mRNA_H-elongata_contig51325.12392.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51325.12392.1
Unique NamemRNA_H-elongata_contig51325.12392.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: D8LKA2_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA2_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.030e-89
Identity = 226/421 (53.68%), Postives = 258/421 (61.28%), Query Frame = 1
Query:    1 AKTICILSTRKFGPSDAVAFSNALAENTSLVELLASGHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALVEGLRRNHGLLVLDLEYKSISAGDALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAG---------------HPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRT------DGQLV-----------GKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKAAGRVLRVLDLGGNSLSGEGVKAVLSAPGLREARLFYNVCGDDGVPLVLEALRAGSVLETLDLGANGL 1167
            A T+CILSTRKFGPS+A AFS AL+ NTSL ELLASGHPL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX          HGLLVLDLEYKSI++G+ L TLL+ HP+LA+L+LGRNQLGE G K LS GL  +STL RLD+SGN+L+AAA EA+GRALC   P+    + G    G                  LEFLD+SRN LGDEGG AL R LAT    S TL  L +AEA LG   AAALA  L P      A+    GGG +       G++                GL +L+ LD+SKN+LG  G  E+AGALSRGGAP L TL M YN VGD GAA                                 LREA+LF+N C D+GVPLVLEAL AG  L+TLDLGANGL
Sbjct:   22 ASTMCILSTRKFGPSEAAAFSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLNSTLLRLDVSGNQLNAAAAEALGRALCTHRPAAIGNQTGTSAVGGSDXXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGAALFRALAT----SPTLTGLVLAEAKLGPLAAAALAEALVPPP----ASPLPGGGGPSGPAEPDSGEMTPLPXXXXXXXXXNGGGLQKLQALDVSKNELGTGGGAEVAGALSRGGAPRLETLSMAYNDVGDDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREAKLFHNACKDEGVPLVLEALLAGGTLQTLDLGANGL 434          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: A0A7S2SI57_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SI57_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.970e-18
Identity = 132/407 (32.43%), Postives = 188/407 (46.19%), Query Frame = 1
Query:    4 KTICILSTRKFGPSDAVAFSNALAENTSLVELLASGHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALVEGLRRNHGLLVLDLEYKSISAG--DALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLR--EGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKAAGRVLRVLDLGGNSLSGE------GVKAVLSAPGLREARLFYNVCGDDGVPLVLEALRAGSVLETLDLGANGLTGAGFEQLL 1194
            +T+ ILS R FG  + +AF  ALA NTSL ELL SGH  XXXXXXXXXXXXXXXXXXXXX             AL      N  L  ++LEYKS+  G  +A+ + L+   +L  + LGRN L +   + LS G++ S +++ + L  N L A   + +G +L         LR  EG + A       LD     +G EG      TL +G G    +  ++++  G+G     AL A                        +  K      L+ L++S+NKL  + A     AL       L  L +  N +   G   L +  G+ L++LDL  N ++ E       +   ++  GL E RL  N  GD G  +V + LRA + ++ L L    LT  G E +L
