mRNA_H-elongata_contig52198.12516.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52198.12516.1
Unique NamemRNA_H-elongata_contig52198.12516.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE)

HSP 1 Score: 625 bits (1613), Expect = 3.150e-220
Identity = 290/405 (71.60%), Postives = 336/405 (82.96%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPVG-GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            M   + ++ PQ+AL++GRYLWA RK RSD  D RVM LARR+WHSDD+SRASGDSG KAMWRPSKKAGE YHPRR+LMV GD+V   FL W  YL LKAELL ED SFTDPGR+ FLSTRCGCL EP+ S CAC+IHTQQ LYL+ + MLM +MH NCDCTC+ C+GG GC KW+ MC+ LH+FS+   CEKVD L ED+  +FEHWGR+P CVA +CS CGFGNP GIP +C ALG  A R+VGW+RF+DQ MEDGK HKKQQ+PQ G L DLW EF+EHSKKYI HHELAKWQR+AHNMCL TF KGELL+ETDFIEKY+HEA  VLTC+TAP+TT+MV+LVHHSP   G+H TDAWVFVSSDPNHDFDFHIYA+DIIL++YI+G+GRAATAGT VPTVH+FT
Sbjct:    1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLK-VEMLMPAMHSNCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFT 404          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE)

HSP 1 Score: 635 bits (1639), Expect = 5.590e-220
Identity = 291/405 (71.85%), Postives = 336/405 (82.96%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPV-GGKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            M   + ++ PQ+AL++GRYLWA RK RSD  D RVM LARR+WHSDD+SRASGDSG KAMWRPSKKAGE YHPRR+LMV GD+V   FL W  YL LKAELL ED+SFTDPGR+ FLSTRCGCL EP+ SQCAC+IHTQQ LYL+A  MLM ++H NCDCTC+WC+GG GC KW+ MC+ LH+FS+   CEKVD L ED+   FEHWGR+P CVA +CS CGFGNP GIP +C ALG  A R+VGW+RF DQ MEDGK HKKQQLPQ G L DLW EF+EHSKKY+ HHELAKWQR+AHNMCL TF KGELL+ETDFIEKY+HEA  +LTC+TAP+TT+MV+LVHHSP   G+H TDAWVFVSSDPNHDFDFHIYA+DIILQ+YI+G+GRAATAGT  PTVH+FT
Sbjct:  266 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFT 670          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 635 bits (1639), Expect = 1.030e-212
Identity = 291/405 (71.85%), Postives = 336/405 (82.96%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPV-GGKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            M   + ++ PQ+AL++GRYLWA RK RSD  D RVM LARR+WHSDD+SRASGDSG KAMWRPSKKAGE YHPRR+LMV GD+V   FL W  YL LKAELL ED+SFTDPGR+ FLSTRCGCL EP+ SQCAC+IHTQQ LYL+A  MLM ++H NCDCTC+WC+GG GC KW+ MC+ LH+FS+   CEKVD L ED+   FEHWGR+P CVA +CS CGFGNP GIP +C ALG  A R+VGW+RF DQ MEDGK HKKQQLPQ G L DLW EF+EHSKKY+ HHELAKWQR+AHNMCL TF KGELL+ETDFIEKY+HEA  +LTC+TAP+TT+MV+LVHHSP   G+H TDAWVFVSSDPNHDFDFHIYA+DIILQ+YI+G+GRAATAGT  PTVH+FT
Sbjct:  890 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFT 1294          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 542 bits (1396), Expect = 1.090e-182
Identity = 258/405 (63.70%), Postives = 309/405 (76.30%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPVG-GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            M N N  ++P+ A  EG Y++ +RKTRSDVT+  VM LAR +WHSDDVSRA+G+SG K M++ SKK     HPRR+LM  GD V  MFL  R YLALK+ LL +D +FTDPGR+TFLSTRCGCL +P ASQCAC+IHTQQ+LYLEAL  LMGS+H +CDC C WC+   GCK+W  MC+ L  FSD   CEKV++L  D +  FE WGR+P C A KCS CGFG P GIPT+C A+ +   R+V WIRF+DQ M DGK HKKQQLPQ G L DLWDEFM HS  Y+EHH LAKWQR+AH MC+ T R+GELLIETDFIEKYRHEAR VLTC+TAPTTT+MV+LVHHSP   G+H TDAW+F+SSDPNHDFDFH  A+++++ HY +G   AATAG+  P VHMFT
