prot_H-elongata_contig5477.12872.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5477.12872.1
Unique Nameprot_H-elongata_contig5477.12872.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length754
Homology
BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 1.010e-161
Identity = 346/848 (40.80%), Postives = 447/848 (52.71%), Query Frame = 0
Query:    2 GLLLGCLERSLPSRS-NGPGADSGLSPPTAQDSRGSSREDPKED--VLSERLVLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRAKFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHNDEQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAVDFIGPLLNQAFAERA-----------RALGEEMTVTVADRKYSAAGTTVNDEAKILAASDRSLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKALVRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTEDAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPLVWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEAGVFAFEWQPAEVLDDVDSKG---------------------------AHS----------------------------RRRL-----------------------RQRPLNPFHLDLAGFLQILIDVMVSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLDIFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNENRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQLRRACRKVPVASLLVDMDSRTGGLVLARYAHALDRLSSGAGGWGVA------GKLELRRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLEL 751
            GL++GCLER   S S N   + +G    ++ ++   +     +D   LSERL L + EIFSPKELH++ALEHLHAY+  +T+R VLT+LRRST++M   +R KFL A+++PA+ A  ++    A  + P A P        GL + S G       D D+                  P  +ED PS  AY+AAA AA+ A DFIGPL+ QA AE+A           R  G      VA     +     + E + ++ASD SL AY+GF+L+ALE+A ETS C                 +  +  A ++L R +ERLV +V+++P +DLRFVL H YR+++A+ +KR +   E  G+  E  +P      +V L E A+ GA+PWT RGVS +A+LVAC P+LR++WLPLVWSR  ERRLFLPHA+ LM   RSKRVA+KGLELAC+VA+R     PD  G FAF+W+P +  +++D  G                           AH+                            RR +                       R+R  +P HLDLAGFLQ+L+DVMVSCP+P LR RGH A+   L A DEASRFRVL RL+E CPWPNA GLLLD FR E+DRA R               + GI+                                             L +    +S F SA AG  VCEQLRRACR+ P+ASL+ DMDSRTGGL LARYAH LD +    GG G A      G+LELR P  L +  LLV+G LD LRG  IT  +AGPE FRLFILEDA QQCL EL
Sbjct:   83 GLVVGCLERFATSASSNNSDSITGTFEKSSDEAETLTTSRDADDCAALSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATKRVGLVAAAGDAP-AEP--------GLPQKSSG------SDADEXXXXXXXXXXXXXXXXXLPTADEDMPSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXX----XXXXXXXXGSEDNPPARESLARAQERLVGIVVDSP-LDLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRD-RSKRVANKGLELACFVAERLGG-FPDRTGAFAFDWEPGD--EEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSRRRLFDPHHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALR---------------QCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSS----SSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQEL 887          
BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 8.710e-135
Identity = 303/770 (39.35%), Postives = 399/770 (51.82%), Query Frame = 0
Query:    2 GLLLGCLERSLPSRS-NGPGADSGLSPPTAQDSRGSSREDPKED--VLSERLVLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRAKFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHNDEQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAVDFIGPLLNQAFAERA-----------RALGEEMTVTVADRKYSAAGTTVNDEAKILAASDRSLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKALVRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTEDAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPLVWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEAGVFAFEWQPAEVLDDVDSKGAHSRRRLRQRPLNPFHLDLAGFLQILIDVMVSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLDIFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNENRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQLRRACRKVPVASLLVDMDSRTGGLVLARYAHALD-----RLSSGAGGWGVA-GKLELRRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLEL 751
            GL++GCLER   S S N  G+ +G    ++ ++   +     +D   LSE L L + EIFSPKELH++ LEHLHAY+  +TVR VLT+LRRSTERM   +R+KFL A+++PA++A  ++    A  + P A P        GL++ S G   +                         P  + D PS  AY+AAA AA+ A DFIGPL+ QA AERA           R  G      VA     +     + E + ++ASD SL AY+GF+L+ALE+A ETS C               T +  + AA ++L R EERL+ +V+++P +DLRF L H  R++YA+ +KR + + E  G+  +  +P      +V LAE A+ GA+PWT RGVS +A+LVAC P+LR++WLPLVWSR  ERRLFLPHA+VLM   RS+RVA+KGLELAC+VA+R     PD +G +AF+W+P +  +++D  G                    G  ++L+DVMVSCP+P LR RGH A+   LS  DEASRFR+L RL+E CPWPN                                                                                                          L RACR+ P+ASL+ DMDSRTGGL LARYAH LD     R  SG    G A G+L LR P  L +  LLV+G LD LRG  IT  +AGPE FRLFILEDA QQCL EL
Sbjct:   83 GLVVGCLERFATSPSPNSSGSVTGTFEKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAKRVGLVAAAGDAP-AEP--------GLRQKSSG--SDXXXXXXXXXXXXXXXXXXXXXXXLLPTADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXX----XXXXXXXTGSEDNPAAGESLARAEERLIGIVVDSP-LDLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVGLAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRD-RSRRVANKGLELACFVAERLGG-FPDRSGAYAFDWEPGD--EEIDGAGDDXXXXXXWNG--------GGRQEVLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN----------------------------------------------------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQEL 718          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB3_9PHAE1.010e-16140.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P6_ECTSI8.710e-13539.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013877YAP-binding/ALF4/GlomulinPFAMPF08568Kinetochor_Ybp2coord: 489..564
e-value: 7.4E-9
score: 34.7
IPR019516Glomulin/ALF4PANTHERPTHR15430FKBP-ASSOCIATED PROTEINcoord: 375..561

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5477contigH-elongata_contig5477:5694..10168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5477.12872.1mRNA_H-elongata_contig5477.12872.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5477 5649..10432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5477.12872.1 ID=prot_H-elongata_contig5477.12872.1|Name=mRNA_H-elongata_contig5477.12872.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=754bp
MGLLLGCLERSLPSRSNGPGADSGLSPPTAQDSRGSSREDPKEDVLSERL
VLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRA
KFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHND
EQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAV
DFIGPLLNQAFAERARALGEEMTVTVADRKYSAAGTTVNDEAKILAASDR
SLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKAL
VRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTE
DAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPL
VWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEA
GVFAFEWQPAEVLDDVDSKGAHSRRRLRQRPLNPFHLDLAGFLQILIDVM
VSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLD
IFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNE
NRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQL
RRACRKVPVASLLVDMDSRTGGLVLARYAHALDRLSSGAGGWGVAGKLEL
RRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLE
LLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013877YAP-bd/ALF4/Glomulin
IPR019516Glomulin/ALF4