Sbjct:   23 ETMLILSNRSFGDKETIAFCKALATNTSLKELLCSGHXXXXXXXXXXXXXXXXXXXXXXXGLGNSNFGDKGVAALFANWE-NSTLTHIELEYKSLGQGAMEAISSALQRENALESILLGRNGLNDTHVEVLSKGIQASPSINHICLKSNVLSATGCKHVGDSL--------RLRDCEGFKLA-------LD-DNERIGCEG----LETLVSGNGTGPVVTEMSLSGCGIGDDGVQALCA-----------------------SMTAKGSCFSSLQVLNISRNKLTESSAEAFGNALKHN--EKLRKLYLARNAIKVDGFFKLSQNLGK-LQLLDLSANGITSEDSGVLDSIMVNIAKSGLVELRLLGNKIGDAGALVVCKGLRANTTIKHLSLAGIELTAKGCEAIL 382          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: A0A2K6FGK9_PROCO (Ribonuclease inhibitor n=5 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6FGK9_PROCO)

HSP 1 Score: 71.2 bits (173), Expect = 9.390e-10
Identity = 100/315 (31.75%), Postives = 138/315 (43.81%), Query Frame = 1
Query:  220 RALVEGLR--RNHGLLVLDLEYKSISAG--DALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKLDAAAVEAIG-RALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLP--QLRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKAAGR---VLRVLDLGGNSLSGEG----VKAVLSAPGLREARLFYNVCGDDGVPLVLEALR 1122
            R L EGL   R H L  L LEY +++A   + L ++L+  P   EL L  N LGE G + L  GL+ S+      L   KL++  V A   R LC  + S A LRE            LDL  N LGD G   LC  L   L  S  L+ L + E G+ A     L  VL     +   +      G    +L+ +    P  QL +L +    L A      +  L++  + L   L M  N +GD G   LG+   +   VLRVL +G   ++  G       +L+   LRE  L  N  GD GV  ++E+LR
Sbjct:  126 RLLCEGLLDPRCH-LERLQLEYCNLTAASCEPLASVLRAKPDFKELMLSNNDLGEAGVRVLCQGLQDSTC----QLESLKLESCGVTAANCRDLCGVVASKASLRE------------LDLGSNQLGDAGLAELCSGL---LRPSSRLRTLWLWECGITAEGCRELCRVLRAKESLKELSLSGNELGDAGARLLCESLLEPGCQLESLWVKTCGLTAACCPHFSSVLAQNKSLL--ELQMSSNKLGDAGVRELGQGLRQPSSVLRVLWIGDCEVTDGGCGSLASTLLANRSLRELDLSNNCMGDPGVLQLIESLR 418          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: UPI0003290E76 (ribonuclease inhibitor n=1 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI0003290E76)

HSP 1 Score: 68.9 bits (167), Expect = 5.630e-9
Identity = 106/350 (30.29%), Postives = 143/350 (40.86%), Query Frame = 1
Query:  220 RALVEGLRRNH-GLLVLDLEYKSISAG--DALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGL-RCSSTLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGA-----------------PLLGTLL----------MGYNGVGDKGAATLGKAAG---RVLRVLDLGGNSLSGEGVKAV----LSAPGLREARLFYNVCGDDGVPLVLEALRA-GSVLETLDL 1152
            R L EGL+     L  L L+Y  ++A   +AL   L+   S  EL L  N +GE G + L   L  C+S L +L L G  + AA  E + R +                A    L+ LDL  N LGD G  ALC  L   LG   +L+ L + E  +              TA+          G R   +L+   +    LR L L+ N+LG  GA  L  +L   G                  P  G++L          +  N +GD G  TL +  G     LRVL LG   ++  G  A+    LS PGLRE  L  N  GD GV  ++ +L+  G  LE L L
Sbjct:  125 RLLCEGLQDPQCNLEKLKLQYCDLTAAGCEALAAALRTKASFRELGLSNNDVGEAGVRALCRCLVECASPLEKLRLEGCGVTAANCEDLSRVV----------------AAKASLQELDLGENRLGDAGLAALCPAL---LGPDCSLRILWLWECDI--------------TAE----------GCRDVCRLL---RAKDSLRELSLAGNQLGDEGARLLCESLREPGCRLESLWVKSCGFTAACCPHFGSMLGHNKSLLELQLSGNALGDAGVQTLCQGLGLPGSALRVLWLGDCEVTDRGCAALAALLLSCPGLRELDLSNNPMGDPGVLQLVGSLQQPGCGLEQLVL 428          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: G3SPV7_LOXAF (Ribonuclease inhibitor n=5 Tax=Loxodonta africana TaxID=9785 RepID=G3SPV7_LOXAF)

