prot_H-elongata_contig53841.12742.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53841.12742.1
Unique Nameprot_H-elongata_contig53841.12742.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A836CKL8_9STRA (DHC_N1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.170e-17
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLKK 57
            M+I K G+L VN+SE+LVTLLREVRQL+ELGH++P +ISKA  E E +YRYG+MLKK
Sbjct:  580 MEISKAGVLDVNFSEKLVTLLREVRQLAELGHTVPPRISKAASEAERFYRYGIMLKK 636          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: D8LN03_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN03_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 5.520e-17
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVI-EGEAYYRYGVML 55
            MDIDKRGILVVNYSERLVTLLREVRQLSELGH+IPSKISK V+  G+A + +   L
Sbjct:  636 MDIDKRGILVVNYSERLVTLLREVRQLSELGHAIPSKISKTVLPSGQAVFFFAASL 691          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A8J2SHJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHJ0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.530e-14
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLKK 57
            M+I + G+L+VNYS RLV LLREVRQL+ELG ++P  I +A  +GE YYR+GV+LKK
Sbjct:  568 MEISQEGLLIVNYSSRLVQLLREVRQLTELGVTVPDSIKQAAKDGEQYYRFGVVLKK 624          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A7S1CH85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH85_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.220e-14
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLKK 57
            M+ D  G ++VNYSE LV LLREVRQLSELG ++P K+++A  + E YYRYGV LKK
Sbjct:  104 MEFDVDGNMIVNYSESLVILLREVRQLSELGMTLPPKVARAARDAETYYRYGVQLKK 160          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A485LI71_9STRA (Aste57867_21689 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI71_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.740e-13
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHS----IPSKISKAVIEGEAYYRYGVMLKK 57
            M+IDK G L VNYSE LVTLLR+VRQL ELGH     +P ++ +   E E YYRYGV LKK
Sbjct:  552 MEIDKSGNLTVNYSEFLVTLLRDVRQLMELGHESGKWVPPRVLEVATEAEKYYRYGVTLKK 612          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A7E4URM5_PANRE (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4URM5_PANRE)

HSP 1 Score: 70.9 bits (172), Expect = 6.470e-13
Identity = 34/57 (59.65%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 MDIDK-RGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLK 56
            M +DK RG+L VNYS+RLV LLREVRQ+  LG+++PSKI + V  GE +YR+G++LK
Sbjct:  542 MVLDKDRGVLRVNYSDRLVRLLREVRQVQSLGYTVPSKIQQCVTTGEQFYRHGILLK 598          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A2G9U5H7_TELCI (DHC_N1 domain-containing protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9U5H7_TELCI)

HSP 1 Score: 68.9 bits (167), Expect = 1.910e-12
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    5 KRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLK 56
            KRG L VNYS+RL+ LL+EVRQL+ LG +IPSKI   V +GE +YRYGV+LK
Sbjct:  170 KRGTLNVNYSDRLLKLLKEVRQLASLGLNIPSKIINCVNQGEKFYRYGVVLK 221          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A2C9LQ20_BIOGL (DHC_N1 domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LQ20_BIOGL)

HSP 1 Score: 65.9 bits (159), Expect = 2.160e-12
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    5 KRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLK 56
            K G L VNYS+RLVTLLREVRQLS +G S+P+KI +     + +YRYGV+LK
Sbjct:   72 KDGKLRVNYSDRLVTLLREVRQLSSIGFSVPAKIQQVAETAQKFYRYGVILK 123          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A2G9U8R8_TELCI (Dynein heavy chain, region 1 (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9U8R8_TELCI)

HSP 1 Score: 68.9 bits (167), Expect = 3.060e-12
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    5 KRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYRYGVMLK 56
            KRG L VNYS+RL+ LL+EVRQL+ LG +IPSKI   V +GE +YRYGV+LK
Sbjct:  543 KRGTLNVNYSDRLLKLLKEVRQLASLGLNIPSKIINCVNQGEKFYRYGVVLK 594          
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Match: A0A5D6XL42_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL42_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.090e-12
Identity = 39/68 (57.35%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    1 MDIDKRGILVVNYSERLVTLLREVRQLSELGHS-----------IPSKISKAVIEGEAYYRYGVMLKK 57
            M IDK G LVVNYSE LVTLLR+VRQL+EL              +P K+ K   E E YYRYGVMLKK
Sbjct:  583 MQIDKNGDLVVNYSEFLVTLLRDVRQLTELAAQHQSTASKKDEWVPPKVRKVAEEAEKYYRYGVMLKK 650          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53841.12742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKL8_9STRA1.170e-1768.42DHC_N1 domain-containing protein n=1 Tax=Tribonema... [more]
D8LN03_ECTSI5.520e-1776.79Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A8J2SHJ0_9STRA1.530e-1461.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1CH85_9STRA7.220e-1461.40Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A485LI71_9STRA4.740e-1360.66Aste57867_21689 protein n=1 Tax=Aphanomyces stella... [more]
A0A7E4URM5_PANRE6.470e-1359.65Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Panagre... [more]
A0A2G9U5H7_TELCI1.910e-1265.38DHC_N1 domain-containing protein n=1 Tax=Teladorsa... [more]
A0A2C9LQ20_BIOGL2.160e-1261.54DHC_N1 domain-containing protein n=1 Tax=Biomphala... [more]
A0A2G9U8R8_TELCI3.060e-1265.38Dynein heavy chain, region 1 (Fragment) n=1 Tax=Te... [more]
A0A5D6XL42_9STRA3.090e-1257.35Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
IPR013594Dynein heavy chain, domain-1PFAMPF08385DHC_N1coord: 5..56
e-value: 3.2E-7
score: 29.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53841contigH-elongata_contig53841:3075..3397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53841.12742.1mRNA_H-elongata_contig53841.12742.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53841 3048..3397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53841.12742.1 ID=prot_H-elongata_contig53841.12742.1|Name=mRNA_H-elongata_contig53841.12742.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MDIDKRGILVVNYSERLVTLLREVRQLSELGHSIPSKISKAVIEGEAYYR
YGVMLKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013594Dynein_heavy_dom-1