mRNA_H-elongata_contig52545.12561.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: D7G6V6_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V6_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 5.010e-153 Identity = 218/246 (88.62%), Postives = 233/246 (94.72%), Query Frame = 1
Query: 1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
VEYLNPGG+SKDRIAASMI+EAEA+G+L +GGTVVEGTSGSTGICLASLCRAKGYRC+IVMPDDQA EKV+LL TFGAEVIQVRTASIANPDHYINVAAR+A ERPG VFMDQFET ANLKAHLA+TGPEIWEQT GRLDAFVMGAGTGG LAGVS+FLR KGC AKVYLVDPPGSALFNRVR+G CYS QMSER+VRKHRYDTIAEGIGNDH+TGNF KAILDDAFRVSDQEAVYMAHYLL++EG
Sbjct: 103 VEYLNPGGTSKDRIAASMIKEAEATGELKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLAHTGPEIWEQTNGRLDAFVMGAGTGGCLAGVSLFLRGKGCPAKVYLVDPPGSALFNRVRHGVCYSPQMSERDVRKHRYDTIAEGIGNDHVTGNFGKAILDDAFRVSDQEAVYMAHYLLKHEG 348
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A835Z4W8_9STRA (Putative cysteine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W8_9STRA) HSP 1 Score: 356 bits (914), Expect = 3.600e-120 Identity = 171/246 (69.51%), Postives = 205/246 (83.33%), Query Frame = 1
Query: 1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
VE+LNPGG+ KDR+AA+MIE AEA+G L GGTVVEGTSGSTGI LAS+CRA+G+RC+IVMPDDQA EK +L T GA V+QV+TA+IA+P+HY+N A R+A+E GAVFMDQFET AN H A T PEIW QTGG LDAFVMGAGTGGS+AGVS +L+ + +VYLVDPPGS+LFNRV++G CY+ Q +ER VR+HRYDT+AEGIG D +T NFAKA +DDAF +SDQEAV MAHYLLR+EG
Sbjct: 71 VEFLNPGGTGKDRLAAAMIEAAEAAGLLKPGGTVVEGTSGSTGISLASICRARGFRCVIVMPDDQAGEKKAMLETLGATVVQVKTAAIASPEHYVNAARRIAAETLGAVFMDQFETSANFNVHYARTAPEIWSQTGGALDAFVMGAGTGGSIAGVSAYLKERRRGIRVYLVDPPGSSLFNRVKFGVCYAAQQAERAVRRHRYDTLAEGIGLDRVTANFAKATIDDAFAISDQEAVTMAHYLLRHEG 316
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A7S2RC68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC68_9STRA) HSP 1 Score: 321 bits (822), Expect = 2.640e-106 Identity = 161/253 (63.64%), Postives = 194/253 (76.68%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERP--------GAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
EYLNPGG+ KDRIA +MIEEAE G+L GGTVVEGTSGSTGI LA+LC +GYRC+IVMPDDQ+ EK +LL FGAEV+ VRTASI+NP HY+NVA ++A G F DQFET+AN AH+A TGPE+W+QT G+ AFVM AGTGG++AGVS FL+ K KV L DPPGS+LF+ V++G C++ Q SER VR+HRYDTIAEGIG D LT N +A +DDA VSDQEA+YMAHYLL++EG
Sbjct: 52 EYLNPGGTGKDRIALAMIEEAERRGQLAPGGTVVEGTSGSTGIALAALCACRGYRCVIVMPDDQSPEKQRLLRQFGAEVLVVRTASISNPQHYVNVARKLAKGEEVAGHHLPGGGYFTDQFETLANYHAHVATTGPELWQQTQGQCHAFVMSAGTGGTIAGVSRFLKSKNPGIKVVLADPPGSSLFHFVKHGVCWAPQQSERTVRRHRYDTIAEGIGLDRLTRNIQEAEIDDAIAVSDQEALYMAHYLLKHEG 304
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A6V1K2C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K2C6_HETAK) HSP 1 Score: 320 bits (821), Expect = 1.550e-105 Identity = 157/245 (64.08%), Postives = 190/245 (77.55%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGG+ KDRIA MIEE E G L EGGTVVEGTSGSTGI LA +CRA+GYRC+IVMPDD + KV LL FGAEV V+ ASIANP H+ VA +A + GAVFMDQF T N +AH TGPEIW QT G+++AFVMGAGTGG++AGVS FL++K + KV+LVDPPGS+LF+RV++G CY+ + SE+ VRKHRYD+I EG+G D LT NF KA +DDA+++ DQ V MAHYLLR EG
