mRNA_H-elongata_contig11608.1267.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X4A8_9PHAE (Putative LOV domain-containing protein n=5 Tax=Sargassum TaxID=3015 RepID=A0A126X4A8_9PHAE) HSP 1 Score: 492 bits (1267), Expect = 1.240e-160 Identity = 280/374 (74.87%), Postives = 304/374 (81.28%), Query Frame = 3
Query: 132 AVTPAAALLAKAEPVEEPEDDEMQXXXXXXXXXXXXXXXXXELDLGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGS---RSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSS---GSDSS-RVVDRLRRTRAARAS 1232
A AAA L KAEPVE D E EL TD++DKRRRNREHAKRSRMRKRVRLGGLEGM+LSLRRENVRLR IIKQ IP+RAD IIR CA+DNTNAD+VAKQDVVQGMRP SI +SSRW SRG G S RSR+KLEGG GGR K+ CVPSALKLMSPSYQ+VKALSESQANFILTNPNLPDCPIIFASQGF DLTGY+ S+VIGKNCRFLQGPGTD +TVSILRNNLA+GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPP++FHKLLHRVPLPESLL D+SS+SGED AD +KP Y AR+GRSS GS+S+ RVVDRLRRTRAA A+
Sbjct: 222 AAAAAAAELVKAEPVEGSIDHEAPDSEEEDEDHRNINENGDELGSCTDVSDKRRRNREHAKRSRMRKRVRLGGLEGMVLSLRRENVRLRQIIKQGIPDRADEIIRMCAKDNTNADMVAKQDVVQGMRPTTSI-TSSRWKSRGFGGSSSSISRSRLKLEGGGE----GGRSKERCVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGEDTAD-IKPNMYSARLGRSSSLGGSESAPRVVDRLRRTRAAAAT 589
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X144_SACJA (Putative LOV domain-containing protein n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A126X144_SACJA) HSP 1 Score: 429 bits (1102), Expect = 1.060e-137 Identity = 245/350 (70.00%), Postives = 267/350 (76.29%), Query Frame = 3
Query: 255 ELDLGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSR--GNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSSGS----------------------DSSRVVDRLRRTRAARA 1229
ELD G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR I+K+ IPERAD I+R CA DNTN D VAKQDVVQGMRP +S+ +SSS WSSR RSR KLEGG R GG KD VPSALKLMSP YQSVKAL+ESQANF+LTNPNLPDCPIIFASQGF +LTGY+ +VIGKNCRFLQGPGTD TVSI+RNNLA GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPPAVFH+LLHRVPLPESLL D+SS+S ED +D M VG + S RVVDRLRRTRAA A
Sbjct: 137 ELDTGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRRIVKKGIPERADSILRLCASDNTNPDTVAKQDVVQGMRPGMSVGSSSSNWSSRLGXXXXXXXRSRPKLEGGTRRH--GGGSKDRRVPSALKLMSPCYQSVKALAESQANFVLTNPNLPDCPIIFASQGFLELTGYEGRQVIGKNCRFLQGPGTDPGTVSIIRNNLAGGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPAVFHRLLHRVPLPESLLNDESSDS-EDSSDTM------VNVGTTXXXXXXXXXXXXXXXXXXXXXXXXVSSPRVVDRLRRTRAAAA 477
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WZI8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZI8_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 1.280e-131 Identity = 230/326 (70.55%), Postives = 264/326 (80.98%), Query Frame = 3
Query: 270 TDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSSGSDSS------RVVDRLRRTRAARA 1229
+DL++KRRRNREHAKRSRMRKR+RLGGLE M+L LRRENVRLR ++K+ IP+RA+ IIRTCA DN +ADLVAKQDVVQGMRP++++ +S W SR + GGSR+R K++ +RH K VPSALKLMSPSYQSVKALSESQANFILTNPNLP CPIIFAS GF DLTGY+ S+VIGKNCRFLQGPGTD +TVSI+R NLA GRDTS+CILNYKADGTPFWNQLSIG LLD+QGQVAN+VGVLCEVKQMP A FH+LLHRVPLPESLL D SS+SG++ AD + GRS + RVVDRLRRTRAA A
