mRNA_H-elongata_contig53469.12690.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A6H5JJ25_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ25_9PHAE) HSP 1 Score: 319 bits (817), Expect = 2.860e-98 Identity = 161/180 (89.44%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTYD 540
VCVYGATGAGKSSLLMACLQELVTV+G+SLMNGSV+YASQRAWIQNATVRDNILFG +DP RY+MVLEACAL+SDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYAD+DIVLLDDVLSAVDAHVGKHIFD+CIR++LK KTVVLVTHQV MSA YADKIVVLD +GTIKEQGTY+
Sbjct: 758 VCVYGATGAGKSSLLMACLQELVTVEGRSLMNGSVSYASQRAWIQNATVRDNILFGCAFDPRRYDMVLEACALQSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADSDIVLLDDVLSAVDAHVGKHIFDKCIRKVLKLKTVVLVTHQVNMSAPYADKIVVLDGDGTIKEQGTYE 937
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: D7G0B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 319 bits (817), Expect = 7.250e-98 Identity = 161/180 (89.44%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTYD 540
VCVYGATGAGKSSLLMACLQELVTV+G+SLMNGSV+YASQRAWIQNATVRDNILFG +DP RY+MVLEACAL+SDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYAD+DIVLLDDVLSAVDAHVGKHIFD+CIR++LK KTVVLVTHQV MSA YADKIVVLD +GTIKEQGTY+
Sbjct: 732 VCVYGATGAGKSSLLMACLQELVTVEGRSLMNGSVSYASQRAWIQNATVRDNILFGCAFDPRRYDMVLEACALESDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADSDIVLLDDVLSAVDAHVGKHIFDKCIRKVLKFKTVVLVTHQVNMSAPYADKIVVLDGDGTIKEQGTYE 911
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A6H5K4L0_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4L0_9PHAE) HSP 1 Score: 247 bits (631), Expect = 1.440e-72 Identity = 119/177 (67.23%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQG 531
VCVYG TG GKSSLL++ L E+ V+G +NG+VAYA+QRAWIQNAT+RDN+LFGSPYDP RY VL ACAL +DL++L++GDQTEIGEKG+NLSGGQQQRVSLARAVYA D+ LLDDVLSAVDAHVG+HIF C+R +L+ K VVLVTHQV M+A YA+++ ++ +G + E G
Sbjct: 746 VCVYGPTGCGKSSLLLSLLGEVRRVEGTVEINGTVAYAAQRAWIQNATLRDNVLFGSPYDPERYARVLSACALTADLDLLEAGDQTEIGEKGINLSGGQQQRVSLARAVYAQADVYLLDDVLSAVDAHVGEHIFKHCVRGMLRDKAVVLVTHQVPMTARYANRVALMSVDGRMVEVG 922
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A835YUJ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ8_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.650e-69 Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRV-------------SLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTY 537
VCVYG TG+GKS+LLMA LQEL+T +GK+LMNGSVAYASQ+AWIQNATVRDNILFG P+DP+RY VLEACALKSDL IL+ + +I + L +Q + SLARAVY D DIVLLDDVLSAVDAHVGKHIF+RCI +LK KTV+LVTHQV M+A AD+I+V +T+GTI+E GTY
Sbjct: 509 VCVYGPTGSGKSTLLMAVLQELITEKGKALMNGSVAYASQKAWIQNATVRDNILFGRPFDPVRYEQVLEACALKSDLTILEVSNFNDIASVSLLLRNLKQAKTLELMAAFTVIVLCSLARAVYNDADIVLLDDVLSAVDAHVGKHIFERCITGVLKGKTVLLVTHQVNMTAPKADRIIVFNTDGTIRETGTY 700
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A7S3XN05_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN05_HETAK) HSP 1 Score: 218 bits (554), Expect = 1.040e-68 Identity = 111/177 (62.71%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQG 531
V VYG TG GKSSLLMA L E+ G+ + G+VAYA+Q+AWIQNATVR+NILFG P D +RY + ACAL+ DL +L+ GD TEIGEKGVNLSGGQQQRV+LARAVYAD D+ LLDDVLSAVDAHVG+H++ C+ L+ KT VLVTHQV ++ AD +V++ G I EQG
Sbjct: 33 VVVYGPTGCGKSSLLMALLGEIGRRAGEVAVVGTVAYAAQQAWIQNATVRENILFGRPPDEVRYRAAVGACALRRDLRLLEGGDLTEIGEKGVNLSGGQQQRVALARAVYADADVYLLDDVLSAVDAHVGEHLWRECLCGALRGKTRVLVTHQVGLTVREADHLVLMGEGGVILEQG 209
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A1E1WY53_9ACAR (Putative multidrug resistance-associated protein/mitoxantrone resistance protein (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1WY53_9ACAR) HSP 1 Score: 204 bits (520), Expect = 7.480e-63 Identity = 105/180 (58.33%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 7 VYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCI--RRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTYD 540
+ G+ G+GKSS+L A L ++V ++G +NGSVAY Q+AWIQNA+V++NI FG P+D RY V+EACALK DL+IL GD TE+GEKG+NLSGGQ+QR+SLARAVY+ +DI DD LSAVD+HVGKHIFD+ I + LL+ KT VLVTH++A+ D ++VL +G I E GTYD
Sbjct: 77 IVGSVGSGKSSMLSAFLGDMVKMKGSVTINGSVAYCPQQAWIQNASVKNNITFGQPFDRERYEQVIEACALKQDLDILPGGDDTEVGEKGINLSGGQKQRISLARAVYSGSDIYFFDDPLSAVDSHVGKHIFDKVIGPKGLLRKKTRVLVTHRLAVLPQ-VDMVLVLG-DGKISEVGTYD 254