HSP 1 Score: 67.8 bits (164), Expect = 1.250e-8
Identity = 96/327 (29.36%), Postives = 132/327 (40.37%), Query Frame = 1
Query:  262 VLDLEYKSISAGDALCTLLKDH----PSLAELKLGRNQLGEPGAKDLSMGLRCSST-LSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKA--AGRVLRVLDLGGNSLSGEGVKAVLSA---PGLREARLFYNVCG--DDGVPLVLEALRAGSVLETLDLGANGLTGAGFEQLLPGLA 1206
            +  L  ++ S   A CT+L       P+L EL+L  N LG+ G + L  GLR     L R+ L    L AA+ E     L   LP+   LRE            L LS N LG+ G   LCR L   LGA+  L+ L +A  G+ A     L ++++ T D                           L+ LDL ++KLG  G   L   L    + L  TL +    +  +G   + +   A   L+ L L GN L  +G + +  A   PG R   L+   CG  D   P     L     L  L L  N L   G +QL  GL+
Sbjct:   87 ICKLSLQNCSLTAACCTVLPGTLRWLPTLLELRLSDNPLGDEGLQLLCEGLRDPQCHLERVQLEYCNLTAASCEP----LAAVLPAKLGLRE------------LVLSNNDLGEAGVQVLCRGL---LGATCPLETLKLASCGVTAANCKDLCSIVA-TKD--------------------------SLQELDLGESKLGDAGMAALCPGLLSPSSKLK-TLWLWECDISSEGCREISQVLRAKESLKELSLMGNELGDQGARLLCEALREPGCRLESLWVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDTGVQQLCQGLS 366          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: A0A1V9Z111_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z111_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.640e-8
Identity = 92/341 (26.98%), Postives = 144/341 (42.23%), Query Frame = 1
Query:  226 LVEGLRRNHGLLV--LDLEYKSIS--AGDALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKAAGRVLRVLDLGGNSLSGEGVKAVLSAPGLREARLFYNVCGDDGVPLVLEALRAGSVLETLDLGANGLTGAGFEQLLPGLAACPGLQTLEV 1236
            L  GL  N    +   D+E KSI      A+  +L  + S+ +L + RN++  PG + L +GL  S+ L  LD++ N L     +        S P+ +             L+ ++++ N LGD       ++LA     + ++++L ++   L +   AAL   LS  +               D  + G  Q     R L L+K KLG   A +L                               KA   +L  LDL  N+L+  G+   L++P ++E R+F N  G+ GV  VL  + A  VL++LD+GANGL G     L   L     L+TLEV
Sbjct:   96 LCNGLGNNSNSKIESFDMELKSIGNDGASAMGEILAKNNSIRQLVVARNRIQTPGFEQLVLGLNASNYLEELDIAENNLTLLNEDGSNLVQWISKPNCS-------------LKIVNIAGNPLGDS-AVVFLKSLAI----NTSIESLNLSSTELTSAAWAALGYALSKNSXXXXXXXXXXXXXXXDEFITGVAQNKGLTR-LVLAKTKLGDEVAKKL-------------------------------KAPSSLLH-LDLSANNLTSIGMLPHLASP-IQELRVFDNSLGN-GVYDVLPTIVANPVLQSLDVGANGLHGKLSIALFEALHIPTALKTLEV 383          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: UPI0007A6E2E8 (ribonuclease inhibitor n=1 Tax=Miniopterus natalensis TaxID=291302 RepID=UPI0007A6E2E8)

HSP 1 Score: 66.6 bits (161), Expect = 2.980e-8
Identity = 92/311 (29.58%), Postives = 131/311 (42.12%), Query Frame = 1