Sbjct: 249 SDLSEKRRRNREHAKRSRMRKRMRLGGLEEMVLELRRENVRLRQMVKKGIPDRAEDIIRTCASDNADADLVAKQDVVQGMRPSMAVTGASGWGSRFS--GGSRTRPKVD--SRHSG----NKYRSVPSALKLMSPSYQSVKALSESQANFILTNPNLPGCPIIFASPGFVDLTGYEASQVIGKNCRFLQGPGTDPVTVSIIRKNLAEGRDTSVCILNYKADGTPFWNQLSIGNLLDSQGQVANNVGVLCEVKQMPAADFHRLLHRVPLPESLLNDTSSDSGDEAADSKSFGRSRNAGGRSMADGVAGAPAYPRVVDRLRRTRAASA 566
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WV95_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV95_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 2.320e-129 Identity = 228/326 (69.94%), Postives = 265/326 (81.29%), Query Frame = 3
Query: 267 GTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINS-SSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGAR----VGR--SSGSDSSRVVDRLRRTRAA 1223
G++L++KRRRNREHAKRSRMRKRVRLGGLE +L LRRENVRLR I+KQ IP+RAD IIRTCA DNT+ADLV KQDVVQGMRP ++ NS ++ W +R +E R+ ++EGG R S+ +D VPSALKLMSPSYQSV AL+ESQANFILTNPNLPDCPIIFAS GF DLTGY S+VIGKNCRFLQG GTD +TVSI+RNNL +GRDTS+CILNYKADGTPFWNQLSIGVLLD+ G+VANHVGVLCEVKQMPPA FH+LLHRVPLPESLL DDS +SG+D++D + R V R S+ + + VDRLRRTRA+
Sbjct: 235 GSELSEKRRRNREHAKRSRMRKRVRLGGLEEAVLELRRENVRLRQIVKQGIPDRADDIIRTCASDNTDADLVDKQDVVQGMRPGMTTNSLAAGWGTRTSER--VRNNARVEGGGRKPSS----RDLRVPSALKLMSPSYQSVTALAESQANFILTNPNLPDCPIIFASPGFMDLTGYDASDVIGKNCRFLQGAGTDPVTVSIIRNNLTDGRDTSVCILNYKADGTPFWNQLSIGVLLDSHGRVANHVGVLCEVKQMPPADFHRLLHRVPLPESLLVDDS-DSGDDLSDGCGRAQSNVRSTSLVDRQESNSPAAPKTVDRLRRTRAS 553
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X3Q0_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X3Q0_PETFA) HSP 1 Score: 407 bits (1045), Expect = 4.290e-126 Identity = 231/358 (64.53%), Postives = 268/358 (74.86%), Query Frame = 3
Query: 264 LGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGA--RHRSAGGRG-----KDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSES--GEDIADDMKPPKYGARVGRSSGSDSS-------------------------RVVDRLRRTRAARAS 1232
+G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR ++ + IP+RA IIR CA+DNTNADLVAKQDVVQGMRP +S+ +SSS WS+RG G+RSR KLEGG+ R R +GGRG KD VPSALKLMSP YQ+VKAL++SQANFILTNPNLPDCPIIFASQGF +LTGY+ +VIG+NCR LQGPGTD +T+SI+R+N+ GRD S+CILNYK DG PFWNQLSIGVLLDA GQVANHV V+ EV MPPAVFH+LLHRVPLPESLL DDS GE + D + P + V S + SS RVVDRLRRTRAA A+
Sbjct: 358 VGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGSIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG----GTRSRPKLEGGSSSRKRGSGGRGGGTGSKDRRVPSALKLMSPCYQTVKALADSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRLLQGPGTDPITLSIVRDNVEAGRDASVCILNYKKDGAPFWNQLSIGVLLDAHGQVANHVAVMYEVNPMPPAVFHRLLHRVPLPESLLNDDSGSDSDGEINSKDRRDPVERSEVAAGSFNHSSVGGXXXXXXXXXXXXXXXXXXXXXPRVVDRLRRTRAAAAA 711
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WZ47_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WZ47_SARFS) HSP 1 Score: 385 bits (989), Expect = 1.220e-123 Identity = 208/265 (78.49%), Postives = 226/265 (85.28%), Query Frame = 3
