prot_H-elongata_contig52545.12562.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52545.12562.1
Unique Nameprot_H-elongata_contig52545.12562.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: D7G6V6_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V6_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.470e-25
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFVQ 62
            MNCVGAV AARR G G +IVTVLCDSG+RGISRFWNR+F+EAR LKWP P   TL NLDF++
Sbjct:  357 MNCVGAVAAARRAGTGKRIVTVLCDSGSRGISRFWNREFIEARGLKWPLPNDETLENLDFIE 418          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A7S2UYT2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYT2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.840e-17
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFV 61
            +NCVGAVLAA+ LGPGH IVT+LCDSG R  SR W++KF++   L+WP P    + +LDF+
Sbjct:   59 INCVGAVLAAKHLGPGHTIVTILCDSGQRHRSRLWSQKFIKDFGLQWPEPA--QVASLDFL 117          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A835Z4W8_9STRA (Putative cysteine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.100e-17
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFV 61
            MN  GAV AAR+LG GH IVTVLCD G R  SRFWNR FVE R L+WP P+   L +LDFV
Sbjct:  325 MNAAGAVKAARQLGSGHTIVTVLCDHGARYASRFWNRAFVEGRGLQWPEPD--QLLSLDFV 383          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A6V1K2C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K2C6_HETAK)

HSP 1 Score: 82.4 bits (202), Expect = 6.700e-17
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFV 61
            +NCVGAVLAA+ LGPGH +VTVLCDSG R + RFW+R  +  R L+WP  +   LH++DF+
Sbjct:  355 LNCVGAVLAAQSLGPGHTVVTVLCDSGQRHLGRFWDRATLARRGLRWPGEK--DLHSIDFL 413          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A4D9DD93_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD93_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.010e-14
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFVQ-NGR 65
            MN VG V AAR LGPGH +VTVLCDSG R ++RFWNR+ VE   L WP        NL+F+Q NG+
Sbjct:  347 MNLVGCVRAARVLGPGHTVVTVLCDSGQRHLTRFWNRRVVEGAGLIWPET---PPVNLNFLQRNGQ 409          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A5B8MMS2_9CHLO (Cysteine synthase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MMS2_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 8.400e-13
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFV 61
            MNCVGA+  AR+LGPGH IVTVLCD G R +S+F NR ++E   L   SP+G    +LDFV
Sbjct:  332 MNCVGALKVARKLGPGHTIVTVLCDGGQRHLSKFHNRAYLEKMNL---SPKG--CESLDFV 387          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A1Y1Y8I3_9FUNG (OAS-TL 2 protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y8I3_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 2.220e-12
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFVQ 62
            +NCV AV  AR+LGPGH IVT+LCDSG R +++FWN +++    L   +P+     NL F+Q
Sbjct:  343 INCVAAVRMARQLGPGHTIVTILCDSGQRHLTKFWNDEYIANANLSTEAPD-----NLSFIQ 399          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A1Z5KKY4_FISSO (Cysteine synthase A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKY4_FISSO)

HSP 1 Score: 68.9 bits (167), Expect = 4.370e-12
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTL 55
            MN VGA+  A +L PG ++VTV+CDSG+R ++RFWNR F+  R L+WP  + + L
Sbjct:  392 MNVVGAIETAWKLSPGSRVVTVICDSGSRHLTRFWNRDFILERGLRWPRDQEKEL 446          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A3M6VR50_9STRA (PALP domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR50_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.150e-11
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFV 61
            +NCV AV AAR+LGPGH IVT+LCDSG R +S+FWN   +   R  W   E R  H L+F+
Sbjct:  207 LNCVAAVRAARKLGPGHTIVTILCDSGQRHLSKFWNEAHI---RQNWQL-EPRATH-LEFL 262          
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Match: A0A015LFH0_RHIIW (Putative cysteine synthase n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015LFH0_RHIIW)

HSP 1 Score: 67.0 bits (162), Expect = 1.540e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSPEGRTLHNLDFVQ 62
            +NCVG V  AR+LGPGH+IVT+LCDSG R +++FWN ++++   +     EG     L+F++
Sbjct:  254 INCVGCVRVARKLGPGHRIVTILCDSGQRHLTKFWNDEYLKQNNIYPKEEEG-----LNFIK 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52545.12562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6V6_ECTSI2.470e-2574.19Cysteine synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S2UYT2_9STRA1.840e-1757.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z4W8_9STRA4.100e-1765.57Putative cysteine synthase n=1 Tax=Tribonema minus... [more]
A0A6V1K2C6_HETAK6.700e-1757.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DD93_9STRA2.010e-1457.58PALP domain-containing protein n=2 Tax=Monodopsida... [more]
A0A5B8MMS2_9CHLO8.400e-1357.38Cysteine synthase n=2 Tax=Chloropicon primus TaxID... [more]
A0A1Y1Y8I3_9FUNG2.220e-1248.39OAS-TL 2 protein n=1 Tax=Basidiobolus meristosporu... [more]
A0A1Z5KKY4_FISSO4.370e-1250.91Cysteine synthase A n=2 Tax=Fistulifera solaris Ta... [more]
A0A3M6VR50_9STRA1.150e-1154.10PALP domain-containing protein n=2 Tax=Peronospora... [more]
A0A015LFH0_RHIIW1.540e-1145.16Putative cysteine synthase n=1 Tax=Rhizophagus irr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 1..49
e-value: 1.0E-9
score: 40.2
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE AND TRP SYNTHASE FAMILY MEMBERcoord: 1..44
NoneNo IPR availablePANTHERPTHR10314:SF35CYSTEINE SYNTHASE-RELATEDcoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52545contigH-elongata_contig52545:2116..2502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52545.12562.1mRNA_H-elongata_contig52545.12562.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52545 2090..2502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52545.12562.1 ID=prot_H-elongata_contig52545.12562.1|Name=mRNA_H-elongata_contig52545.12562.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MNCVGAVLAARRLGPGHQIVTVLCDSGNRGISRFWNRKFVEARRLKWPSP
EGRTLHNLDFVQNGR*
back to top