Query:  304 LCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGL---RCSSTLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELA-GALSRGGAPLLGTLLMGYNGVGDKGAATLGKA--AGRVLRVLDLGGNSLSGEGVKAV---LSAPGLREARLFYNVCGDDGV--PLVLEALRAGSVLETLDLGANGLTGAGFEQLLPGL 1203
            L ++L+  PSL EL L  NQLG+ G + L  GL   +C   + RL L  + L AA+ E          P  + LR   E      L+ L ++ N +G+ GG ALCR LA    ++  L++L +   GL                  + AN +          L G       LRTL+L  NKLG  G  EL  G LS   +  L TL +    +   G   L +   A   L+ L L GN++  EG++ +   L  P  +   L+   C       P V   L     L+ L + +N L   G E+L  GL
Sbjct:  109 LSSVLRSLPSLCELDLSYNQLGDAGLRLLCEGLLDPQCH--IERLQLEYSNLTAASCE----------PLASVLRAKRE------LKELGVNNNDIGEAGGQALCRGLAE---STCPLESLKLEGCGL------------------TSANCQ---------DLCGIVAAKASLRTLELGNNKLGDAGITELCPGLLSP--SSRLKTLWLWECDITVSGCRDLCRVLRAKESLKELSLAGNAVGNEGIQLLCESLVQPSCQLESLWVKSCSLTAACCPRVGAMLAQNRSLQELQMSSNNLGDVGVEELCQGL 369          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: H0X4W2_OTOGA (Ribonuclease inhibitor n=3 Tax=Otolemur garnettii TaxID=30611 RepID=H0X4W2_OTOGA)

HSP 1 Score: 65.9 bits (159), Expect = 5.190e-8
Identity = 99/334 (29.64%), Postives = 133/334 (39.82%), Query Frame = 1
Query:  265 LDLEYKSISAGDA--LCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKLDAAAVEAIG-RALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTEREGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGA-----------------PLLGTLL----------MGYNGVGDKGAATLGKAAGR---VLRVLDLGGNSLSGEGVKAVLSA----PGLREARLFYNVCGDDGVPLVLEALRA-GSVLETLDL 1152
            L LEY +++A     L ++L+  P   EL +  N L E G + L  GL+ S+      L   KL+   V A   R LC ++ S               L+ LDL  N LGD G T LC+ L   L  S  L+ L + E G+ A     L  +L                             L  LR L L+ N+LG  GA  L  +L   G                  PL  ++L          M  N +GD G  TL +  G+   VLRVL LG   +S  G  ++ S       LRE  L  N  GD+GV  ++ +LR  G  LE L L
Sbjct:  144 LQLEYCNLTAASCEFLASVLRAKPDFKELIVSNNDLSEAGVRTLCQGLKDSAC----PLEALKLENCGVTAANCRDLCSAVASKTS------------LQALDLGSNRLGDAGLTELCQGL---LRPSFRLRTLWLWECGITAEGCHELCRMLCS---------------------------LESLRELSLAGNELGDAGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDVGVQTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANHSLRELDLSNNRMGDEGVRQLMGSLRQPGCALEQLVL 431          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: A0A1S3AL26_ERIEU (Ribonuclease inhibitor n=2 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3AL26_ERIEU)

HSP 1 Score: 65.9 bits (159), Expect = 5.540e-8
Identity = 105/348 (30.17%), Postives = 133/348 (38.22%), Query Frame = 1
Query:  220 RALVEGLRRNHGLLV-LDLEYKSISAGD--ALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCS-STLSRLDLSGNKLDAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATG-------------------------LGASRTLKNLAMA------EAGLGAGTAAALAAVLSPTADVSGANTER---EGGGRTDGQLVGKQQGLPQ---LRTLDLSKNKLGANGAVELAGALSRGGAPLLGTLLMGYNGVGDKGAATLGKAAG--RVLRVLDLGGNSLSGEGVKAVLSAPGLREARL----FYNVCGDDGVPLVLEALR 1122