Query: 450 CARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGS---RSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRS----SGSDSSRVVDRLRRTRAA 1223
CARDNTNAD+VAKQDVVQGMRP SI +SSRW SRG G S RSR+KL+GG GGR K+H VPSALKLMSPSYQ+VKALSESQANFILTNPNLPDCPIIFASQGF DLTGY+ S+VIGKNCRFLQGPGTD +TVSILRNNLA+GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPP++FHKLLHRVPLPESLL D+SS+SGED AD KP Y AR+GRS S +SRVVDRLRRTR +
Sbjct: 2 CARDNTNADMVAKQDVVQGMRPTTSI-TSSRWKSRGFGGSSSSIPRSRLKLDGGGE----GGRSKEHRVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGEDTAD-TKPNIYSARMGRSGSLGSSESASRVVDRLRRTRCS 260
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X2D8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D8_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 1.400e-121 Identity = 229/366 (62.57%), Postives = 268/366 (73.22%), Query Frame = 3
Query: 264 LGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGR---------------GKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDS-SES-GEDIADDMKPPKYGARVGRSSGSDSS-------------------------RVVDRLRRTRAARAS 1232
+G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR ++ + IP+RA IIR CA+DNTNADLVAKQDVVQGMRP +S+ +SSS WS+RG G+RSR KLEGG+ S+ R KD VPSALKLMSPSYQ+VKAL++SQANF LTNPNLPDCPIIFASQGF +LTGY+ +VIG+NCRFL+GPGTD +T+SI+RNN+ GRD S+CILNYK DGTPFWNQLSIGVLLDA GQVANHV V EV MPPAVFH+LLHRVPLPESLL D+S SES G+ ++ + P + V S + SS RVVDRLRRTRAA A+
Sbjct: 355 VGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGAIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG----GTRSRPKLEGGS---SSSRRXXXXXXXXXXXXXXGSKDRRVPSALKLMSPSYQTVKALADSQANFFLTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRFLEGPGTDPVTLSIVRNNVEAGRDASVCILNYKKDGTPFWNQLSIGVLLDAHGQVANHVAVTYEVNPMPPAVFHRLLHRVPLPESLLNDESGSESDGDSNSNHRRDPVERSEVAAGSFNHSSAXXXXXXXXXXXXXXXXSGAGVAVPRVVDRLRRTRAAAAA 713
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A6H5K3S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S9_9PHAE) HSP 1 Score: 394 bits (1011), Expect = 3.550e-121 Identity = 224/351 (63.82%), Postives = 258/351 (73.50%), Query Frame = 3
Query: 267 GTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYG------------------ARVGRSSGS-----------DSSRVVDRLRRTRAARA 1229
GT+L DKRRRNREHAKRSR+RKRVRLGGLE +LL LRRENVRLR +I + IP+RA IIR C +DNTNAD+VAKQDV+QGMRP +S+ +SSS W++RG G+R+R K GG GK VPSALKLMSP YQ+VKAL++SQANF+LTNPNLPDCPIIFASQGF DLTGY ++VIGKNCRFLQGPGTD +T+SI+RNN+A G DTS+CILNYK D T FWNQLSIGVLLD+ GQVANHVGV+CEV QMPPAVFH+LLHRVPLPESLL DDS +S D D+ + AR SG SSR+VDRL RTRAA A
Sbjct: 362 GTELTDKRRRNREHAKRSRLRKRVRLGGLEELLLGLRRENVRLRKVIMRGIPDRAGAIIRNCTKDNTNADVVAKQDVIQGMRPGMSVGSSSSSWTARG----GTRTRPKPAGGXXX-----SGKGRYVPSALKLMSPCYQTVKALADSQANFVLTNPNLPDCPIIFASQGFLDLTGYDGNDVIGKNCRFLQGPGTDPVTLSIIRNNVAAGLDTSVCILNYKKDKTQFWNQLSIGVLLDSHGQVANHVGVMCEVNQMPPAVFHRLLHRVPLPESLLHDDS-DSDSDGHDNHRVSXXXXXXXXXXXXXXXXXXXXRARASSVSGDVPDKGAAXXXXASSRIVDRLHRTRAAAA 702
