prot_H-elongata_contig5346.12688.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5346.12688.1
Unique Nameprot_H-elongata_contig5346.12688.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.610e-17
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    1 WDGGDCCRCTCDDDKYICGREGFLCIDPEAVDNGTTTCEQI--IPSPCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIML 86
            +DGGDCC C+C      C R  F C+DP A +     CE    +  PC  D ++ W+VE++TQ +ALA AVNCS G FEVEWRG +++
Sbjct:   89 YDGGDCCVCSCQ--GVNCMRTSFECLDPSANEE-LHDCEPSPQLALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVV 173          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.310e-16
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    1 WDGGDCCRCTCDDDKYICGREGFLCIDPEAVDNGTTTCEQIIPS--PCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIML 86
            +DGGDCC C+C      C    F C+DP A +     CE   P   PC  D ++ W+VE++ Q +ALA AVNCS G FEVEWRG +++
Sbjct:  148 YDGGDCCVCSCQ--GVNCMTTSFECLDPSASEE-LHDCEPSPPLALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVV 232          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 5.840e-16
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 WDGGDCCRCTCDDDKYIC-GREGFLCIDPEAVDNGTTTCEQIIPSPCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIML 86
            +DGGDCC C+C   +++C GR  F C+DP      TT C     + C  D  R+W+VENT     LA A+NC+ G F+VEWRGS+++
Sbjct:   72 YDGGDCCECSCQPGQFMCLGR--FDCLDPSF---NTTECVTNTTA-CAPDLSREWLVENTADAIELANAINCTGGTFDVEWRGSVLV 152          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.490e-15
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 WDGGDCCRCTCDDDKYIC-GREGFLCIDPEAVDNGTTTCEQIIPSPCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIML 86
            +DGGDCC C+C   +Y+C GR  F C+DP      TT C     + C  D  R+W+VE+T     LA A+NC+ G F+VEWRGS+++
Sbjct:  178 YDGGDCCECSCQPAQYMCLGR--FDCLDPSF---NTTECVTNTTA-CSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIV 258          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.810e-15
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    1 WDGGD----------CCRCTCDDDKYICGREGFLCIDPEAVDNGTTTCEQIIPS--PCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDT 88
            +DGGD          CC CTC     +C    F C+DP+A D+    CE   P+  PC  + ++ W+V+++ Q +ALA AVNCS G FEVEWRG++++++
Sbjct:   90 YDGGDVSLVACSSLLCCYCTCS--GALCQSVTFDCLDPDA-DDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVES 186          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 5.580e-13
Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    1 WDGGDCCRCTCDDDKYICGREGFLCIDPEAVDNGTTTCEQIIPS--PCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDTEI 90
            +DGGDCC C+C     +CG     C+DP A D     C    P   PC  + ++ W+V+   +  ALA AVNCS G FEVEW G+++++  I
Sbjct:  250 YDGGDCCICSCS--GTLCGGLAD-CLDPSAGDE-FYECSPPSPEALPCSAEVQQTWVVDEQEEAHALAAAVNCSGGSFEVEWSGTVVMEMPI 337          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.110e-10
Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   18 CGREGFLCIDPEAVDNGTTTCEQIIPS--PCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDTEI 90
            C    F C+DP +  NG   C++  P+  PC  + ++ W+V ++ +  ALA AVNCS G FEVEWRGS+++++ I
Sbjct:   10 CYSSLFDCLDPGSS-NGFYECQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPI 83          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 9.930e-10
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    9 CTCDDDKYICGREG-----FLCIDPEAVDNGTTTCEQ--IIPSPCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDTEI 90
            C  +++   CG +G       C+DP A +     CE   I  +PCP D +  W+V ++ Q  ALA AVNCS G FEVEW G+++++  I
Sbjct:  174 CNPENNIASCGYDGGDGGELDCVDPSAPEE-LYECEAPPITTTPCPADSEWNWVVGDSEQALALALAVNCSGGSFEVEWVGTVVVNETI 261          
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Match: A0A6H5K1P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P8_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-8
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   25 CIDPEAVDNGTTTCEQIIPS--PCPTDGKRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDTEI 90
            C+DP A D     C Q  P   PC  + ++ W+++   Q  ALA AVNCS G F+VEWRG+++++  I
Sbjct:   31 CLDPSAGDE-FYECSQPSPEALPCSLEVQQTWVLDEQEQAHALAAAVNCSGGSFQVEWRGTVVMEIPI 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5346.12688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G2X5_ECTSI2.610e-1746.59Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE2.310e-1645.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP6_9PHAE5.840e-1644.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV90_ECTSI1.490e-1544.83Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE3.810e-1540.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTI5_ECTSI5.580e-1340.22Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FTL7_ECTSI1.110e-1041.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSC0_ECTSI9.930e-1038.20Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K1P8_9PHAE1.200e-841.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5346contigH-elongata_contig5346:2702..2974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5346.12688.1mRNA_H-elongata_contig5346.12688.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5346 2702..2975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5346.12688.1 ID=prot_H-elongata_contig5346.12688.1|Name=mRNA_H-elongata_contig5346.12688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
WDGGDCCRCTCDDDKYICGREGFLCIDPEAVDNGTTTCEQIIPSPCPTDG
KRKWIVENTTQVRALAEAVNCSDGRFEVEWRGSIMLDTEIT
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