            R L EGLR     L  L LEY  ++A    AL  +L+D P + EL L  N+LG+ G ++L   L    S L  L     KLD+           C L   A     G  +  P L  LDL  N LGD G  ALC                               LGA  TL+ L++A      +AG G         +L  T    G   E    +  G T          L +   L+ L LS N+LG  G  EL  AL + GA L   L +G   V D G  +L       R LR LDL  N L   GV  +L      E  L     Y++   + V   L+AL 
Sbjct:  159 RLLCEGLRAPQCHLERLQLEYCGLTAAGCGALAAVLRDKPDVKELVLSNNELGDAGMRELVRSLAAGPSALETL-----KLDS-----------CGLGPEACSELSGLLSAKPSLRELDLGSNALGDAGVAALCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLGAKETLRELSLAGNEELGDAGCG---------LLCETLLGGGCQLETLWVKSCGLTAASCPAWASVLTRTQKLQELQLSGNRLGDTGVRELCEALGQPGATLR-VLWLGDCEVTDSGCESLASLLRDTRSLRELDLSNNGLGDAGVLLLLGCLERPECPLEQLVLYDIYWTEAVEQQLQALE 480          
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Match: A0A1W4X4J4_AGRPL (dynein regulatory complex subunit 5 n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X4J4_AGRPL)

HSP 1 Score: 65.5 bits (158), Expect = 7.180e-8
Identity = 56/166 (33.73%), Postives = 77/166 (46.39%), Query Frame = 1
Query:  220 RALVEGLRRNHGLLVLDLEYKSISAGDALCT--LLKDHPSLAELKLGRNQLGEPGAKDLSMGL--RCSSTLSRLDLSGNKLDAAAVEAIGRALC------------CSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGTALCRTLATGLGASRTLKNLAMAE 669
            +AL++ L +N  L+ LDL +  I    A C   L+  HP L  LKL  N +G+ GA+ +   L       L  LD+  N L       I R+L             C +     +R G     +  LEFLD+S N LGDEGG A+ R L      +RTLKN+ + E
Sbjct:  258 QALMQCLLQNETLVELDLSHDHIGDHGAKCIAKLMTVHPKLNILKLTNNFIGQEGAEAIGFALLQETCCPLVLLDMRLNPLKHDGAMGILRSLVRGEKPKELSLASCEIEDVTAMRVGQMMCLNHTLEFLDVSSNWLGDEGGEAILRCLMN----NRTLKNIDLRE 419          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51325.12392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKA2_ECTSI1.030e-8953.68Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A7S2SI57_9STRA5.970e-1832.43Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2K6FGK9_PROCO9.390e-1031.75Ribonuclease inhibitor n=5 Tax=Lemuriformes TaxID=... [more]
UPI0003290E765.630e-930.29ribonuclease inhibitor n=1 Tax=Dasypus novemcinctu... [more]
G3SPV7_LOXAF1.250e-829.36Ribonuclease inhibitor n=5 Tax=Loxodonta africana ... [more]
A0A1V9Z111_9STRA2.640e-826.98Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
UPI0007A6E2E82.980e-829.58ribonuclease inhibitor n=1 Tax=Miniopterus natalen... [more]
H0X4W2_OTOGA5.190e-829.64Ribonuclease inhibitor n=3 Tax=Otolemur garnettii ... [more]
A0A1S3AL26_ERIEU5.540e-830.17Ribonuclease inhibitor n=2 Tax=Erinaceus europaeus... [more]
A0A1W4X4J4_AGRPL7.180e-833.73dynein regulatory complex subunit 5 n=1 Tax=Agrilu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51325contigH-elongata_contig51325:1238..3668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.0