Sbjct:  255 MHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHS--YMEHHALAKWQRQAHKMCMATLRQGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFT 655          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 6.690e-178
Identity = 245/382 (64.14%), Postives = 285/382 (74.61%), Query Frame = 1
Query:  178 MWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCG-----------------------------------CLA-EPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPVG-GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            MWRPSKKAGE Y PRR+LMV GD+    FL W  YL LKAELL ED+SFTDPGR+ FLSTRCG                                   C+  EP+ SQCAC+IHTQQ LYL+A  MLM +MH NCDCTC+WC+GG GC KW+ MC+ LH+FS+   CEKVD L ED+   FEHWG +P CVA +CS C FGNP+ IP +C ALG  A R+VGW+RF+DQ MEDGK HKKQQ+PQ G L DLW EF+EHSKKYI HHELAKWQR+AHNMCL TF KGELL+ETDFIEKY+HEA  +LTC+TAP+TT+MV+LVHHSP   G+H TD WV VSSDPNHDFDFHIYA+DIIL++YI+G+GRAATAGT VPTVH+FT
Sbjct:    1 MWRPSKKAGEEYQPRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDRSSVMDSSAVSPPQEDGLFADPLSSFLSVSTVRLCVTVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDRGGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLGDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFT 382          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 1.880e-159
Identity = 219/328 (66.77%), Postives = 256/328 (78.05%), Query Frame = 1
Query:  232 MVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPV-GGKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTVHMFT 1212
            MV GD+V   FL W  Y+ LKAELL ED SFTDPGR+ FLSTRCGC  EP+ S+CAC+ HTQQ + L+A  MLM + H NCDCTC+WC+GG GC KW+ MC+ LH+FS+   CEKVD L ED+   FEHWGR+P CVA +CS CGFGNP GIP +C ALG  A R+VGW+RF DQ MEDGK HKKQQLPQ G L DLW EF+EHSKK           R+AHN+CL TF KG LL+ETDFIEKY+HEA  +LTC+TAP+TT+MV+LVHHSP   G+H TDAWVFVSSDPNHDFDFHIYA+DIILQ+YI+G+GRAATAGT  PTVH+FT
Sbjct:    1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSVEPKVSKCACQTHTQQGIDLKAFEMLMPATHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKK-----------RQAHNICLATFSKGALLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFT 317          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 1.000e-154
Identity = 203/306 (66.34%), Postives = 238/306 (77.78%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTF 918
            M   + ++ P+ AL++GRYLWA RK R+D  D RVMDLARR+WHSDD+SRASGDSG +A+WRPSKKAGE YHPRR+LMV GD+V   FL W  YL LKAELL ED SFTDPGR+ FLSTRCGCL EP+ SQCAC+IHTQQ LY +A  MLM ++H NC+CTC WC+G  GC KW+ MC+ LH+FS+   CEK   L E +   FEHWGR+P CVA +C   GFGNP GIP +C ALG  A R+VGW+RF+DQ MEDGK HKKQQLPQ G L DLWDE +EHSKKY+ HHELAKWQR+AHNMCL TF
Sbjct:    1 MHKTDHTIPPKDALEKGRYLWAPRKERTDKMDERVMDLARRFWHSDDISRASGDSGTEAVWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTMFLSTRCGCLVEPKVSQCACQIHTQQGLYHKAFEMLMPAIHANCECTCNWCDGS-GCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQLPQAGKLGDLWDEVVEHSKKYMHHHELAKWQRQAHNMCLATF 305          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 4.710e-119
