mRNA_H-elongata_contig53893.12754.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 266 bits (681), Expect = 3.520e-82 Identity = 139/273 (50.92%), Postives = 192/273 (70.33%), Query Frame = 1
Query: 28 MVHALNSKVKIPHRRDVVNRMQQILVALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNL-TEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 840
MV ALN + K+P RR++++RM+ + AL+ A M+ +++V++TTDG TSR NESY+S T ++D EWK+ L L CAK G+TTGEDL A + MV+ HDLTGRV+ TDCEPSM+KAGR L + +H+GC+ HR+E TS VF+ + ++ LAR+LV R KSSQ A RL +LCG + + PL V+QDVET+WWST +M RL+YL +A++LHES+D + PLL DW VL ++EP+L PFM QK LE + VTGS+ + + EL
Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAEL 272
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 244 bits (624), Expect = 6.710e-74 Identity = 134/276 (48.55%), Postives = 182/276 (65.94%), Query Frame = 1
Query: 19 FRDMVHALNSKVKIPHRRDVVNRMQQILVALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNL-TEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 840
F +V LN K + P RR +V +M++I L+ A M+ +YV++TTDG TSR+NESY+S T ++D W++ L L+C K GST GEDL I +M++ H LTGRV TDCEPSMVKAGR L H+GC+ HR+E TS VF+ + ++A AR++V R +SSQ + RL G + + PL V+QDVET+WWS+ +M ERL+YL +A++LHES DNI P+L DW VL ++EP+L PFM QK LE + VTGS+ VP I EL
Sbjct: 34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGEL 308
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 243 bits (619), Expect = 9.070e-74 Identity = 125/281 (44.48%), Postives = 185/281 (65.84%), Query Frame = 1
Query: 1 VVDNTFFRDMVHALNSKVKIPHRRDVVNRMQQILVALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 840
+V+N F +MV L S+ +PH+R + +++ + L +T ++V++T+DG TS +N++Y+ FT ++ + +V L + C K G TTGEDL +++AM+ + LT R V TDCEPSMVKAGR L E TH+GC CHR+E +TS F PGV K++ALAR +VTR SSQA+DRL+++ V + +V+QDVET+WWST++ RL+ LRR + HE +D+I PLL+ DW VL+++EP+ PF+ QK E S +VT SLV+P I +L
Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.730e-62 Identity = 116/237 (48.95%), Postives = 158/237 (66.67%), Query Frame = 1
Query: 133 MTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 840
MT ++V++T+DG T +N++Y+SFT ++ + +V L L C K T GEDL +++AM+ + LTGR V TDCE SMVKAGR L E TH+GC CHR+E +TS F PGV K++ALAR +VTR T SSQA+DRL+++C V + V+QDVET+WWST+ RL+ LRR + HE +D+ PLL+ DW VL+++E +L PFM QK LE S VT LV P I +L
Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADL 237
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.340e-54 Identity = 102/223 (45.74%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 175 SRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 840
S +N++Y++FT ++ + +V L L K G TTGEDL +++AM+ + LTGR V TDCEP MVKAGR L E +H+GC CHR E +TS F PGV K++AL R +VTR T SSQA++RL+++C V + +V+QDVET+WWST +D+I PLL DW VL+++EP+L PFM QK LE S VT SLV I +L
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI) HSP 1 Score: 120 bits (300), Expect = 5.350e-27 Identity = 78/280 (27.86%), Postives = 146/280 (52.14%), Query Frame = 1
Query: 1 VVDNTFFRDMVHALNSKVKIPHRRDVVNRMQQILV--ALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESL-DNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNNV-TGSLVVPL 828
VV++T FR+ + ALN ++P+R + + L L + ++T + +TTD TS E+YI TA F+DE +K+ +L+L C+K + S ED+ +++ + + + ++++ +D +M KA + L E + H GC H I + ++ + + +V +S A ++L T PL++IQ+V+T+W ST+ M ER V L A++ ++ D +P L +W +L+ + +L P+ V K + + T ++V+PL
Sbjct: 132 VVEDTGFRNFISALNPSYELPNRHTISKTLLPALYEECLNDTKKKILTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPL 408
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: UPI001F5EA1FC (E3 SUMO-protein ligase ZBED1-like isoform X1 n=3 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5EA1FC) HSP 1 Score: 109 bits (273), Expect = 2.350e-23 Identity = 89/292 (30.48%), Postives = 151/292 (51.71%), Query Frame = 1
Query: 1 VVDNTFFRDMVHALNSKVKIPHRRDVVNRM---------QQILVALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRL---QELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNI---VPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNNV-TGSLVVPL 828
+V+++ FR VHALN +IP RR V N M +++ LQG + +TTD TS +NESY++ T F++E++++ +++L C+ G+ T +L+ ++ + L G++++ TD P++ A + + + H GC H + V V++ +++V +SS A +RL Q+ G V I L IQD+ T+W ST M ER+V L AV++ +L N +P L +W + L +L PF V ++L + + TGSLV+ L
