78
KK++ +CKK+ C + C +NG VKKI+G+ TLK+VH++++G+ ++ L +L + ++ A N +++
Sbjct: 163 KKVIEKCKKSKQCPY--CGAVNGTVKKITGAPTLKIVHEKFKGRHSEDELDQLMDNLSMAMDHNKDLI 228
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Match: B8C4M1_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4M1_THAPS) HSP 1 Score: 57.8 bits (138), Expect = 8.140e-8 Identity = 27/74 (36.49%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 4 LERGKLHKKIVAECKKANTCFHESCYGLNGAVKKISGSQTLKLVHDRYRGKPPKEVLQELAEEMTTAASGNPEI 77
L + + KK++ +CKKA+ C + C+ NG VKK+ G+ TLK++H+RY+G+ ++ +++L + + A N EI
Sbjct: 159 LGKASVFKKVLDKCKKAHQCPY--CHKPNGTVKKVHGAPTLKIIHERYKGRHMEDEVEDLLQSLQGAMITNLEI 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55734.13001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig55734.13001.1 ID=prot_H-elongata_contig55734.13001.1|Name=mRNA_H-elongata_contig55734.13001.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bpback to top |