Identity = 175/286 (61.19%), Postives = 209/286 (73.08%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYI 858
            M N N  ++P+ A  EG Y++ +RKTRSDVT+  VM LAR +WHSDDVSRA+G+SG K M++ SKK     HPRR+LM  GD V  MFL  R YLALK+ LL +D +FTDPGR+TFLSTRCGCL +P ASQCAC+IHTQQ+LYLEAL  LMGS+H +CDC C WC+   GCK+W  MC+ L  FSD   CEKV++L  D +  FE WGR+P C A KCS CGFG P GIPT+C A+ +   R+V WIRF+DQ M DGK HKKQQLPQ G L DLWDEFM HS K I
Sbjct:  255 MHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSVKAI 538          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 4.350e-110
Identity = 186/409 (45.48%), Postives = 245/409 (59.90%), Query Frame = 1
Query:   22 VSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPG--DKVHIMFLVWRPYLALKAELLLED-DSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPV----GGK-HTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTR----VPTVHMFT 1212
            ++P++AL EG Y +  R  RSD T   V++L +R+WH+D VSRASG+S  + MWR SK+ GEV H RR+L V G  +     F  W  Y+  K     E  +   DPGRS FLSTRC CL   +  QCAC+IHTQQ LYL+AL  +  ++     C CRWC   +G   W GM   L  FS+  +C KVD+   D EDE    GR+P C +  C +CGFG   GIPT C AL   + ++V W  ++D +    K  + QQ+ + G L DLW +F +HSK Y+ HH  AKWQ  +H +CL TF  G+++IETDFIEKY H    VLTC+    TT+MV++VH SP     GG+ H T+ W+F S DP HDFDFH +AL  I  +Y+ G G  ATA  R    +P +HMFT
Sbjct:  265 LAPEEALGEGAYWFQPRGKRSDATPPEVLELMKRFWHTDVVSRASGNSSNRDMWRASKREGEVRHARRQLHVQGGGEAAFSKFFEWPDYINFKRIWKSEKGEDIKDPGRSLFLSTRCKCLTTLKTDQCACKIHTQQDLYLKALREV--NVEGRATCDCRWCSAPDGHAAWKGMWEHLGTFSEALLCPKVDLREGDPEDEVGFMGRKPACSSMDCMHCGFGKEGGIPT-CKAL-EMSQQLVKWTHYEDVERPGKKPLQNQQVEKEGKLCDLWADFKKHSKLYVAHHTKAKWQTNSHGLCLSTFEDGDIVIETDFIEKYSHVPGAVLTCARHAQTTLMVAIVHFSPQLWEGGGRVHQTETWIFASEDPAHDFDFHRHALTQIADYYLDGPGGDATAAAREAHRIPRMHMFT 669          
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Match: A0A6H5JIV9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIV9_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 1.240e-102
Identity = 184/425 (43.29%), Postives = 247/425 (58.12%), Query Frame = 1
Query:    1 MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSRASGDSGQKAMWRPSKKAGEVYHPRRELMVPG--DKVHIMFL----------VWRPYLALKAELLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGMLMGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDKEDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQDQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHNMCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPV----GGK-HTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATA----GTRVPTVHMFT 1212
            +K+    + P  AL+ G Y +  R+ RSD T   +++L + +WH+D VSR +G+S    ++R SK      HPRR+LMV G  + V   FL          +WR           + +   DPGR+ FLSTRC CL  P+  QCAC+IHTQQ+ YLEAL  +  ++ D   C CRWC   +G   W G  R L  FSD   C KVD+   D E++ E  GR+PEC +  C+ CGFG   GIP  C  L   + ++V W  + D +     T + Q L + G L DLW +F +HSK Y+ HH  AKWQR  HN CL TF+ G+++IETDFIEKY HE + VLTC+   TTT+MV++VH  P     GG+ H ++ WVF S+DP HDFDFH++AL  I  +Y+ GEG AATA      RVP + MFT