Sbjct: 102 EHLNPGGTGKDRIALQMIEECEKRGLLREGGTVVEGTSGSTGISLALVCRARGYRCVIVMPDDTSQTKVDLLRMFGAEVKVVKAASIANPKHFCKVAEELAKKIDGAVFMDQFNTGFNYRAHYLGTGPEIWRQTRGQVNAFVMGAGTGGTIAGVSKFLKKKNPKVKVFLVDPPGSSLFHRVKHGVCYTPEQSEQRVRKHRYDSIVEGVGLDRLTQNFLKAAIDDAYKIPDQTTVQMAHYLLRKEG 346
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A067D0S0_SAPPC (PALP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0S0_SAPPC) HSP 1 Score: 311 bits (798), Expect = 1.470e-102 Identity = 151/245 (61.63%), Postives = 187/245 (76.33%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGGSSKDR+A ++E+AEA G L+ GGT+VEGTSGSTGI LA + RAKGY+C+IVMPDDQA EK LL FGA V V+ ASI N HY+N A R ASE PG F DQFE +AN H TG EIWEQT G +DA+VM AGTGG++AGVS++L+ K ++ L DPPGS+L+N+VR+ CY+ Q SER V++HRYDTIAEGIG D LT NF +A +DDA+RV+DQEA+ M+ YLL+ EG
Sbjct: 70 EFLNPGGSSKDRVAKGIVEDAEARGLLSPGGTIVEGTSGSTGISLALIARAKGYKCLIVMPDDQAKEKSDLLTQFGATVEFVKPASIVNAKHYVNQARRRASEIPGGYFADQFENLANCDVHYHTTGREIWEQTNGHVDAYVMSAGTGGTIAGVSLYLKEKNPNVQIILADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTRAAIDDAYRVTDQEAIDMSRYLLQEEG 314
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A4D9DD93_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD93_9STRA) HSP 1 Score: 311 bits (796), Expect = 8.530e-102 Identity = 162/252 (64.29%), Postives = 194/252 (76.98%), Query Frame = 1
Query: 1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPG--AVFMDQFETMANLKAHLANTGPEIWEQT----GGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
VEYLNPGG+SKDR+A MI+EAE +G L G TV+EGTSGSTGI LASLCRA+GYRC+IVMPDDQAAEK LL FGAEV V+ ASIANP+HY N AR +E G AV+MDQFETMAN +AH TGPE+WEQ G R DAFVM AGTGG+LAGVS + + + +V+LVDPPGS+L+++V++G CYS ER VR+HRYD++AEGIG D LT NF KA +D+AF V DQEAV MAH+LL+ EG
Sbjct: 88 VEYLNPGGTSKDRVALRMIQEAEKAGLLHPGSTVIEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKAHLLKQFGAEVEIVKPASIANPNHYCN-RARARAEELGDEAVYMDQFETMANFRAHYEGTGPEMWEQVMAGYGARPDAFVMSAGTGGTLAGVSRAWKEREEKVQVFLVDPPGSSLYHKVKHGVCYSTAQRERGVRRHRYDSLAEGIGLDRLTANFRKARIDEAFHVPDQEAVDMAHFLLQAEG 338
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A485LMB3_9STRA (Aste57867_23202 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMB3_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.610e-101 Identity = 155/245 (63.27%), Postives = 185/245 (75.51%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGGSSKDR+A +IE+AEA G LT GGT+VEGTSGSTGI LA L RAKGY+CIIVMPDDQA EK LL FGA V V+ ASI N HY+N A R ASE PG F DQFE +AN + H TG EIWEQT GR+DAFVM AGTGG++AGVS +L+ + +V L DPPGS+L+N+VR+ CY+ Q SER V++HRYDT+AEGIG D LT NF A +DDA+ V+D EAV MA +LLR +G
Sbjct: 73 EFLNPGGSSKDRVAKGIIEDAEARGLLTPGGTIVEGTSGSTGISLALLARAKGYKCIIVMPDDQAKEKSMLLEQFGATVEFVKPASIVNAKHYVNQARRRASEIPGGYFADQFENLANTEIHYRTTGREIWEQTNGRVDAFVMSAGTGGTIAGVSRYLKEQNPSIQVVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTVAEGIGIDRLTANFLHAEIDDAYLVTDNEAVEMARHLLREDG 317
