mRNA_H-elongata_contig115609.1233.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig115609.1233.1
Unique NamemRNA_H-elongata_contig115609.1233.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 186 bits (471), Expect = 2.610e-50
Identity = 102/234 (43.59%), Postives = 144/234 (61.54%), Query Frame = 1
Query:    1 ISSMVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIEKKPLGVE------GISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            I  M+PY +N YAREPP+LL+  D  G+ V  SA GVQQGC LGPLCYSAG LK+L++FRANPP+ G + ++FIDD+ V+ P     + AA E     ++      G++LNR K + L   G   +   E+ R  ++ T L V   GMR+VGVPVG   + +        GEPT+L++ +  + DAQAS QILR S  +RL+ LL ++PP +  +AA+ +D  VE  L +I+ G
Sbjct: 1316 IPPMLPYATNIYAREPPKLLYKTDS-GMAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNG 1548          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.820e-47
Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   10 MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +V Y  N YAR   +LLF ++   +EV  S RGVQQGC LG   +  G L I+KEF   PP+PGV+ + ++DD+    PP L  +M AI       ++ L  +GI L+  K + L   G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+ V K   G+P EL+  L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D ++ WA++ I+ G
Sbjct:  283 LVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.320e-47
Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   10 MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +V Y  N YAR   +LLF ++   +EV  S RGVQQGC LG   +  G L I+KEF   PP+PGV+ + ++DD+    PP L  +M AI       ++ L  +GI L+  K + L   G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+ V K   G+P EL+  L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D ++ WA++ I+ G
Sbjct:  283 LVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.520e-47
Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   10 MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +V Y  N YAR   +LLF ++   +EV  S RGVQQGC LG   +  G L I+KEF   PP+PGV+ + ++DD+    PP L  +M AI       ++ L  +GI L+  K + L   G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+ V K   G+P EL+  L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D ++ WA++ I+ G
Sbjct:  131 LVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 361          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.440e-45
Identity = 98/231 (42.42%), Postives = 134/231 (58.01%), Query Frame = 1
Query:   10 MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +V Y  N YAR   +LLF ++   +EV  S RGVQQGC LG   +  G L I+KEF   PP+PG + + ++DD+ V  PP L  ++ AI       +  L  +GI L+  K + L   G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR  V     G P EL+R L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D L+ WA++ I+ G
Sbjct:  283 LVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 513          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.010e-43
Identity = 94/231 (40.69%), Postives = 131/231 (56.71%), Query Frame = 1
Query:   10 MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +  Y  N YAR   +LLF ++   +EV  S RGVQQGC LG   +  G L I+KEF   PP+PG + + ++DD+ V  PP L  ++ AI       +  L  +GI L+  K   L   G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR  V     G P EL+  L  + D Q S+Q+LR+S   RL HLL T+ PSI   AA  +D+L+ WA++ I+ G
Sbjct:  131 LAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLG 361          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 4.700e-42
Identity = 88/212 (41.51%), Postives = 122/212 (57.55%), Query Frame = 1
Query:   67 LDGRGLEVAESARGVQQGCPLGPLCYSAGSLKILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            ++   +E+  S RGVQQGC LG   +S G L  +KEF   PP+PG + + ++DD+ V  PP L  ++ AI       +  L  +GI L+  K + L   G     LT +++  +  TGL+V   GM +VGVPVGTE FQR  V     G P EL+R L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D L+ WA++ I+ G