Seed ortholog evalue5.3e-77
Seed eggNOG ortholog2880.D8LKA2
EggNOG free text desc.interleukin-8 biosynthetic process
EggNOG OGsKOG4308@1,KOG4308@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-01_009510.1
Exons4
Model size1236
Cds size1236
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51325.12392.1prot_H-elongata_contig51325.12392.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51325 1238..3668 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930840.2298224-CDS-H-elongata_contig51325:1237..14501622930840.2298224-CDS-H-elongata_contig51325:1237..1450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 1238..1450 +
1691679592.7406814-CDS-H-elongata_contig51325:1237..14501691679592.7406814-CDS-H-elongata_contig51325:1237..1450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 1238..1450 +
1622930840.2475789-CDS-H-elongata_contig51325:1925..20511622930840.2475789-CDS-H-elongata_contig51325:1925..2051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 1926..2051 +
1691679592.7518346-CDS-H-elongata_contig51325:1925..20511691679592.7518346-CDS-H-elongata_contig51325:1925..2051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 1926..2051 +
1622930840.2654629-CDS-H-elongata_contig51325:2239..29931622930840.2654629-CDS-H-elongata_contig51325:2239..2993Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 2240..2993 +
1691679592.7592702-CDS-H-elongata_contig51325:2239..29931691679592.7592702-CDS-H-elongata_contig51325:2239..2993Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 2240..2993 +
1622930840.28111-CDS-H-elongata_contig51325:3525..36681622930840.28111-CDS-H-elongata_contig51325:3525..3668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 3526..3668 +
1691679592.7670238-CDS-H-elongata_contig51325:3525..36681691679592.7670238-CDS-H-elongata_contig51325:3525..3668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51325 3526..3668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51325.12392.1

>prot_H-elongata_contig51325.12392.1 ID=prot_H-elongata_contig51325.12392.1|Name=mRNA_H-elongata_contig51325.12392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=412bp
AKTICILSTRKFGPSDAVAFSNALAENTSLVELLASGHPLGRAEAASFGD
ALSKNSTLRSLCLGDNSFGNEGVRALVEGLRRNHGLLVLDLEYKSISAGD
ALCTLLKDHPSLAELKLGRNQLGEPGAKDLSMGLRCSSTLSRLDLSGNKL
DAAAVEAIGRALCCSLPSPADLREGGEKAGHPPLEFLDLSRNHLGDEGGT
ALCRTLATGLGASRTLKNLAMAEAGLGAGTAAALAAVLSPTADVSGANTE
REGGGRTDGQLVGKQQGLPQLRTLDLSKNKLGANGAVELAGALSRGGAPL
LGTLLMGYNGVGDKGAATLGKAAGRVLRVLDLGGNSLSGEGVKAVLSAPG
LREARLFYNVCGDDGVPLVLEALRAGSVLETLDLGANGLTGAGFEQLLPG
LAACPGLQTLEV
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mRNA from alignment at H-elongata_contig51325:1238..3668+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51325.12392.1 ID=mRNA_H-elongata_contig51325.12392.1|Name=mRNA_H-elongata_contig51325.12392.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2431bp|location=Sequence derived from alignment at H-elongata_contig51325:1238..3668+ (Himanthalia elongata Himel1 dioecious)