Sbjct: 159 IVNDSGFRSFVHALNPAYEIPSRRTVTNVMLPAAYAEANEKVQQKLQGIKT-------ICLTTDCWTSASNESYMAVTGHFINEQFRLQSVLLECSHFSGAHTSSNLSTALIKITDKFSLGGKILMVVTDNAPNIKNAISTILK---WKHFGCYAHTLNLVVQDALK--NVQEVHQKVKTIVGFFKRSSSATERLLTCQQNSGKVNIKKL--IQDLPTRWNSTLFMLERIVELSEAVKITVALCNRPTDLPSLSNDEWEICSELCSILKPFEQVSRQLSAEDYPTGSLVIVL 436
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: J9JWR9_ACYPI (BED-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JWR9_ACYPI) HSP 1 Score: 101 bits (251), Expect = 2.200e-20 Identity = 83/263 (31.56%), Postives = 136/263 (51.71%), Query Frame = 1
Query: 40 LNSKVKIPHR--RDVVNRMQQILVALQGSA----ATMMTSQY-VSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSL-VFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAV-ELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNN 801
+N + KI H+ + +V +QQ + L +MT+ + V +TTDG TS NESYI TA F+DE + ++ L C K E T ++L ++ V+ ++ +V +D ++V A R+ F HV C H I V + ++ ++K + +S+V +SS A +LQE+ +G+PPL++ QDV T+W STH M +R+V ++ AV L V L V+W ++E +L F V K++ S
Sbjct: 472 VNHQKKIDHQLVKMIVKGVQQHVPLLYHQTHEKIQVLMTNCFAVCLTTDGWTSIKNESYIGVTAHFIDENASLQSVCLGCEKFEERHTSDNLALYLKNTVREWNIENKVAAVVSDNASNIVGAIRDCN----FRHVPCFAHSINLVVQQGLKNISHIQKKV---KSIVEHFKRSSHAQSKLQEIQQQMGLPPLKLKQDVVTRWNSTHDMFKRIVEIKDAVVSTLAILQCDVEQLTVVEWQIVEWSTNILQIFAEVTKEISSER 727
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: UPI001C8ABA7E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=UPI001C8ABA7E) HSP 1 Score: 97.1 bits (240), Expect = 5.490e-19 Identity = 89/290 (30.69%), Postives = 147/290 (50.69%), Query Frame = 1
Query: 1 VVDNTFFRDMVHALNSKVKIPHR---RDVVNRMQQILVALQGSAATMMTS-QYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTAS--IEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPV---DWAVLEMLEPVLLPFMYVQKKLESNNV-TGSLVVPLICEL 840
+V++ FRD++ ++ K KIP R R+V+ + ++ L+ + QYV++TTDG TSRANE+YI+ T FVD+++++V+ VLS A T L + I ++ L +VV TD + +M KA +L K H C H I + + + +K + +++V +SS A + +E + PL +IQ+V T+W S M ER++ A+ + SL P + +VLE L +L PF K + T SLV+P++CE+
Sbjct: 13 MVEDEGFRDLMQHMDPKYKIPSRTFFREVM--LPKLYKDLKKDLECELEDVQYVAITTDGWTSRANEAYITVTCHFVDKKFQLVSAVLSTASLLTPTNHSALNIADTIRQVLNEWKLLHKVVTIVTDNDATMKKACEHLQMK----HFPCFAHTINLLVQEILKLEIIKPILTKCKTVVAFMKRSSTAMTKFKE--AQMVTDPLGLIQEVPTRWNSAFQMMERILKTNGALSI--SLLGTAKAPAPFSAKEISVLEELCSLLRPFEKATKLISGGKYPTMSLVIPIVCEM 292
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A4Y2KUX9_ARAVE (Zinc finger BED domain-containing protein 4 n=5 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2KUX9_ARAVE) HSP 1 Score: 96.7 bits (239), Expect = 7.390e-19 Identity = 86/286 (30.07%), Postives = 144/286 (50.35%), Query Frame = 1
Query: 1 VVDNTFFRDMVHALNSKVKIPHRRDVVNRM-----QQILVALQGSAATMMTSQYVSMTTDG*TSRANESYISFTAVFVDEEWKMVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMAL--ARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESL-DNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNN-VTGSLVVPLI 831
+V++ FR V ALN ++P R +VN + +Q+ ++ + T+ + +TTD TS NES++S TA ++DEE+KM +L+L + T +L + +V+ +L G+++V TD ++V A +N + + H+GC H I +L+ V+ S + +S+V +S+ A RL E T G ++IQDV T+W ST M ER V L + +L D +P L +W L++L L PF N T SL++ ++
Sbjct: 163 IVNDRGFRAFVSALNPSYRLPSRDTIVNTLLPAIYEQVSHDVRQACCTI---KKACLTTDCWTSANNESFMSVTAHYLDEEFKMNSLLLDVSILFVPHTSANLASETLKIVENWNLQGKILVTVTDNASNIVGAIKNGLK---WQHLGCFAHTI----NLILKDAQVEFSCLVEKVKSIVCHFKRSTAANSRLMECQVTSGKDAKKLIQDVPTRWNSTFYMLERFVELESCIRTTVALLDADLPHLTAGEWKTLQLLCKALKPFEDATTMASGENYATASLIIIIV 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53893.12754.1 >prot_H-elongata_contig53893.12754.1 ID=prot_H-elongata_contig53893.12754.1|Name=mRNA_H-elongata_contig53893.12754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKback to top mRNA from alignment at H-elongata_contig53893:2496..3335- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53893.12754.1 ID=mRNA_H-elongata_contig53893.12754.1|Name=mRNA_H-elongata_contig53893.12754.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=840bp|location=Sequence derived from alignment at H-elongata_contig53893:2496..3335- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53893:2496..3335- >mRNA_H-elongata_contig53893.12754.1 ID=mRNA_H-elongata_contig53893.12754.1|Name=mRNA_H-elongata_contig53893.12754.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig53893:2496..3335- (Himanthalia elongata Himel1 dioecious)back to top |