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 212          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.660e-33
Identity = 72/179 (40.22%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  166 LKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +KEF   PP+PGV+ + ++DD+    PP L  +M AI       ++ L  +GI L+  K + L   G+    LT +++  +   GL+V   GM VVG+P GTE+FQR+ V K   G+P EL+  L  + D QAS+Q+LRLS   RL HLL T+ PSI   AA  +D ++ WA++ I+ G
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 179          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 6.010e-31
Identity = 72/179 (40.22%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  166 LKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIE------KKPLGVEGISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +KEF   PP+PGV+ + ++DD+    PP L  +M AI       ++ L  +GI L+  K + L   G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+ V K   G+P EL+  L  + D QAS+Q+LRLS   RL  LL T+ PSI   AA  +D ++ WA++ I+ G
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 179          
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.940e-30
Identity = 72/179 (40.22%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  166 LKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIEKKPLGVEG------ISLNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQFQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVPPSIMCQAAANYDALVEWALASIIAG 684
            +KEF   PP+PG + + ++DD+ V  PP L  ++ AI      ++       I L+  K + L   G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR  V     G P EL+R L  + D QAS+Q+LRLS   RL HLL T  PSI   AA  +D L+ WA++ I+ G
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115609.1233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.610e-5043.59Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JCM0_9PHAE4.820e-4741.99Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE7.320e-4741.99Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE7.520e-4741.99Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KGJ4_9PHAE1.440e-4542.42Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.010e-4340.69Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE4.700e-4241.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE1.660e-3340.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKJ7_9PHAE6.010e-3140.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE4.940e-3040.22Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115609contigH-elongata_contig115609:265..972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size690
Cds size681
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115609.1233.1prot_H-elongata_contig115609.1233.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig115609 274..972 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929670.0734835-UTR-H-elongata_contig115609:264..2731622929670.0734835-UTR-H-elongata_contig115609:264..273Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig115609 265..273 +
1691679113.3027544-UTR-H-elongata_contig115609:264..2731691679113.3027544-UTR-H-elongata_contig115609:264..273Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig115609 265..273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929670.0932124-CDS-H-elongata_contig115609:273..5461622929670.0932124-CDS-H-elongata_contig115609:273..546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115609 274..546 +
1691679113.3167367-CDS-H-elongata_contig115609:273..5461691679113.3167367-CDS-H-elongata_contig115609:273..546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115609 274..546 +
1622929670.1160617-CDS-H-elongata_contig115609:564..9721622929670.1160617-CDS-H-elongata_contig115609:564..972Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115609 565..972 +