GCAAAAACGATTTGCATCCTGAGCACGAGGAAGTTTGGGCCGTCGGATGC GGTTGCTTTTTCCAATGCCCTCGCGGAAAACACCTCCTTGGTCGAGCTGC TCGCATCCGGGCACCCCCTGGGACGGGCGGAGGCCGCATCCTTTGGGGAT GCCTTGTCGAAGAACTCGACACTCCGGTCGCTGTGCCTGGGAGACAACAG CTTCGGCAACGAGGTGAGGTGTGAGGTGCGCGCGTTAGAAATCACCCAAA CGCCGTGTGTGGTTATTTTGTTTGCTATGCCGCAGCCACGATTTTTGGGT TATTCGTGGATGTGCGTTAGACGGTTAATTATAGTTTCATTATATTGTAC ACATAGTCTCTACGTTTTGAATGTAGGTGGATTTTTTTACTTCGAAGCGC TGCTATCACTGTCTGCAACGATTCCAATGGTGGTGACGGGTATGTGGCTG CGCTCTTTCGACAGTCGTCGGTCGCAATCTACCGTTAGGTCTCAGTCCCT GTGGCCTTACAACGAATGAAAAACGAATAAAAGAAGAGAGAAAGAGGAGG AGCACGAAGGCGTTCGGGGAAGGTGGTGGCTTTTCTCCCTCACCCCCCCC CAATGCCTCTGACCGAATATTCGATGCTCGCCTTGCTTGCTTGCGTGCGT GTATGCGTTCGCCGTTTAACGACGCCGGGGTGTGGCAGGGCGTGCGAGCG CTGGTGGAAGGACTGCGGCGAAACCACGGCCTTCTGGTTCTGGATCTCGA GTATAAGTCGATCTCCGCCGGCGATGCCCTTTGCACACTGCTCAAGGATC ACCCTTCCCTGGCGGTGAGGAGTTGTAACGATGGGGACACTTACTGTGAC TGCCAGCGTACCCGTCACTGGACGGGTGGCCATTTTAACCAGATGGTTTC CACCACATCTTCCCCCATCCAGCTGAGGGTCTCAACTCATACACAAGTAC ATTTTTTCAAGTCTTACACACCTTCATACCCCGCGCTTCATATCCTATGT AGGAGCTAAAGCTTGGTCGCAACCAGCTCGGCGAGCCTGGCGCGAAGGAC CTGTCCATGGGCTTGCGCTGCAGCTCGACCCTCTCGCGCCTCGATCTCTC GGGCAACAAGCTCGATGCGGCCGCAGTGGAAGCCATCGGTCGCGCCCTCT GCTGCTCTTTGCCGTCGCCGGCCGATCTCCGGGAGGGCGGGGAGAAGGCA GGCCACCCTCCCCTGGAATTCTTGGACTTATCCAGGAATCACCTGGGGGA CGAAGGTGGCACCGCGCTTTGCCGTACTCTTGCCACCGGTCTCGGGGCGT CAAGGACTCTCAAGAATCTCGCTATGGCAGAGGCCGGGCTAGGGGCAGGA ACTGCGGCTGCCCTTGCTGCGGTGCTCTCTCCTACTGCGGACGTTTCAGG CGCCAACACCGAGAGAGAGGGAGGAGGACGGACGGATGGACAACTAGTGG GGAAGCAGCAAGGTCTCCCGCAGCTCAGGACCCTGGATCTGTCGAAGAAC AAGCTCGGGGCAAATGGCGCCGTGGAGCTGGCAGGGGCCCTGTCGCGAGG CGGGGCTCCCCTTCTTGGGACTCTCTTGATGGGGTACAATGGCGTGGGAG ACAAAGGAGCGGCAACGCTGGGTAAGGCAGCAGGGAGAGTGCTACGTGTT TTGGACCTGGGTGGGAACTCGTTGAGCGGGGAAGGGGTAAAGGCGGTGCT GTCTGCCCCCGGCCTCAGAGAGGCGAGGTTGTTCTACAATGTCTGCGGTG ACGATGGTGAGAGTAACCGTGTTCTTACGCGCTGTCGGATGTGTTTGCAA TTGTTATTATTATTTTTATTATTAGGTATTCTTGTCACGGTGATCAGTTT TGTTGGGTTTGTTTGACCCAGCCGCCCCCATCGTACACACCCGTTTGCAC GCTTTAGAAAACCATCCTTCCAGATCTTCGTATACAGCAAAAATTATATA TAGAGATGTATCGGGGAAATTGGTCCATGATAACGCTCCTTTTATACGCC TCCGTAACATTTTTTCAGAGATGGTTTTAATAAGTGAACTTTTTTACAAA AAAATGCCATTTTTCAGTTCCAAAACTATCGAGGTTTGCAAAAACGATGC CTGATAGCGGAGGAGGGTTGGGGGGGGGGAGGCTCTAAGGCGTGTTGTTT TAGTTTATTGCTGCGCAAAATGTGTCATGATGTGTTCTGTTCGTTAAAGA TGGAAACACGGCACGAACCAATGCCTTGTGGCCCCCCTGACGGAAGAGCT TACGGGTGAACCTTTCTCTTCTCGGTCGGCATCCACAGGAGTTCCTCTCG TGTTGGAAGCATTGCGCGCCGGCAGTGTACTGGAAACGCTGGACTTGGGC GCCAATGGTCTCACGGGCGCAGGGTTTGAGCAGCTGCTTCCCGGACTGGC CGCCTGCCCAGGATTGCAAACGCTAGAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig51325:1238..3668+