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A7S2H7W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H7W9_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.640e-62 Identity = 102/168 (60.71%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 4 CVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDT 507
CV GATG+GKS LL A + E+ G G++AY +Q AWIQNATV+DNILFGSP+D +Y +L+ACAL DL+IL +GDQTEIGEKG+NLSGGQ+QRV++ARAVYAD DI L DD LSAVD+ V +HIFD CI++LL+ K V+LVTH + + + AD+IV+LD+
Sbjct: 179 CVVGATGSGKSGLLSAMIGEVEPKSGTLATRGTIAYTAQVAWIQNATVKDNILFGSPFDEAKYEAILDACALLDDLKILPAGDQTEIGEKGINLSGGQKQRVAIARAVYADADIYLFDDCLSAVDSQVARHIFDHCIQKLLRHKAVLLVTHNLQLIPN-ADQIVLLDS 345
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A7S4I0M5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I0M5_9EUKA) HSP 1 Score: 202 bits (514), Expect = 4.030e-61 Identity = 108/179 (60.34%), Postives = 128/179 (71.51%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCIRRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTY 537
V V G G+GKSSLL A L ++ + G +NG +AYA+Q AWIQNAT+RDNILFG D RY + C L+SDL++L GDQTEIGEKG+NLSGGQ+QRVSLARAVY D D+ LLDD LSAVDAHVG IFD+CI LK KT +LVTHQ+ AD+I+VL G I E GTY
Sbjct: 37 VAVCGGVGSGKSSLLSAILGDIDCITGTVEVNGRIAYAAQNAWIQNATIRDNILFGEEEDRKRYKRAIRVCQLESDLDVLSDGDQTEIGEKGINLSGGQKQRVSLARAVYNDADVYLLDDPLSAVDAHVGLAIFDQCIVDALKGKTRILVTHQLQHMPK-ADRIIVLK-EGKITELGTY 213
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A226DMS4_FOLCA (Multidrug resistance-associated protein 1 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DMS4_FOLCA) HSP 1 Score: 213 bits (542), Expect = 1.340e-60 Identity = 112/181 (61.88%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCI--RRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTY 537
V + G GAGKSSLL A L EL + GK GS+AY SQ+AWIQNATVR+N+LFG P+DP +Y+ V++ACALK DLEIL +GD+TEIGEKG+NLSGGQ+QRVSLARA Y+++DI LLDD LSAVD+HVGKHIFD + + +LK KT +LVTH +A D IVVL +G + E GTY
Sbjct: 671 VAIVGTVGAGKSSLLAAMLGELERLNGKVNTKGSIAYVSQQAWIQNATVRNNVLFGKPFDPTKYDKVIDACALKPDLEILAAGDKTEIGEKGINLSGGQKQRVSLARAAYSNSDIYLLDDPLSAVDSHVGKHIFDAVLGPKGVLKRKTRILVTHGIAYLPQ-VDNIVVLK-DGEVSEMGTY 849
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Match: A0A1B6I9H9_9HEMI (ABC transporter domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6I9H9_9HEMI) HSP 1 Score: 196 bits (499), Expect = 1.880e-60 Identity = 108/181 (59.67%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 1 VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRDNILFGSPYDPLRYNMVLEACALKSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADTDIVLLDDVLSAVDAHVGKHIFDRCI--RRLLKSKTVVLVTHQVAMSAHYADKIVVLDTNGTIKEQGTY 537
V V GA G+GKSSL+ A L E+ + G G +AY Q+AWIQNATVRDNILFG YD RY+ ++ CALKSD ++L GD TEIGEKG+NLSGGQ+QRVSLARAVY D D LLDD LSAVD+HVG+HIFD I + LK KT VLVTH V H D IVV+ G I E GT+
Sbjct: 38 VAVVGAVGSGKSSLISAFLGEMDKISGYVNTTGKIAYVPQQAWIQNATVRDNILFGVSYDSKRYHRAVQNCALKSDFDMLPGGDSTEIGEKGINLSGGQKQRVSLARAVYNDADTYLLDDPLSAVDSHVGRHIFDNVIGPKGQLKKKTRVLVTHGVTF-LHQVDVIVVMKA-GEISEMGTF 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53469.12690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53469.12690.1 >prot_H-elongata_contig53469.12690.1 ID=prot_H-elongata_contig53469.12690.1|Name=mRNA_H-elongata_contig53469.12690.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp VCVYGATGAGKSSLLMACLQELVTVQGKSLMNGSVAYASQRAWIQNATVRback to top mRNA from alignment at H-elongata_contig53469:916..3853+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53469.12690.1 ID=mRNA_H-elongata_contig53469.12690.1|Name=mRNA_H-elongata_contig53469.12690.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2938bp|location=Sequence derived from alignment at H-elongata_contig53469:916..3853+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53469:916..3853+ >mRNA_H-elongata_contig53469.12690.1 ID=mRNA_H-elongata_contig53469.12690.1|Name=mRNA_H-elongata_contig53469.12690.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig53469:916..3853+ (Himanthalia elongata Himel1 dioecious)back to top |