Sbjct:  102 VKSLQPHLPPAAALEAGAYWYRSRRKRSDATPPELVELMKDFWHNDAVSRLTGNSAH--IFRESKSPTARTHPRRQLMVQGGGETVFKKFLESPEFDNFKRIWRSD---------KGEDIKDPGRTRFLSTRCKCLTAPKTDQCACKIHTQQTFYLEALENM--TLVDRPVCDCRWCSAEDGDAIWKGHWRHLGTFSDALACPKVDLRAGDPEEDSEVMGRKPECASSDCNVCGFGKEGGIPF-CKVL-ETSKQLVKWKHYGDLERPGKTTLRDQVLEKEGKLCDLWADFKKHSKVYMAHHSKAKWQRNCHNTCLRTFQDGDIVIETDFIEKYTHEPQKVLTCARHDTTTLMVAIVHFCPQEWEGGGRVHLSETWVFASADPAHDFDFHLHALKQIADYYLDGEGSAATACAREDNRVPRMLMFT 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52198.12516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K491_9PHAE3.150e-22071.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT99_9PHAE5.590e-22071.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE1.030e-21271.85MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5K7E6_9PHAE1.090e-18263.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY26_9PHAE6.690e-17864.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXG9_9PHAE1.880e-15966.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI39_9PHAE1.000e-15466.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF90_9PHAE4.710e-11961.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDQ3_9PHAE4.350e-11045.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JIV9_9PHAE1.240e-10243.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52198contigH-elongata_contig52198:1047..2900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-07_002200.1
Exons4
Model size1214
Cds size1212
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52198.12516.1prot_H-elongata_contig52198.12516.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52198 1047..2900 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930853.474299-CDS-H-elongata_contig52198:1046..12121622930853.474299-CDS-H-elongata_contig52198:1046..1212Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1047..1212 +
1691679598.5093493-CDS-H-elongata_contig52198:1046..12121691679598.5093493-CDS-H-elongata_contig52198:1046..1212Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1047..1212 +
1622930853.490669-CDS-H-elongata_contig52198:1502..17091622930853.490669-CDS-H-elongata_contig52198:1502..1709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1503..1709 +
1691679598.518246-CDS-H-elongata_contig52198:1502..17091691679598.518246-CDS-H-elongata_contig52198:1502..1709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1503..1709 +
1622930853.5094233-CDS-H-elongata_contig52198:1865..23441622930853.5094233-CDS-H-elongata_contig52198:1865..2344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1866..2344 +
1691679598.5281222-CDS-H-elongata_contig52198:1865..23441691679598.5281222-CDS-H-elongata_contig52198:1865..2344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 1866..2344 +
1622930853.524315-CDS-H-elongata_contig52198:2540..29001622930853.524315-CDS-H-elongata_contig52198:2540..2900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 2541..2900 +