>mRNA_H-elongata_contig51325.12392.1 ID=mRNA_H-elongata_contig51325.12392.1|Name=mRNA_H-elongata_contig51325.12392.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2472bp|location=Sequence derived from alignment at H-elongata_contig51325:1238..3668+ (Himanthalia elongata Himel1 dioecious)
GCAAAAACGATTTGCATCCTGAGCACGAGGAAGTTTGGGCCGTCGGATGC
GGTTGCTTTTTCCAATGCCCTCGCGGAAAACACCTCCTTGGTCGAGCTGC
TCGCATCCGGGCACCCCCTGGGACGGGCGGAGGCCGCATCCTTTGGGGAT
GCCTTGTCGAAGAACTCGACACTCCGGTCGCTGTGCCTGGGAGACAACAG
CTTCGGCAACGAGGCAAAAACGATTTGCATCCTGAGCACGAGGAAGTTTG
GGCCGTCGGATGCGGTTGCTTTTTCCAATGCCCTCGCGGAAAACACCTCC
TTGGTCGAGCTGCTCGCATCCGGGCACCCCCTGGGACGGGCGGAGGCCGC
ATCCTTTGGGGATGCCTTGTCGAAGAACTCGACACTCCGGTCGCTGTGCC
TGGGAGACAACAGCTTCGGCAACGAGGGCGTGCGAGCGCTGGTGGAAGGA
CTGCGGCGAAACCACGGCCTTCTGGTTCTGGATCTCGAGTATAAGTCGAT
CTCCGCCGGCGATGCCCTTTGCACACTGCTCAAGGATCACCCTTCCCTGG
CGGGCGTGCGAGCGCTGGTGGAAGGACTGCGGCGAAACCACGGCCTTCTG
GTTCTGGATCTCGAGTATAAGTCGATCTCCGCCGGCGATGCCCTTTGCAC
ACTGCTCAAGGATCACCCTTCCCTGGCGGAGCTAAAGCTTGGTCGCAACC
AGCTCGGCGAGCCTGGCGCGAAGGACCTGTCCATGGGCTTGCGCTGCAGC
TCGACCCTCTCGCGCCTCGATCTCTCGGGCAACAAGCTCGATGCGGCCGC
AGTGGAAGCCATCGGTCGCGCCCTCTGCTGCTCTTTGCCGTCGCCGGCCG
ATCTCCGGGAGGGCGGGGAGAAGGCAGGCCACCCTCCCCTGGAATTCTTG
GACTTATCCAGGAATCACCTGGGGGACGAAGGTGGCACCGCGCTTTGCCG
TACTCTTGCCACCGGTCTCGGGGCGTCAAGGACTCTCAAGAATCTCGCTA
TGGCAGAGGCCGGGCTAGGGGCAGGAACTGCGGCTGCCCTTGCTGCGGTG
CTCTCTCCTACTGCGGACGTTTCAGGCGCCAACACCGAGAGAGAGGGAGG
AGGACGGACGGATGGACAACTAGTGGGGAAGCAGCAAGGTCTCCCGCAGC
TCAGGACCCTGGATCTGTCGAAGAACAAGCTCGGGGCAAATGGCGCCGTG
GAGCTGGCAGGGGCCCTGTCGCGAGGCGGGGCTCCCCTTCTTGGGACTCT
CTTGATGGGGTACAATGGCGTGGGAGACAAAGGAGCGGCAACGCTGGGTA
AGGCAGCAGGGAGAGTGCTACGTGTTTTGGACCTGGGTGGGAACTCGTTG
AGCGGGGAAGGGGTAAAGGCGGTGCTGTCTGCCCCCGGCCTCAGAGAGGC
GAGGTTGTTCTACAATGTCTGCGGTGACGATGGAGCTAAAGCTTGGTCGC
AACCAGCTCGGCGAGCCTGGCGCGAAGGACCTGTCCATGGGCTTGCGCTG
CAGCTCGACCCTCTCGCGCCTCGATCTCTCGGGCAACAAGCTCGATGCGG
CCGCAGTGGAAGCCATCGGTCGCGCCCTCTGCTGCTCTTTGCCGTCGCCG
GCCGATCTCCGGGAGGGCGGGGAGAAGGCAGGCCACCCTCCCCTGGAATT
CTTGGACTTATCCAGGAATCACCTGGGGGACGAAGGTGGCACCGCGCTTT
GCCGTACTCTTGCCACCGGTCTCGGGGCGTCAAGGACTCTCAAGAATCTC
GCTATGGCAGAGGCCGGGCTAGGGGCAGGAACTGCGGCTGCCCTTGCTGC
GGTGCTCTCTCCTACTGCGGACGTTTCAGGCGCCAACACCGAGAGAGAGG
GAGGAGGACGGACGGATGGACAACTAGTGGGGAAGCAGCAAGGTCTCCCG
CAGCTCAGGACCCTGGATCTGTCGAAGAACAAGCTCGGGGCAAATGGCGC
CGTGGAGCTGGCAGGGGCCCTGTCGCGAGGCGGGGCTCCCCTTCTTGGGA
CTCTCTTGATGGGGTACAATGGCGTGGGAGACAAAGGAGCGGCAACGCTG
GGTAAGGCAGCAGGGAGAGTGCTACGTGTTTTGGACCTGGGTGGGAACTC
GTTGAGCGGGGAAGGGGTAAAGGCGGTGCTGTCTGCCCCCGGCCTCAGAG
AGGCGAGGTTGTTCTACAATGTCTGCGGTGACGATGGAGTTCCTCTCGTG
TTGGAAGCATTGCGCGCCGGCAGTGTACTGGAAACGCTGGACTTGGGCGC
CAATGGTCTCACGGGCGCAGGGTTTGAGCAGCTGCTTCCCGGACTGGCCG
CCTGCCCAGGATTGCAAACGCTAGAGGTGGAGTTCCTCTCGTGTTGGAAG
CATTGCGCGCCGGCAGTGTACTGGAAACGCTGGACTTGGGCGCCAATGGT
CTCACGGGCGCAGGGTTTGAGCAGCTGCTTCCCGGACTGGCCGCCTGCCC
AGGATTGCAAACGCTAGAGGTG
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