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A1W0A6Y0_9STRA (Cysteine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6Y0_9STRA) HSP 1 Score: 307 bits (786), Expect = 9.940e-101 Identity = 152/245 (62.04%), Postives = 183/245 (74.69%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGGSSKDR+A ++E+AE G L GGT+VEGTSGSTGI LA + RAKGY C+IVMPDDQA EK LL FGA V V+ ASI N +HY+N A + A+E G F DQFE AN H TG EIWEQT G++DAFVM AGTGG++AGVS++L+ K +V L DPPGS+L+N+VRY CY+ Q SER V++HRYDTIAEGIG D LT NF KA +DDA+ V+DQEAV M+ YLL NEG
Sbjct: 70 EFLNPGGSSKDRVAKGIVEDAEERGLLKPGGTIVEGTSGSTGISLALIARAKGYNCLIVMPDDQAKEKSDLLQQFGAVVEFVKPASIVNANHYVNQARQRANEIQGGYFADQFENEANCNVHYKTTGREIWEQTNGKIDAFVMSAGTGGTIAGVSLYLKHKNPNVQVVLADPPGSSLYNKVRYNVCYAAQQSERTVKRHRYDTIAEGIGIDRLTANFLKAKIDDAYAVTDQEAVDMSRYLLHNEG 314
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A1V9ZT20_9STRA (Cysteine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZT20_9STRA) HSP 1 Score: 306 bits (783), Expect = 3.110e-100 Identity = 152/245 (62.04%), Postives = 186/245 (75.92%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGGSSKDR+A ++E+AEA G L GGT+VEGTSGSTGI LA + RAKGY+CIIVMPDDQA EK LL FGA V V+ ASI N HY+N A R A+E PG F DQFE +AN H TG EIWEQT G++DAFVM AGTGG++AGVS++L+++ +V L DPPGS+L+N+VR+ CY+ Q SER V++HRYDTIAEGIG D LT NF +A +DDA+ VSDQEAV M+ +LL EG
Sbjct: 74 EFLNPGGSSKDRVAKGIVEDAEARGLLAPGGTIVEGTSGSTGISLALIARAKGYKCIIVMPDDQAKEKSDLLEQFGATVEFVKPASIVNAKHYVNQARRRANEIPGGFFADQFENLANCDVHYRTTGREIWEQTNGKVDAFVMSAGTGGTIAGVSLYLKQQKPDIQVVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTQAKIDDAYVVSDQEAVDMSRFLLHEEG 318
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: W2RD14_PHYPN (PALP domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2RD14_PHYPN) HSP 1 Score: 304 bits (779), Expect = 2.640e-99 Identity = 147/245 (60.00%), Postives = 183/245 (74.69%), Query Frame = 1
Query: 4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
E+LNPGGSSKDR+A ++E+AE G L EGGT++EGTSGSTGI L+ + RA+GYRCIIVMPDDQA EK +LL FGAEV+ V+ ASI N HY+N A R+A G F DQFE AN +H TGPEIW QT G +DAFVM AGTGG++AG S +L+ K +V+L DPPGS+L+N+VR CY+ Q +E +VR+HRYDTIAEG+G D LT NF A +DDAF+V+DQE V M+ +LLR EG
Sbjct: 99 EFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAKRLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDGTVDAFVMAAGTGGTIAGTSAYLKEKNPDVQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEG 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52545.12561.1 >prot_H-elongata_contig52545.12561.1 ID=prot_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=246bp VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCback to top mRNA from alignment at H-elongata_contig52545:269..1779+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52545.12561.1 ID=mRNA_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1511bp|location=Sequence derived from alignment at H-elongata_contig52545:269..1779+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52545:269..1779+ >mRNA_H-elongata_contig52545.12561.1 ID=mRNA_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1476bp|location=Sequence derived from alignment at H-elongata_contig52545:269..1779+ (Himanthalia elongata Himel1 dioecious)back to top |