1691679598.538407-CDS-H-elongata_contig52198:2540..29001691679598.538407-CDS-H-elongata_contig52198:2540..2900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52198 2541..2900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52198.12516.1

>prot_H-elongata_contig52198.12516.1 ID=prot_H-elongata_contig52198.12516.1|Name=mRNA_H-elongata_contig52198.12516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
MKNANFSVSPQQALKEGRYLWADRKTRSDVTDSRVMDLARRYWHSDDVSR
ASGDSGQKAMWRPSKKAGEVYHPRRELMVPGDKVHIMFLVWRPYLALKAE
LLLEDDSFTDPGRSTFLSTRCGCLAEPRASQCACEIHTQQSLYLEALGML
MGSMHDNCDCTCRWCEGGEGCKKWLGMCRSLHNFSDEFMCEKVDMLGEDK
EDEFEHWGRRPECVAGKCSNCGFGNPNGIPTDCLALGRAAHRMVGWIRFQ
DQKMEDGKTHKKQQLPQVGPLRDLWDEFMEHSKKYIEHHELAKWQRKAHN
MCLGTFRKGELLIETDFIEKYRHEARYVLTCSTAPTTTIMVSLVHHSPVG
GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYISGEGRAATAGTRVPTV
HMFT
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mRNA from alignment at H-elongata_contig52198:1047..2900+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52198.12516.1 ID=mRNA_H-elongata_contig52198.12516.1|Name=mRNA_H-elongata_contig52198.12516.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1854bp|location=Sequence derived from alignment at H-elongata_contig52198:1047..2900+ (Himanthalia elongata Himel1 dioecious)
ATGAAGAACGCCAACTTTTCCGTCTCACCGCAGCAAGCTTTGAAGGAGGG GCGCTACTTGTGGGCTGACCGTAAGACCAGGAGCGACGTGACAGACTCAC GTGTGATGGACCTGGCGAGGCGGTACTGGCATTCGGACGACGTCTCCCGT GCGTCGGGAGATTCGGGTGAGCTGATGTTGTTTTTGGTGTTGGTGATGAT AGCACTACTGCTGTCGTACTTTGTTGCTGCCATCGCTGCTTCTGTAGTTG CTGTGATGTGCTCTGTTGGTGCGTTCGCTGCTGTAGTTGCTGTTGAGTTC TCTGTTGCGGCCTTCGCTAGTGCTATTGATACTAGTGTTCATGTCGCCGT GCTCTGCTGCTGCTGTTGATGCTGCTGTAGCGTTCATAATTTTGCCGCAC TGCTGCTGTAGCCCCGGGTAATTTACCGCACACTTTTTCTGCCTTCGGCA CCGCAGGGCAAAAGGCAATGTGGAGACCATCCAAGAAAGCTGGCGAGGTG TATCATCCACGCAGAGAGCTCATGGTTCCGGGGGACAAGGTGCACATCAT GTTTCTGGTATGGCGGCCGTATCTGGCACTCAAGGCAGAGCTGCTGCTGG AGGATGACTCTTTCACAGATCCAGGCCGGTCGACCTTCTTGTCTACACGC TGTGGGTGCTTAGGTGTGTGGCCACTAAAAGATGCCGAATATTGGGCTGT GTACGGAAAATACATATTGTTTTCAACACCGGCACCTGTAGGACAGCGCG ATGGAGATCTGACATGTCTGTTTTTTTCCCCTGCTGCCATGTCGATATTT CTTATCTTACGCCTTGCAGCTGAGCCAAGGGCGTCGCAATGTGCTTGCGA GATCCACACGCAGCAGTCGCTTTATCTCGAAGCCCTCGGGATGTTGATGG GATCAATGCATGACAACTGCGACTGCACGTGCAGGTGGTGCGAAGGCGGG GAAGGTTGTAAGAAGTGGTTGGGAATGTGTAGATCTTTGCACAATTTCTC TGACGAATTCATGTGCGAGAAGGTGGACATGTTGGGGGAGGATAAGGAGG ATGAGTTTGAGCACTGGGGGAGGAGGCCGGAGTGCGTTGCGGGCAAGTGT TCAAATTGCGGGTTTGGGAACCCAAATGGCATTCCTACCGACTGTTTGGC TCTCGGTCGCGCGGCACATAGAATGGTGGGATGGATCCGTTTCCAGGATC AAAAGATGGAGGACGGCAAGACGCATAAGAAGCAGCAGCTACCGCAGGTC GGACCGTTGCGTGACCTTTGGGACGAGTTCATGGAGCACTCCAAGAAGGT GAGAAGGTGAACTTATCAACACGACGATTTTTTTCTGTAATTTTCGTATC ACTTGGTCAAAGTGTAATTTTCGTTTGATGTTTCAATCAACAAGTAATTT GGGAGCAGGCACCTGAACTGTTATCCGCTCCCCCCCTCTTCCTCCCTCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCGCAGTACATC GAGCACCATGAACTGGCGAAGTGGCAGCGCAAGGCCCACAACATGTGCTT GGGGACGTTCCGCAAGGGCGAGTTGCTCATCGAGACCGACTTCATCGAGA AATACCGTCACGAAGCCCGCTATGTCTTGACGTGCTCTACCGCGCCCACA ACGACCATCATGGTGTCCCTCGTGCACCATAGCCCTGTCGGTGGCAAGCA CACGACGGATGCATGGGTGTTCGTGTCGAGCGACCCCAACCACGACTTCG ACTTCCACATCTACGCCCTCGACATCATCCTCCAGCACTACATTTCGGGC GAGGGGCGTGCCGCTACTGCTGGAACACGGGTCCCGACGGTGCACATGTT CACC