1691679113.3257432-CDS-H-elongata_contig115609:564..9721691679113.3257432-CDS-H-elongata_contig115609:564..972Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115609 565..972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig115609.1233.1

>prot_H-elongata_contig115609.1233.1 ID=prot_H-elongata_contig115609.1233.1|Name=mRNA_H-elongata_contig115609.1233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
MVPYTSNFYAREPPELLFALDGRGLEVAESARGVQQGCPLGPLCYSAGSL
KILKEFRANPPMPGVRPVSFIDDITVIPPPELFLDMAAIEKKPLGVEGIS
LNRRKLQALLAYGVGPEQLTEEKRVAMDITGLTVVRQGMRVVGVPVGTEQ
FQRDLVQKAVNGEPTELVRALVPMKDAQASFQILRLSVTSRLSHLLLTVP
PSIMCQAAANYDALVEWALASIIAGD*
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mRNA from alignment at H-elongata_contig115609:265..972+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig115609.1233.1 ID=mRNA_H-elongata_contig115609.1233.1|Name=mRNA_H-elongata_contig115609.1233.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=708bp|location=Sequence derived from alignment at H-elongata_contig115609:265..972+ (Himanthalia elongata Himel1 dioecious)
ATTTCCTCAATGGTCCCCTACACATCTAACTTTTACGCAAGGGAACCCCC AGAACTCCTGTTTGCACTAGATGGTAGAGGTTTGGAAGTGGCTGAATCAG CGCGAGGAGTACAGCAAGGATGCCCTCTAGGCCCACTTTGCTATAGCGCA GGCTCACTGAAGATCCTAAAAGAATTCAGGGCTAATCCACCGATGCCAGG AGTGAGACCGGTTTCGTTCATTGACGACATCACGGTCATCCCACCACCGG AGCTCTTTCTCGATATGGCAGCGATAGAAAAAGTTACGGAATGACTACAG AAACCCCTGGGGGTAGAAGGCATCTCGCTAAACCGAAGAAAGTTGCAGGC CTTGCTAGCATATGGAGTTGGGCCAGAACAACTGACAGAGGAGAAGCGGG TGGCAATGGATATCACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTT GTGGGAGTACCAGTTGGAACAGAACAGTTCCAGCGCGATTTGGTACAGAA GGCGGTTAATGGAGAGCCAACTGAGCTTGTGAGAGCGCTGGTCCCGATGA AGGATGCCCAAGCGAGCTTTCAGATCTTGCGTTTATCTGTCACTTCTCGC CTTTCACATCTCCTTCTAACAGTCCCGCCCTCCATCATGTGCCAAGCTGC AGCAAATTACGACGCCTTGGTGGAGTGGGCTTTGGCGTCTATCATAGCTG GTGACTGA
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Coding sequence (CDS) from alignment at H-elongata_contig115609:265..972+

>mRNA_H-elongata_contig115609.1233.1 ID=mRNA_H-elongata_contig115609.1233.1|Name=mRNA_H-elongata_contig115609.1233.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig115609:265..972+ (Himanthalia elongata Himel1 dioecious)
ATGGTCCCCTACACATCTAACTTTTACGCAAGGGAACCCCCAGAACTCCT
GTTTGCACTAGATGGTAGAGGTTTGGAAGTGGCTGAATCAGCGCGAGGAG
TACAGCAAGGATGCCCTCTAGGCCCACTTTGCTATAGCGCAGGCTCACTG
AAGATCCTAAAAGAATTCAGGGCTAATCCACCGATGCCAGGAGTGAGACC
GGTTTCGTTCATTGACGACATCACGGTCATCCCACCACCGGAGCTCTTTC
TCGATATGGCAGCGATAGAAAAAATGGTCCCCTACACATCTAACTTTTAC
GCAAGGGAACCCCCAGAACTCCTGTTTGCACTAGATGGTAGAGGTTTGGA
AGTGGCTGAATCAGCGCGAGGAGTACAGCAAGGATGCCCTCTAGGCCCAC
TTTGCTATAGCGCAGGCTCACTGAAGATCCTAAAAGAATTCAGGGCTAAT
CCACCGATGCCAGGAGTGAGACCGGTTTCGTTCATTGACGACATCACGGT
CATCCCACCACCGGAGCTCTTTCTCGATATGGCAGCGATAGAAAAAAAAC
CCCTGGGGGTAGAAGGCATCTCGCTAAACCGAAGAAAGTTGCAGGCCTTG
CTAGCATATGGAGTTGGGCCAGAACAACTGACAGAGGAGAAGCGGGTGGC
AATGGATATCACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGG
GAGTACCAGTTGGAACAGAACAGTTCCAGCGCGATTTGGTACAGAAGGCG
GTTAATGGAGAGCCAACTGAGCTTGTGAGAGCGCTGGTCCCGATGAAGGA
TGCCCAAGCGAGCTTTCAGATCTTGCGTTTATCTGTCACTTCTCGCCTTT
CACATCTCCTTCTAACAGTCCCGCCCTCCATCATGTGCCAAGCTGCAGCA
AATTACGACGCCTTGGTGGAGTGGGCTTTGGCGTCTATCATAGCTGGTGA
CTGAAAACCCCTGGGGGTAGAAGGCATCTCGCTAAACCGAAGAAAGTTGC
AGGCCTTGCTAGCATATGGAGTTGGGCCAGAACAACTGACAGAGGAGAAG
CGGGTGGCAATGGATATCACAGGGCTCACGGTGGTCCGACAGGGGATGAG
GGTTGTGGGAGTACCAGTTGGAACAGAACAGTTCCAGCGCGATTTGGTAC
AGAAGGCGGTTAATGGAGAGCCAACTGAGCTTGTGAGAGCGCTGGTCCCG
ATGAAGGATGCCCAAGCGAGCTTTCAGATCTTGCGTTTATCTGTCACTTC
TCGCCTTTCACATCTCCTTCTAACAGTCCCGCCCTCCATCATGTGCCAAG
CTGCAGCAAATTACGACGCCTTGGTGGAGTGGGCTTTGGCGTCTATCATA
GCTGGTGACTGA
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