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WUW4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUW4_9PHAE) HSP 1 Score: 348 bits (893), Expect = 5.520e-109 Identity = 199/328 (60.67%), Postives = 230/328 (70.12%), Query Frame = 3
Query: 360 MLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAK---QDVVQGMRPALSINSSSR-WSSRGNEGGGSRSRVKLEGGARHR--SAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSS-------------------------------GSDSSRVVDRLRRTRAARAS 1232
M+L LRRENVRLR ++ IP+RA IIRTCA+ N QDVVQGMRP +S+ SSS WS+RG G+R R+K EGG+ S+GGR KDH VPSALKLMSPSYQ+VKAL +SQANFILTNPNLPDCPIIFASQGF +LTGY+ +VIGKNCRFLQGPGTDK+T+SI+RNNLA GRD S+CILNYK +GTPFWNQLS+GVLLDA GQVANHVGV+CEV QMPP VFH+LLHRVPLPESLL DDS + + D ++ + A R S S RVVDRLRRTRAA A+
Sbjct: 1 MVLGLRRENVRLRQLVMSGIPDRAAAIIRTCAKGNXXXXXXXXXXXQDVVQGMRPGMSVGSSSASWSARG----GTRKRIKAEGGSGGGGVSSGGR-KDHRVPSALKLMSPSYQTVKALVDSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGKNCRFLQGPGTDKMTLSIVRNNLAAGRDVSVCILNYKKNGTPFWNQLSVGVLLDAHGQVANHVGVMCEVSQMPPPVFHRLLHRVPLPESLLHDDSGSESDGVDDHVERSRVSAGSFRHSDGTKGGGNSXXXXXXXXXXXXXXXXXXSAARSSTGPRVVDRLRRTRAAAAA 323
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WUS5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS5_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.340e-101 Identity = 197/351 (56.13%), Postives = 244/351 (69.52%), Query Frame = 3
Query: 273 DLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSS--------------SRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDM------KPPKY-----GARVGRSS-----GSDSSRVVDRLRRTRAARAST 1235
+L+DKRRRNREHAK+SR+RKR LGGLE LL LRREN+ LR + K++IP+RA+ IIR CA +T+ D+V K+D+VQGMRP+ SI+ R S N GG S +L G R GR ++ VPSA KLMSPS+ V AL+ESQANF+LTNPN+P PI+FASQGF LTGY +V+G+NCRFLQG GTD + VSILRNN+A+GRDTS+CILNYKA GTPFWNQLS+G LLDA+G++ANHVGV+ E+KQMP A FH+LLHRVPLPE LL+D+SSE E +D M P K GA+ G+ G + VVD LRRTRA A++
Sbjct: 181 ELSDKRRRNREHAKQSRLRKRALLGGLEETLLELRRENMCLRQLAKKTIPDRAENIIRECAYVSTDPDVVVKRDIVQGMRPSSSISFRISQATSHASHEKLHGRVSPSENRGGTSNGSTELRG----RGRAGRDRER-VPSATKLMSPSHHVVSALAESQANFVLTNPNIPGSPIVFASQGFQALTGYAAEQVVGRNCRFLQGVGTDPMVVSILRNNIAHGRDTSVCILNYKACGTPFWNQLSVGTLLDAEGRIANHVGVMYEIKQMPQADFHRLLHRVPLPEKLLQDESSEDDERESDLMDNEGATNPSKSQRGNTGAKGGQGQSVGGGGKARTHVVDSLRRTRAGSAAS 526 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11608.1267.1 >prot_H-elongata_contig11608.1267.1 ID=prot_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp MSRPAAVTPAAALLAKAEPVEEPEDDEMQEPEEDEDEDFVKKEDDDELDLback to top mRNA from alignment at H-elongata_contig11608:757..4457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11608.1267.1 ID=mRNA_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3701bp|location=Sequence derived from alignment at H-elongata_contig11608:757..4457+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11608:757..4457+ >mRNA_H-elongata_contig11608.1267.1 ID=mRNA_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2256bp|location=Sequence derived from alignment at H-elongata_contig11608:757..4457+ (Himanthalia elongata Himel1 dioecious)back to top |