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Coding sequence (CDS) from alignment at H-elongata_contig52198:1047..2900+

>mRNA_H-elongata_contig52198.12516.1 ID=mRNA_H-elongata_contig52198.12516.1|Name=mRNA_H-elongata_contig52198.12516.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2424bp|location=Sequence derived from alignment at H-elongata_contig52198:1047..2900+ (Himanthalia elongata Himel1 dioecious)
ATGAAGAACGCCAACTTTTCCGTCTCACCGCAGCAAGCTTTGAAGGAGGG
GCGCTACTTGTGGGCTGACCGTAAGACCAGGAGCGACGTGACAGACTCAC
GTGTGATGGACCTGGCGAGGCGGTACTGGCATTCGGACGACGTCTCCCGT
GCGTCGGGAGATTCGGATGAAGAACGCCAACTTTTCCGTCTCACCGCAGC
AAGCTTTGAAGGAGGGGCGCTACTTGTGGGCTGACCGTAAGACCAGGAGC
GACGTGACAGACTCACGTGTGATGGACCTGGCGAGGCGGTACTGGCATTC
GGACGACGTCTCCCGTGCGTCGGGAGATTCGGGGCAAAAGGCAATGTGGA
GACCATCCAAGAAAGCTGGCGAGGTGTATCATCCACGCAGAGAGCTCATG
GTTCCGGGGGACAAGGTGCACATCATGTTTCTGGTATGGCGGCCGTATCT
GGCACTCAAGGCAGAGCTGCTGCTGGAGGATGACTCTTTCACAGATCCAG
GCCGGTCGACCTTCTTGTCTACACGCTGTGGGTGCTTAGGGCAAAAGGCA
ATGTGGAGACCATCCAAGAAAGCTGGCGAGGTGTATCATCCACGCAGAGA
GCTCATGGTTCCGGGGGACAAGGTGCACATCATGTTTCTGGTATGGCGGC
CGTATCTGGCACTCAAGGCAGAGCTGCTGCTGGAGGATGACTCTTTCACA
GATCCAGGCCGGTCGACCTTCTTGTCTACACGCTGTGGGTGCTTAGCTGA
GCCAAGGGCGTCGCAATGTGCTTGCGAGATCCACACGCAGCAGTCGCTTT
ATCTCGAAGCCCTCGGGATGTTGATGGGATCAATGCATGACAACTGCGAC
TGCACGTGCAGGTGGTGCGAAGGCGGGGAAGGTTGTAAGAAGTGGTTGGG
AATGTGTAGATCTTTGCACAATTTCTCTGACGAATTCATGTGCGAGAAGG
TGGACATGTTGGGGGAGGATAAGGAGGATGAGTTTGAGCACTGGGGGAGG
AGGCCGGAGTGCGTTGCGGGCAAGTGTTCAAATTGCGGGTTTGGGAACCC
AAATGGCATTCCTACCGACTGTTTGGCTCTCGGTCGCGCGGCACATAGAA
TGGTGGGATGGATCCGTTTCCAGGATCAAAAGATGGAGGACGGCAAGACG
CATAAGAAGCAGCAGCTACCGCAGGTCGGACCGTTGCGTGACCTTTGGGA
CGAGTTCATGGAGCACTCCAAGAAGCTGAGCCAAGGGCGTCGCAATGTGC
TTGCGAGATCCACACGCAGCAGTCGCTTTATCTCGAAGCCCTCGGGATGT
TGATGGGATCAATGCATGACAACTGCGACTGCACGTGCAGGTGGTGCGAA
GGCGGGGAAGGTTGTAAGAAGTGGTTGGGAATGTGTAGATCTTTGCACAA
TTTCTCTGACGAATTCATGTGCGAGAAGGTGGACATGTTGGGGGAGGATA
AGGAGGATGAGTTTGAGCACTGGGGGAGGAGGCCGGAGTGCGTTGCGGGC
AAGTGTTCAAATTGCGGGTTTGGGAACCCAAATGGCATTCCTACCGACTG
TTTGGCTCTCGGTCGCGCGGCACATAGAATGGTGGGATGGATCCGTTTCC
AGGATCAAAAGATGGAGGACGGCAAGACGCATAAGAAGCAGCAGCTACCG
CAGGTCGGACCGTTGCGTGACCTTTGGGACGAGTTCATGGAGCACTCCAA
GAAGTACATCGAGCACCATGAACTGGCGAAGTGGCAGCGCAAGGCCCACA
ACATGTGCTTGGGGACGTTCCGCAAGGGCGAGTTGCTCATCGAGACCGAC
TTCATCGAGAAATACCGTCACGAAGCCCGCTATGTCTTGACGTGCTCTAC
CGCGCCCACAACGACCATCATGGTGTCCCTCGTGCACCATAGCCCTGTCG
GTGGCAAGCACACGACGGATGCATGGGTGTTCGTGTCGAGCGACCCCAAC
CACGACTTCGACTTCCACATCTACGCCCTCGACATCATCCTCCAGCACTA
CATTTCGGGCGAGGGGCGTGCCGCTACTGCTGGAACACGGGTCCCGACGG
TGCACATGTTCACCTACATCGAGCACCATGAACTGGCGAAGTGGCAGCGC
AAGGCCCACAACATGTGCTTGGGGACGTTCCGCAAGGGCGAGTTGCTCAT
CGAGACCGACTTCATCGAGAAATACCGTCACGAAGCCCGCTATGTCTTGA
CGTGCTCTACCGCGCCCACAACGACCATCATGGTGTCCCTCGTGCACCAT
AGCCCTGTCGGTGGCAAGCACACGACGGATGCATGGGTGTTCGTGTCGAG
CGACCCCAACCACGACTTCGACTTCCACATCTACGCCCTCGACATCATCC
TCCAGCACTACATTTCGGGCGAGGGGCGTGCCGCTACTGCTGGAACACGG
GTCCCGACGGTGCACATGTTCACC
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